| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023621
Identifier: 124023621
GI number: 124023621
Start: 1687370
End: 1689232
Strand: Reverse
Name: 124023621
Synonym: P9303_19211
Alternate gene names: NA
Gene position: 1689232-1687370 (Counterclockwise)
Preceding gene: 124023623
Following gene: 124023618
Centisome position: 62.97
GC content: 38.81
Gene sequence:
>1863_bases ATGCCTAACAAGCAAGCTAATATGTCAGCGACAAGCCAGAAGCCGGGAAAGCAAAAAAAGAATTTCCACTTGAGACTTTG GTTAGGAATTCCAGCTGCAATACTTTCGATAAGTCTTTTGGCATATTTCGTCGATAATCTGAAAACTCTGCTTGAAACTT TGCCGGAGAGAGCTTCAAAAGAGGGCAAACAGTTTTTGTCAAATTATGAAATCATTAGCCATGACATATTTTTGATTATT CTAGCATTGGTGCTTTTGGCATTAGTCTATAATTTAGTGAAAAGTTGTTCCGACCTTAAGCTCGTTATTGATAAAAGAAA TATCAAGAAAGTGGTCTCTAATGTCATCAGATACCCTTTCGTTTGCGGAATATTCATCATTTATTTGATTATGATTGTGA ATAATGCAAGCTGGCATTATCCAGAGCTAGTTGGATGGTATTCCGATATATTTGAATATGATCTGCTAGAGAATTTTCGC TTTCTTGATGGTTTTGTTGGCGAGACGATGCGCCGCAATGACTTTAGATTCTTCCCCTTGGCTCATCAAGACATACATCT TTTGAGCTGGCTAACTCCTTATCCAAAAGTCTGGGCGATACTCAATGCTATTGAACTAGCCGTTGTCGTTATTTTTATCA CAAAGTTTGTCAGAAAGCTTACTAATAATTTCCTCCCTTCGCTTTTATTGCTGACGACAGTTCTTGTCCTAATCAATCCT GTGACAGCAGTCGTTTTCTTTCAGTTTGTTTATTCGGAACGACTACTTACAACTGTTTTGGTTGTTTTTATTTACAGTTA CCTTTGCTATCAGCAAACGCAAGAAGATAAATATTTCTACTTGACATTAATAACTGCTCTTCTTGGTATCTTTCTCAAGG ACACAGCTTTTATATTCTTTATTGGACCAGCTGTAATGACCTTGTGCTTAGGTTTTGCAGGGCGAATGACTAATCATACC TATCTGCCCAGATTGGGCTACGAATCATCCCCAGGATCATTTCGCTTGGAGCGCTGGCTGATCTTCTTGATGGCTGCCTA TCTCGTCGCCTATTTCTTCCTGAGCTTCTTACCGAGCACCTATTTACAAAGAGGAATGTATAGTGAAGGCAATCAATTCT CCCTAGTACTTGATGGCAGAATCTTGATGATTTGTCTTGCACTAGTAGTTCGTTTGTGTTTAGTTTTCCTTCGCAAAACT CAGGTTAATCTTGTTGATGCACTAAATGCCTCTGCGATTACATATATTCTGGCCACTTCTTACTTTGTTGATTTTTCAAT GGGCAATCACTTGTCCTTTCCTGTTCAGATCGTTTTTGCGATAGACATTACATATTTTGTTGCCTTGCTGACTCAGAGTT ATTCTTTTAAAAAGTACTTTGGTAAGATGATAGCGACAGCATTTATCTTTGTTGTTGCTTCTTTTGCGGCATTGCTCGAA TGGCCTAGTTTCTTAAGTCGTCTCACGTCGACGAAAACCCGTCAGGATGACTGGGCCTCTACATATTATGCGATTAAGAA GATATCAAAGCAAATGAAGAGAAACGGGCAAGAGGTCAATATCATCTTTGCCAAAGGTTGGTACAACGAACATAGACATT TAAATCGTTTGACCTATGATCGTCTTATTAAGATAGATCCTGCTACAGGAAAATACATTGTCAAGGAAGGAATGGGAAGG AGAGATAAGAGCTACAACTACATGCCAAAAGATGGCGATCTTCTCTTGAACATTGACCGCCAGCAATTCAAGGAACGCTT GCCAATGATAGATTTTAGTTGTTTCCAGTTGCTTTATGATGCAAACCCTAGTGTGGATTATGGCAAAATATATCGTTATA TGCAGAGTGAGTGTTCATCCTAA
Upstream 100 bases:
>100_bases AATGGTTTGCCGCTTTGCCAAGTCAAAGGAAAATATAATAATGAGTCGTCTTAATCACCTACACTGCAGACAATGATGTT GACTGAGGAGAGCAAAGGCC
Downstream 100 bases:
>100_bases GTCGTTGACTCCATTCGATTCTCACAGTTGTTCGCAACTGTTGTTGCTATGTTTGTAATCAATATCTATCTGATTCAGTC ATGATGCTTATTAGGATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 620; Mature: 619
Protein sequence:
>620_residues MPNKQANMSATSQKPGKQKKNFHLRLWLGIPAAILSISLLAYFVDNLKTLLETLPERASKEGKQFLSNYEIISHDIFLII LALVLLALVYNLVKSCSDLKLVIDKRNIKKVVSNVIRYPFVCGIFIIYLIMIVNNASWHYPELVGWYSDIFEYDLLENFR FLDGFVGETMRRNDFRFFPLAHQDIHLLSWLTPYPKVWAILNAIELAVVVIFITKFVRKLTNNFLPSLLLLTTVLVLINP VTAVVFFQFVYSERLLTTVLVVFIYSYLCYQQTQEDKYFYLTLITALLGIFLKDTAFIFFIGPAVMTLCLGFAGRMTNHT YLPRLGYESSPGSFRLERWLIFLMAAYLVAYFFLSFLPSTYLQRGMYSEGNQFSLVLDGRILMICLALVVRLCLVFLRKT QVNLVDALNASAITYILATSYFVDFSMGNHLSFPVQIVFAIDITYFVALLTQSYSFKKYFGKMIATAFIFVVASFAALLE WPSFLSRLTSTKTRQDDWASTYYAIKKISKQMKRNGQEVNIIFAKGWYNEHRHLNRLTYDRLIKIDPATGKYIVKEGMGR RDKSYNYMPKDGDLLLNIDRQQFKERLPMIDFSCFQLLYDANPSVDYGKIYRYMQSECSS
Sequences:
>Translated_620_residues MPNKQANMSATSQKPGKQKKNFHLRLWLGIPAAILSISLLAYFVDNLKTLLETLPERASKEGKQFLSNYEIISHDIFLII LALVLLALVYNLVKSCSDLKLVIDKRNIKKVVSNVIRYPFVCGIFIIYLIMIVNNASWHYPELVGWYSDIFEYDLLENFR FLDGFVGETMRRNDFRFFPLAHQDIHLLSWLTPYPKVWAILNAIELAVVVIFITKFVRKLTNNFLPSLLLLTTVLVLINP VTAVVFFQFVYSERLLTTVLVVFIYSYLCYQQTQEDKYFYLTLITALLGIFLKDTAFIFFIGPAVMTLCLGFAGRMTNHT YLPRLGYESSPGSFRLERWLIFLMAAYLVAYFFLSFLPSTYLQRGMYSEGNQFSLVLDGRILMICLALVVRLCLVFLRKT QVNLVDALNASAITYILATSYFVDFSMGNHLSFPVQIVFAIDITYFVALLTQSYSFKKYFGKMIATAFIFVVASFAALLE WPSFLSRLTSTKTRQDDWASTYYAIKKISKQMKRNGQEVNIIFAKGWYNEHRHLNRLTYDRLIKIDPATGKYIVKEGMGR RDKSYNYMPKDGDLLLNIDRQQFKERLPMIDFSCFQLLYDANPSVDYGKIYRYMQSECSS >Mature_619_residues PNKQANMSATSQKPGKQKKNFHLRLWLGIPAAILSISLLAYFVDNLKTLLETLPERASKEGKQFLSNYEIISHDIFLIIL ALVLLALVYNLVKSCSDLKLVIDKRNIKKVVSNVIRYPFVCGIFIIYLIMIVNNASWHYPELVGWYSDIFEYDLLENFRF LDGFVGETMRRNDFRFFPLAHQDIHLLSWLTPYPKVWAILNAIELAVVVIFITKFVRKLTNNFLPSLLLLTTVLVLINPV TAVVFFQFVYSERLLTTVLVVFIYSYLCYQQTQEDKYFYLTLITALLGIFLKDTAFIFFIGPAVMTLCLGFAGRMTNHTY LPRLGYESSPGSFRLERWLIFLMAAYLVAYFFLSFLPSTYLQRGMYSEGNQFSLVLDGRILMICLALVVRLCLVFLRKTQ VNLVDALNASAITYILATSYFVDFSMGNHLSFPVQIVFAIDITYFVALLTQSYSFKKYFGKMIATAFIFVVASFAALLEW PSFLSRLTSTKTRQDDWASTYYAIKKISKQMKRNGQEVNIIFAKGWYNEHRHLNRLTYDRLIKIDPATGKYIVKEGMGRR DKSYNYMPKDGDLLLNIDRQQFKERLPMIDFSCFQLLYDANPSVDYGKIYRYMQSECSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71829; Mature: 71698
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNKQANMSATSQKPGKQKKNFHLRLWLGIPAAILSISLLAYFVDNLKTLLETLPERASK CCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGKQFLSNYEIISHDIFLIILALVLLALVYNLVKSCSDLKLVIDKRNIKKVVSNVIRYPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH VCGIFIIYLIMIVNNASWHYPELVGWYSDIFEYDLLENFRFLDGFVGETMRRNDFRFFPL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC AHQDIHLLSWLTPYPKVWAILNAIELAVVVIFITKFVRKLTNNFLPSLLLLTTVLVLINP CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTAVVFFQFVYSERLLTTVLVVFIYSYLCYQQTQEDKYFYLTLITALLGIFLKDTAFIFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH IGPAVMTLCLGFAGRMTNHTYLPRLGYESSPGSFRLERWLIFLMAAYLVAYFFLSFLPST HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YLQRGMYSEGNQFSLVLDGRILMICLALVVRLCLVFLRKTQVNLVDALNASAITYILATS HHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH YFVDFSMGNHLSFPVQIVFAIDITYFVALLTQSYSFKKYFGKMIATAFIFVVASFAALLE HHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WPSFLSRLTSTKTRQDDWASTYYAIKKISKQMKRNGQEVNIIFAKGWYNEHRHLNRLTYD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHH RLIKIDPATGKYIVKEGMGRRDKSYNYMPKDGDLLLNIDRQQFKERLPMIDFSCFQLLYD HEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHC ANPSVDYGKIYRYMQSECSS CCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PNKQANMSATSQKPGKQKKNFHLRLWLGIPAAILSISLLAYFVDNLKTLLETLPERASK CCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGKQFLSNYEIISHDIFLIILALVLLALVYNLVKSCSDLKLVIDKRNIKKVVSNVIRYPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH VCGIFIIYLIMIVNNASWHYPELVGWYSDIFEYDLLENFRFLDGFVGETMRRNDFRFFPL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC AHQDIHLLSWLTPYPKVWAILNAIELAVVVIFITKFVRKLTNNFLPSLLLLTTVLVLINP CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTAVVFFQFVYSERLLTTVLVVFIYSYLCYQQTQEDKYFYLTLITALLGIFLKDTAFIFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH IGPAVMTLCLGFAGRMTNHTYLPRLGYESSPGSFRLERWLIFLMAAYLVAYFFLSFLPST HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YLQRGMYSEGNQFSLVLDGRILMICLALVVRLCLVFLRKTQVNLVDALNASAITYILATS HHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH YFVDFSMGNHLSFPVQIVFAIDITYFVALLTQSYSFKKYFGKMIATAFIFVVASFAALLE HHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WPSFLSRLTSTKTRQDDWASTYYAIKKISKQMKRNGQEVNIIFAKGWYNEHRHLNRLTYD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHH RLIKIDPATGKYIVKEGMGRRDKSYNYMPKDGDLLLNIDRQQFKERLPMIDFSCFQLLYD HEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHC ANPSVDYGKIYRYMQSECSS CCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA