| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is comB
Identifier: 124023591
GI number: 124023591
Start: 1653468
End: 1654199
Strand: Direct
Name: comB
Synonym: P9303_18911
Alternate gene names: 124023591
Gene position: 1653468-1654199 (Clockwise)
Preceding gene: 124023586
Following gene: 124023592
Centisome position: 61.64
GC content: 54.92
Gene sequence:
>732_bases ATGCAGCTCGCTTATTTCCATGTGGCAGCGGATGTGCCTCAGGGGGCTGAGCCTGATGCGGCTGTCGTCATCGACGTTCT CAGAGCCACCACCACCATCGCCTGGGCTTTAAACAACGGTGCCGAAGCTGTTGAAACCTTTGCTGATTTGGACCAACTGA GGCAAAGCGCGGCTCAATGGCCGGAGTCTTCCCGTTTGATGCTTGGTGAGCGAGGCGGACAGCGCATTGAGGGATTTGAT CTGGGGAATTCCCCCGTCGCTGTGGTGCCCGAGCAAGTGGCTGGCAAAAGACTATTTATGAGCACGACTAACGGCACGCG CTCTTTGCAGCGAGTGCGTGGGGTTCAGCGTTTATTCACTTTGGCACTACCAAACCGCAGAGCTGTTGCAGACCACTTGT TGATGGATCCACCTGAGCAACTTTGGATTGTTGGTAGTGGCTGGGAAGGGGCCTACTCCCTGGAGGATTCTTTGGCGGCC GGAGCATTAGCCGATTTGCTATTGAATGCTGCCGCTGATGAGGCTTGTGTCGTGAACGACGAACTCACTGCTGCACTAGC CCTTTGGCAGCAGTGGAAGCACGATCCAGAAGCCTGTCTTCGTCAAGCCAGCCATGGGCAACGCTTAATTGGGCTTGGCG ATCACGATGCAGATTTCAGATGTTGTGCTGAATTGGATCGGCTTTCTGTGGTTCCTGTTCAGGTCAAACCCGGAGTCCTT TGTGCCTCTTGA
Upstream 100 bases:
>100_bases GTCTTGGGACGCAGGTCCGGGACGAAGCAGGGGCATGGTTGGTAAGACAGCCAGCAAAATGATCTAGTTACTGTGGCGCA CGTCGTTCCCTATCGAGGCC
Downstream 100 bases:
>100_bases AACCACACTGCGATCTAAAGTTTCGCTCTCTGTTTCAACCCTGTGACCGACTTTCTGGCAGCCGCTTTGCAGCTGACGAG CACCTCGGAACCAGAGCTCA
Product: 2-phosphosulfolactate phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQWPESSRLMLGERGGQRIEGFD LGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFTLALPNRRAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAA GALADLLLNAAADEACVVNDELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL CAS
Sequences:
>Translated_243_residues MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQWPESSRLMLGERGGQRIEGFD LGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFTLALPNRRAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAA GALADLLLNAAADEACVVNDELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL CAS >Mature_243_residues MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQWPESSRLMLGERGGQRIEGFD LGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFTLALPNRRAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAA GALADLLLNAAADEACVVNDELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL CAS
Specific function: Unknown
COG id: COG2045
COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COMB_PROM3 (A2CAX3)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001017898.1 - STRING: A2CAX3 - GeneID: 4777960 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_18911 - eggNOG: COG2045 - HOGENOM: HBG633644 - OMA: HDPEACL - ProtClustDB: PRK00886 - HAMAP: MF_00490 - InterPro: IPR005238 - InterPro: IPR022995 - Gene3D: G3DSA:3.90.1560.10
Pfam domain/function: PF04029 2-ph_phosp
EC number: =3.1.3.71
Molecular weight: Translated: 26204; Mature: 26204
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQW CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCC PESSRLMLGERGGQRIEGFDLGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFT CCCCCEEEECCCCCEEECEECCCCCEEECCHHHCCCEEEEECCCCHHHHHHHHHHHHHHH LALPNRRAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAAGALADLLLNAAADEACVVND HHCCCCHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECH ELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL HHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCEE CAS ECC >Mature Secondary Structure MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQW CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCC PESSRLMLGERGGQRIEGFDLGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFT CCCCCEEEECCCCCEEECEECCCCCEEECCHHHCCCEEEEECCCCHHHHHHHHHHHHHHH LALPNRRAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAAGALADLLLNAAADEACVVND HHCCCCHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECH ELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL HHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCEE CAS ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA