| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is yfcK [C]
Identifier: 124023588
GI number: 124023588
Start: 1649443
End: 1650384
Strand: Reverse
Name: yfcK [C]
Synonym: P9303_18881
Alternate gene names: 124023588
Gene position: 1650384-1649443 (Counterclockwise)
Preceding gene: 124023589
Following gene: 124023587
Centisome position: 61.52
GC content: 52.34
Gene sequence:
>942_bases TTGAGCGGCTGCATCGCTGAGTCGCTTCCTCTCGGAACGCTGTCTGCTTATGCAACAGCTGACGGCAGTTTCAGCCTGTA CAGCAGTCATTTTAACGAGGCCTTTCATAGTTCAGCTGGAGCCCTCACAGAAGCCCATGCAAAGTTCGTTGACCCTGCAC AGTTGGAACGCTTCTCTGGCAGCAAACAACTCAGAGTTCTAGATGTATGTGTGGGGCTTGGTTATAACTCAGCTGCCTTA ATTGATGCTCTGCAGGGAAATTCAATCAGCCTGCAGTGGTTTGGATTGGAACTTGACCACAGACCATTGACTATGGCGTT GCAACAGTCGAGCTTCAAGACAATATGGTCTCCTCAAGTGTTGACGATCTTGGAAAGGATTCGTGATTGCAATAGTTGGC GAGAGGGGACCAGCAACGGCACTCTGTTTTGGGGAGACGCCAGGCAAAAACTAAATTGGCTCCCGAATGATCTCAAGATC GATCTGATCCTCATGGATGCCTTCTCTCCAAGCTGCTGTCCACAGCTATGGAGCGATGAATTTCTGACGGCCCTCGCTAG AAAACTGGCGCCAGGAGGACGGCTGCTCACTTACTGCCGGGCCGCTGCAGTCAGAGCAAGCCTGCGTAGAGCGGGCTTGC AATTGCGTTCATTATTGACAGTTCCTGGGGAACGACAAGGTTGGAGCGCTGGCACTTTGGCCATCCTTCCTGATCAACAT GAAGCCACATCCTCTCAAGGCCCAAATTGGCAACCTTTAAGTCTGATGGAGGAGGAACATCTACTCACCCGCGCCGCTAT TCCCTATCGAGATCCCAGTGGCCAAGCCACAGTCGAGGAGATCATCAAGCGCAGAAGAGAAGAGCAACGAGAGTGCAAGA TGGAAAGCACCAACGCATGGAAAAGACGGTGGTGCCGGAACCGAACGGGCGAATGCCAGTAG
Upstream 100 bases:
>100_bases GCCATGAGCCTGGCGGTGGCTGCGTTGTTGGCGGAGGGCAATTCTCGCTTGACGGGTAGCGAAGCTGCGGCTGTTTCCTA CCCCAACTTCTGGGACGACC
Downstream 100 bases:
>100_bases ATTCCGGCCGATTCGCCATTCGCTCCATGCTTGCCGTCGCCATCTTGGCTGCTGGGAAGGGCACCCGCATGAAGAGCTGC CTGCCGAAAGTCTTGCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSGCIAESLPLGTLSAYATADGSFSLYSSHFNEAFHSSAGALTEAHAKFVDPAQLERFSGSKQLRVLDVCVGLGYNSAAL IDALQGNSISLQWFGLELDHRPLTMALQQSSFKTIWSPQVLTILERIRDCNSWREGTSNGTLFWGDARQKLNWLPNDLKI DLILMDAFSPSCCPQLWSDEFLTALARKLAPGGRLLTYCRAAAVRASLRRAGLQLRSLLTVPGERQGWSAGTLAILPDQH EATSSQGPNWQPLSLMEEEHLLTRAAIPYRDPSGQATVEEIIKRRREEQRECKMESTNAWKRRWCRNRTGECQ
Sequences:
>Translated_313_residues MSGCIAESLPLGTLSAYATADGSFSLYSSHFNEAFHSSAGALTEAHAKFVDPAQLERFSGSKQLRVLDVCVGLGYNSAAL IDALQGNSISLQWFGLELDHRPLTMALQQSSFKTIWSPQVLTILERIRDCNSWREGTSNGTLFWGDARQKLNWLPNDLKI DLILMDAFSPSCCPQLWSDEFLTALARKLAPGGRLLTYCRAAAVRASLRRAGLQLRSLLTVPGERQGWSAGTLAILPDQH EATSSQGPNWQPLSLMEEEHLLTRAAIPYRDPSGQATVEEIIKRRREEQRECKMESTNAWKRRWCRNRTGECQ >Mature_312_residues SGCIAESLPLGTLSAYATADGSFSLYSSHFNEAFHSSAGALTEAHAKFVDPAQLERFSGSKQLRVLDVCVGLGYNSAALI DALQGNSISLQWFGLELDHRPLTMALQQSSFKTIWSPQVLTILERIRDCNSWREGTSNGTLFWGDARQKLNWLPNDLKID LILMDAFSPSCCPQLWSDEFLTALARKLAPGGRLLTYCRAAAVRASLRRAGLQLRSLLTVPGERQGWSAGTLAILPDQHE ATSSQGPNWQPLSLMEEEHLLTRAAIPYRDPSGQATVEEIIKRRREEQRECKMESTNAWKRRWCRNRTGECQ
Specific function: Unknown
COG id: COG4121
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008471 [H]
Pfam domain/function: PF05430 DUF752 [H]
EC number: NA
Molecular weight: Translated: 34914; Mature: 34783
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGCIAESLPLGTLSAYATADGSFSLYSSHFNEAFHSSAGALTEAHAKFVDPAQLERFSG CCCCCCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCC SKQLRVLDVCVGLGYNSAALIDALQGNSISLQWFGLELDHRPLTMALQQSSFKTIWSPQV CCCEEEEEHHHHCCCCHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHCCCHHHCCCHH LTILERIRDCNSWREGTSNGTLFWGDARQKLNWLPNDLKIDLILMDAFSPSCCPQLWSDE HHHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHH FLTALARKLAPGGRLLTYCRAAAVRASLRRAGLQLRSLLTVPGERQGWSAGTLAILPDQH HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC EATSSQGPNWQPLSLMEEEHLLTRAAIPYRDPSGQATVEEIIKRRREEQRECKMESTNAW CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH KRRWCRNRTGECQ HHHHHCCCCCCCC >Mature Secondary Structure SGCIAESLPLGTLSAYATADGSFSLYSSHFNEAFHSSAGALTEAHAKFVDPAQLERFSG CCCCCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCC SKQLRVLDVCVGLGYNSAALIDALQGNSISLQWFGLELDHRPLTMALQQSSFKTIWSPQV CCCEEEEEHHHHCCCCHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHCCCHHHCCCHH LTILERIRDCNSWREGTSNGTLFWGDARQKLNWLPNDLKIDLILMDAFSPSCCPQLWSDE HHHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHH FLTALARKLAPGGRLLTYCRAAAVRASLRRAGLQLRSLLTVPGERQGWSAGTLAILPDQH HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC EATSSQGPNWQPLSLMEEEHLLTRAAIPYRDPSGQATVEEIIKRRREEQRECKMESTNAW CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH KRRWCRNRTGECQ HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]