| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023607
Identifier: 124023607
GI number: 124023607
Start: 1670336
End: 1672345
Strand: Direct
Name: 124023607
Synonym: P9303_19071
Alternate gene names: NA
Gene position: 1670336-1672345 (Clockwise)
Preceding gene: 124023604
Following gene: 124023608
Centisome position: 62.26
GC content: 37.81
Gene sequence:
>2010_bases ATGGCTTATTCAGTTAACAATATAAATGAGCTTATTCCATGGGGCTTGAATCCAACATGGGTCGATAATCAACTAAACCA TACCTGGCACACAGGGACTCATGCAGTAGCCTACCATCACAATCACTGGGCTTATCACAGCAATGGCAACACACAGGTCA ACACATATGTAGAGGATGTAAAATATGGATCCGGTCAGACATTTAATAAGTCTATTTGGAACACTTATGCAGCCGGAACA AAAGGAATTAGAGGCAATCAGGTTCGTGAAAATGGTGGTTATGGATTAAATGCAAATATTGATGGTGCTATTACTCTATC TCAGGAGGTTGGCTCAGTTACGTTAGGGCAGCCCACTGGACATATTCAAGCTAATGGTGGTGCATCCTCAGAGTCTAGTT CATCTAATACTGTCAGAAATACCTCTTCTGCTCCAATAACATCATCAGTAGAGATCACAAAAACCACCTCTGATTCATCA CAAAGCAGTACAACCTCTGGCTACACTCAAGGGCATACACTGGAGATTGGCACATCGCTAAAAACTAAGATCACGGCAGG TGTTGAAGGAATTGCCAGTGCAAGTACGGAAATCGGACTTAATGTTAACAACACACTTTCAACAAGTATAAACAGCAGCA CTACTGCAGAAACAAGTAATTCAACAACTAACACCTTTACTCGCAAAGTAGCAGTAACTGTAGACCCTGGTCAAGCAGTA AATGTTTTTCTTACATGGGACACTCAAAAGATTAATGTCCCATGGACATCACCAATTCATGCGGTTGGTAGTTCTACTTA CTGGGATAAATATGGAAATAAAATTCCTTACCACGTTGGAGATGCAATGGGTGAAGCAAAGAAATTTGGCGTTCCTAATT CTCATTTAATATTCGGCACGACGGGTGACGTATCTGATTTTGTTGCCTCAGGAATGATTAAAAATGTCAATAATTACAAT TTCAACGTAAGCGCTAGAAATATCGTACCAAGTAACACTGCTACATCGCTCAAAGGATCGAGCTTAGATAAAAATATAGA TCATACTAAGTTATCAATAAATAGTCACGATGCACATTCAGCATCAACAGTATATCTCGATGGCATCTTAACACATATCG GTCGAGAATATAGAGCAAATGATCATACTGAAAATGGCAAGATTTTGAAAGGTACGAATAAAGCAGACCTGATTGAACTA GGTGGAAAAAATCAGGTTGCCTATACATTTGGCGGTAATGATCAGGTACTTGGATCAGTACATGCAGATAAAATTTATTC ACAAGGCAACGGAATTGGCGGTAATGTATTTGAATCTGGCGATGGTGATGACTATATAGAAAGTTATGATGGATCAGATT ATATAGATGCAGGAAATGGTAATGATAAAGTTATTGTCAGTGGAGAATCTGGAAAGCTTGATGATATTACACTTGGAAAT GGTAAAGACAGCCTAGAGATAAAATTAGATAATAATATTGATGGGGTAGGTTTTATTATTAGAGATGCATCATTAGAAGA CTCTATAAATATACATGGCTCCAACAGAGAACTCCATATTAAAACATTTGGAGATACAGTTGAAGTGCATGCTGGAGGCG ATCAGATTGGATTGCTTCATAACTATGCATCTTACTTTGACTTCGCAGGCAATGAATTATTAAACGTTGGTGTTATGAAC GGAACCAAGTTAAGAAGTGAGAAATTAAGCAATGAGAACCTGGAAGGGTGGTGGGATGAAATTGTTACTTCAAGTATTAA AGGTAATGATATTATAACAGACTACAGCCAATTCATATCAGATGAGGCCTATTTCAAAGACAACATAAGAAGATGTTTAA ATCATTACCTTGGAGGTGAACTTACCCCAACAGATGAAATAACAATAGGAACTGTTGCAAACACAGCTTATAACTTAAGA GATCAATATAATGATGTTTCAAATCTGTTAATGGCGAGCCTTGAGAAGGATAATATATCTATTGGATATTTCAATGATCC ACTCGCATGA
Upstream 100 bases:
>100_bases GCCCTGAGGATATTTTAAACCAAATATAAACATTGATATCAATGCGTTGCATAGCAATGTTAAATCGGCTACATTAAGGG GTGTAGATTGATCTTAGGCC
Downstream 100 bases:
>100_bases TATTCGAGCAGATCATTAGAACAGAACATTTAAATAATTAATTCCCAACTACACCTAATACAACTTCCACATAAAAAATA ACCAATAGATTACACAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 669; Mature: 668
Protein sequence:
>669_residues MAYSVNNINELIPWGLNPTWVDNQLNHTWHTGTHAVAYHHNHWAYHSNGNTQVNTYVEDVKYGSGQTFNKSIWNTYAAGT KGIRGNQVRENGGYGLNANIDGAITLSQEVGSVTLGQPTGHIQANGGASSESSSSNTVRNTSSAPITSSVEITKTTSDSS QSSTTSGYTQGHTLEIGTSLKTKITAGVEGIASASTEIGLNVNNTLSTSINSSTTAETSNSTTNTFTRKVAVTVDPGQAV NVFLTWDTQKINVPWTSPIHAVGSSTYWDKYGNKIPYHVGDAMGEAKKFGVPNSHLIFGTTGDVSDFVASGMIKNVNNYN FNVSARNIVPSNTATSLKGSSLDKNIDHTKLSINSHDAHSASTVYLDGILTHIGREYRANDHTENGKILKGTNKADLIEL GGKNQVAYTFGGNDQVLGSVHADKIYSQGNGIGGNVFESGDGDDYIESYDGSDYIDAGNGNDKVIVSGESGKLDDITLGN GKDSLEIKLDNNIDGVGFIIRDASLEDSINIHGSNRELHIKTFGDTVEVHAGGDQIGLLHNYASYFDFAGNELLNVGVMN GTKLRSEKLSNENLEGWWDEIVTSSIKGNDIITDYSQFISDEAYFKDNIRRCLNHYLGGELTPTDEITIGTVANTAYNLR DQYNDVSNLLMASLEKDNISIGYFNDPLA
Sequences:
>Translated_669_residues MAYSVNNINELIPWGLNPTWVDNQLNHTWHTGTHAVAYHHNHWAYHSNGNTQVNTYVEDVKYGSGQTFNKSIWNTYAAGT KGIRGNQVRENGGYGLNANIDGAITLSQEVGSVTLGQPTGHIQANGGASSESSSSNTVRNTSSAPITSSVEITKTTSDSS QSSTTSGYTQGHTLEIGTSLKTKITAGVEGIASASTEIGLNVNNTLSTSINSSTTAETSNSTTNTFTRKVAVTVDPGQAV NVFLTWDTQKINVPWTSPIHAVGSSTYWDKYGNKIPYHVGDAMGEAKKFGVPNSHLIFGTTGDVSDFVASGMIKNVNNYN FNVSARNIVPSNTATSLKGSSLDKNIDHTKLSINSHDAHSASTVYLDGILTHIGREYRANDHTENGKILKGTNKADLIEL GGKNQVAYTFGGNDQVLGSVHADKIYSQGNGIGGNVFESGDGDDYIESYDGSDYIDAGNGNDKVIVSGESGKLDDITLGN GKDSLEIKLDNNIDGVGFIIRDASLEDSINIHGSNRELHIKTFGDTVEVHAGGDQIGLLHNYASYFDFAGNELLNVGVMN GTKLRSEKLSNENLEGWWDEIVTSSIKGNDIITDYSQFISDEAYFKDNIRRCLNHYLGGELTPTDEITIGTVANTAYNLR DQYNDVSNLLMASLEKDNISIGYFNDPLA >Mature_668_residues AYSVNNINELIPWGLNPTWVDNQLNHTWHTGTHAVAYHHNHWAYHSNGNTQVNTYVEDVKYGSGQTFNKSIWNTYAAGTK GIRGNQVRENGGYGLNANIDGAITLSQEVGSVTLGQPTGHIQANGGASSESSSSNTVRNTSSAPITSSVEITKTTSDSSQ SSTTSGYTQGHTLEIGTSLKTKITAGVEGIASASTEIGLNVNNTLSTSINSSTTAETSNSTTNTFTRKVAVTVDPGQAVN VFLTWDTQKINVPWTSPIHAVGSSTYWDKYGNKIPYHVGDAMGEAKKFGVPNSHLIFGTTGDVSDFVASGMIKNVNNYNF NVSARNIVPSNTATSLKGSSLDKNIDHTKLSINSHDAHSASTVYLDGILTHIGREYRANDHTENGKILKGTNKADLIELG GKNQVAYTFGGNDQVLGSVHADKIYSQGNGIGGNVFESGDGDDYIESYDGSDYIDAGNGNDKVIVSGESGKLDDITLGNG KDSLEIKLDNNIDGVGFIIRDASLEDSINIHGSNRELHIKTFGDTVEVHAGGDQIGLLHNYASYFDFAGNELLNVGVMNG TKLRSEKLSNENLEGWWDEIVTSSIKGNDIITDYSQFISDEAYFKDNIRRCLNHYLGGELTPTDEITIGTVANTAYNLRD QYNDVSNLLMASLEKDNISIGYFNDPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71998; Mature: 71867
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSVNNINELIPWGLNPTWVDNQLNHTWHTGTHAVAYHHNHWAYHSNGNTQVNTYVEDV CCEECCCHHHHCCCCCCCCEECCCCCCEEECCCEEEEEECCCEEEECCCCCEEEEEEEEE KYGSGQTFNKSIWNTYAAGTKGIRGNQVRENGGYGLNANIDGAITLSQEVGSVTLGQPTG ECCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCEEECCCCCEEEEEECCCCEEEECCCCC HIQANGGASSESSSSNTVRNTSSAPITSSVEITKTTSDSSQSSTTSGYTQGHTLEIGTSL EEEECCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCC KTKITAGVEGIASASTEIGLNVNNTLSTSINSSTTAETSNSTTNTFTRKVAVTVDPGQAV EEEEECCCCCHHCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEE NVFLTWDTQKINVPWTSPIHAVGSSTYWDKYGNKIPYHVGDAMGEAKKFGVPNSHLIFGT EEEEEECCEEEECCCCCCHHHCCCCCCHHHHCCCCCCHHCHHHCCHHHCCCCCCCEEEEC TGDVSDFVASGMIKNVNNYNFNVSARNIVPSNTATSLKGSSLDKNIDHTKLSINSHDAHS CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC ASTVYLDGILTHIGREYRANDHTENGKILKGTNKADLIELGGKNQVAYTFGGNDQVLGSV CCEEEHHHHHHHCCHHHCCCCCCCCCCEEECCCCCEEEEECCCCEEEEEECCCCEEEEEE HADKIYSQGNGIGGNVFESGDGDDYIESYDGSDYIDAGNGNDKVIVSGESGKLDDITLGN HHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCEEEEECCCCCCCEEEECC GKDSLEIKLDNNIDGVGFIIRDASLEDSINIHGSNRELHIKTFGDTVEVHAGGDQIGLLH CCCEEEEEECCCCCCEEEEEEECCCCCCEEEECCCCEEEEEEECCEEEEECCCCEEEHHH NYASYFDFAGNELLNVGVMNGTKLRSEKLSNENLEGWWDEIVTSSIKGNDIITDYSQFIS HHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHC DEAYFKDNIRRCLNHYLGGELTPTDEITIGTVANTAYNLRDQYNDVSNLLMASLEKDNIS CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEE IGYFNDPLA EEECCCCCC >Mature Secondary Structure AYSVNNINELIPWGLNPTWVDNQLNHTWHTGTHAVAYHHNHWAYHSNGNTQVNTYVEDV CEECCCHHHHCCCCCCCCEECCCCCCEEECCCEEEEEECCCEEEECCCCCEEEEEEEEE KYGSGQTFNKSIWNTYAAGTKGIRGNQVRENGGYGLNANIDGAITLSQEVGSVTLGQPTG ECCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCEEECCCCCEEEEEECCCCEEEECCCCC HIQANGGASSESSSSNTVRNTSSAPITSSVEITKTTSDSSQSSTTSGYTQGHTLEIGTSL EEEECCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCC KTKITAGVEGIASASTEIGLNVNNTLSTSINSSTTAETSNSTTNTFTRKVAVTVDPGQAV EEEEECCCCCHHCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEE NVFLTWDTQKINVPWTSPIHAVGSSTYWDKYGNKIPYHVGDAMGEAKKFGVPNSHLIFGT EEEEEECCEEEECCCCCCHHHCCCCCCHHHHCCCCCCHHCHHHCCHHHCCCCCCCEEEEC TGDVSDFVASGMIKNVNNYNFNVSARNIVPSNTATSLKGSSLDKNIDHTKLSINSHDAHS CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC ASTVYLDGILTHIGREYRANDHTENGKILKGTNKADLIELGGKNQVAYTFGGNDQVLGSV CCEEEHHHHHHHCCHHHCCCCCCCCCCEEECCCCCEEEEECCCCEEEEEECCCCEEEEEE HADKIYSQGNGIGGNVFESGDGDDYIESYDGSDYIDAGNGNDKVIVSGESGKLDDITLGN HHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCEEEEECCCCCCCEEEECC GKDSLEIKLDNNIDGVGFIIRDASLEDSINIHGSNRELHIKTFGDTVEVHAGGDQIGLLH CCCEEEEEECCCCCCEEEEEEECCCCCCEEEECCCCEEEEEEECCEEEEECCCCEEEHHH NYASYFDFAGNELLNVGVMNGTKLRSEKLSNENLEGWWDEIVTSSIKGNDIITDYSQFIS HHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHC DEAYFKDNIRRCLNHYLGGELTPTDEITIGTVANTAYNLRDQYNDVSNLLMASLEKDNIS CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEE IGYFNDPLA EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA