| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is cocE [H]
Identifier: 124023539
GI number: 124023539
Start: 1598749
End: 1600392
Strand: Reverse
Name: cocE [H]
Synonym: P9303_18391
Alternate gene names: 124023539
Gene position: 1600392-1598749 (Counterclockwise)
Preceding gene: 124023540
Following gene: 124023538
Centisome position: 59.66
GC content: 56.45
Gene sequence:
>1644_bases ATGTGCGTTGAAGGTCGAACGAGCTCTGGATCCGTGAACTGGCACGATGCCTGGCTGACACTCTCTGACGGGGTCAAGCT CGTTGCCAGGTTATGGGTCCCGAAGGGTGAGGGACCCTGGCCTGCTCTCGTGATGCGTCAGCCCTACGGACGTGCGCTCG CCTCAACGGTGACTTACATCCATCCTGGTTGGTGGGCAAGTCACGGCTATCTGGTCGTGGTCCAGGACGTACGTGGTCAA GGGGATTCCGAAGGCCACTTCAATGGCTTCCTGCAAGAAGCTTCTGATACCAGTCAGACGCATGCATGGGTTCGGGAGTT GCCAGAATGCAATGGCCGTCTTGGAACCTATGGGTTTTCCTATCAGGGCCTAACACAGCTGCTTGCCGAACCCGGGACGC CGCCACCGGACTGTCTGGCACCAGCGATGGCAGGAGTTGATGAGCGCAACCATTGGAGTTGTGAGGGAGGTGCTCACTGG TGGCATCTTGGCTTGGCCTGGGGGCTGCAACTTGCAGCACTACAAGCTCGTCGCTGTGGCAACTGGGAAGCATGGAGAGA GCTTCGCCGCAGTTTGGAAGACGACAGCTACCTGTATGAGGGTCCGGCACTTCTGAAACGCCACGATCCCGATGGAATGA GCTTGAGATGGCTACAACAAGCGAGCCAAAACGATCAAGGCTGGGTTGTACACAAGCCCTTGGATTCCTGGCTGCGTCAA CCGATGCTGCTTCTGGGTGGCTGGTGGGACCCCCATTTGAATGGCTTGCTTGATCTCTATCAACGATCAAGCCAAGTAGG TGGTAGTCCAGAACTTCACATCGGTCCAGCGACTCACCTGCAGTGGTGGCCTGATGCACAGCAACTTCAGCTGGAGTTCT TTGATCGCCATCTGCAATCTTCGAAAGCCTTAACGAATTCAAGACCCCATGGGCGGATCTGGAATATCACGTCTTGTTCT TGGCAGAGATTTGTAAGCCCCACCCAGACCACAACATCAGCCCATGCCGGCTGGAGTCTTGTCAGTGGAGGGATGGCCTG CTTGGACCCCTCAGAAGGCGCCCTGCATCAGAACAAGGAAGGTGGCGGCGTGGTTTATGTGGTCCATGACCCTTGGCGAC CGGTTCAAGCAGTGGGAGGACATCTCAGCCCAAAACCAGGAGTTGCTGAGCGCAGCGCCGTGGACCAGCGCGCCGATGTG GCTACCTTCACAAGCACTGCTTTGCAGGAACCTCTCCAACTCAATGGGATCCCATTACTGCAGCTGACCGTGCAGTCAGA TCAACCGGGATTTGACCTTTGCGTTGCCTTCTCCATTGTTAATCGCAGCCACAGCGAGGTGAAGCAGCTCTCAACAGGTT TTCTGCGTGTGCAAGGAGAGCAGGCCCTGCGCATGCTGCCGCGCAAGGTGAAACTTCAACCAATATTTGCAGACCTGCAG CGAGGAGAACATCTGCGCCTATCTCTCGCAGGCGCTGCCTGGCCGGCCATTGGTGTCAACCCAGGCCACGATCGTCATCC CTGTGGCCCTCCAGGACCCCATTGCCAAGTGGTGACCATGACACTGCAGCTCAATGGATCCAAGTTGAGGCTTTTGCCAT GGAACTCCGGCAAAATAGATTTCGATTTGCCCCAAGAGTTTTGA
Upstream 100 bases:
>100_bases TATTCATCTCAAGCGATCTCAGAAGTCGCCCGCCAACGCAATCTCAGCTCCAATAACGCTGAGATTCTGGCCACCTATGT GATTGGAATGAACTGCCCGG
Downstream 100 bases:
>100_bases AGCTGTCTGTTTGCCTGCTGAGCCTATCCCTTGGATTGCCCATGGGCCTGAGTGCACTAACCCTTCCGACTGTGGCAGCG CAGGAGACCATTCAAAAGAC
Product: acyl esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MCVEGRTSSGSVNWHDAWLTLSDGVKLVARLWVPKGEGPWPALVMRQPYGRALASTVTYIHPGWWASHGYLVVVQDVRGQ GDSEGHFNGFLQEASDTSQTHAWVRELPECNGRLGTYGFSYQGLTQLLAEPGTPPPDCLAPAMAGVDERNHWSCEGGAHW WHLGLAWGLQLAALQARRCGNWEAWRELRRSLEDDSYLYEGPALLKRHDPDGMSLRWLQQASQNDQGWVVHKPLDSWLRQ PMLLLGGWWDPHLNGLLDLYQRSSQVGGSPELHIGPATHLQWWPDAQQLQLEFFDRHLQSSKALTNSRPHGRIWNITSCS WQRFVSPTQTTTSAHAGWSLVSGGMACLDPSEGALHQNKEGGGVVYVVHDPWRPVQAVGGHLSPKPGVAERSAVDQRADV ATFTSTALQEPLQLNGIPLLQLTVQSDQPGFDLCVAFSIVNRSHSEVKQLSTGFLRVQGEQALRMLPRKVKLQPIFADLQ RGEHLRLSLAGAAWPAIGVNPGHDRHPCGPPGPHCQVVTMTLQLNGSKLRLLPWNSGKIDFDLPQEF
Sequences:
>Translated_547_residues MCVEGRTSSGSVNWHDAWLTLSDGVKLVARLWVPKGEGPWPALVMRQPYGRALASTVTYIHPGWWASHGYLVVVQDVRGQ GDSEGHFNGFLQEASDTSQTHAWVRELPECNGRLGTYGFSYQGLTQLLAEPGTPPPDCLAPAMAGVDERNHWSCEGGAHW WHLGLAWGLQLAALQARRCGNWEAWRELRRSLEDDSYLYEGPALLKRHDPDGMSLRWLQQASQNDQGWVVHKPLDSWLRQ PMLLLGGWWDPHLNGLLDLYQRSSQVGGSPELHIGPATHLQWWPDAQQLQLEFFDRHLQSSKALTNSRPHGRIWNITSCS WQRFVSPTQTTTSAHAGWSLVSGGMACLDPSEGALHQNKEGGGVVYVVHDPWRPVQAVGGHLSPKPGVAERSAVDQRADV ATFTSTALQEPLQLNGIPLLQLTVQSDQPGFDLCVAFSIVNRSHSEVKQLSTGFLRVQGEQALRMLPRKVKLQPIFADLQ RGEHLRLSLAGAAWPAIGVNPGHDRHPCGPPGPHCQVVTMTLQLNGSKLRLLPWNSGKIDFDLPQEF >Mature_547_residues MCVEGRTSSGSVNWHDAWLTLSDGVKLVARLWVPKGEGPWPALVMRQPYGRALASTVTYIHPGWWASHGYLVVVQDVRGQ GDSEGHFNGFLQEASDTSQTHAWVRELPECNGRLGTYGFSYQGLTQLLAEPGTPPPDCLAPAMAGVDERNHWSCEGGAHW WHLGLAWGLQLAALQARRCGNWEAWRELRRSLEDDSYLYEGPALLKRHDPDGMSLRWLQQASQNDQGWVVHKPLDSWLRQ PMLLLGGWWDPHLNGLLDLYQRSSQVGGSPELHIGPATHLQWWPDAQQLQLEFFDRHLQSSKALTNSRPHGRIWNITSCS WQRFVSPTQTTTSAHAGWSLVSGGMACLDPSEGALHQNKEGGGVVYVVHDPWRPVQAVGGHLSPKPGVAERSAVDQRADV ATFTSTALQEPLQLNGIPLLQLTVQSDQPGFDLCVAFSIVNRSHSEVKQLSTGFLRVQGEQALRMLPRKVKLQPIFADLQ RGEHLRLSLAGAAWPAIGVNPGHDRHPCGPPGPHCQVVTMTLQLNGSKLRLLPWNSGKIDFDLPQEF
Specific function: Hydrolyzes cocaine to benzoate and ecgonine methyl ester, endowing the bacteria with the ability to utilize cocaine as a sole source of carbon and energy for growth, as this bacterium lives in the rhizosphere of coca plants [H]
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta hydrolase family. Carboxylesterase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 60682; Mature: 60682
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVEGRTSSGSVNWHDAWLTLSDGVKLVARLWVPKGEGPWPALVMRQPYGRALASTVTYI CCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHEEE HPGWWASHGYLVVVQDVRGQGDSEGHFNGFLQEASDTSQTHAWVRELPECNGRLGTYGFS CCCEECCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC YQGLTQLLAEPGTPPPDCLAPAMAGVDERNHWSCEGGAHWWHLGLAWGLQLAALQARRCG HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCC NWEAWRELRRSLEDDSYLYEGPALLKRHDPDGMSLRWLQQASQNDQGWVVHKPLDSWLRQ CHHHHHHHHHHCCCCCEEECCCHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHCC PMLLLGGWWDPHLNGLLDLYQRSSQVGGSPELHIGPATHLQWWPDAQQLQLEFFDRHLQS CCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCCHHHHHHHHHHHHHHH SKALTNSRPHGRIWNITSCSWQRFVSPTQTTTSAHAGWSLVSGGMACLDPSEGALHQNKE HHHHCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCC GGGVVYVVHDPWRPVQAVGGHLSPKPGVAERSAVDQRADVATFTSTALQEPLQLNGIPLL CCCEEEEEECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEE QLTVQSDQPGFDLCVAFSIVNRSHSEVKQLSTGFLRVQGEQALRMLPRKVKLQPIFADLQ EEEEECCCCCHHHEEEHHHHCCCHHHHHHHHCCEEEECCHHHHHHCCHHEEECHHHHHHC RGEHLRLSLAGAAWPAIGVNPGHDRHPCGPPGPHCQVVTMTLQLNGSKLRLLPWNSGKID CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCEEE FDLPQEF CCCCCCC >Mature Secondary Structure MCVEGRTSSGSVNWHDAWLTLSDGVKLVARLWVPKGEGPWPALVMRQPYGRALASTVTYI CCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHEEE HPGWWASHGYLVVVQDVRGQGDSEGHFNGFLQEASDTSQTHAWVRELPECNGRLGTYGFS CCCEECCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC YQGLTQLLAEPGTPPPDCLAPAMAGVDERNHWSCEGGAHWWHLGLAWGLQLAALQARRCG HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCC NWEAWRELRRSLEDDSYLYEGPALLKRHDPDGMSLRWLQQASQNDQGWVVHKPLDSWLRQ CHHHHHHHHHHCCCCCEEECCCHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCHHHHHCC PMLLLGGWWDPHLNGLLDLYQRSSQVGGSPELHIGPATHLQWWPDAQQLQLEFFDRHLQS CCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCCHHHHHHHHHHHHHHH SKALTNSRPHGRIWNITSCSWQRFVSPTQTTTSAHAGWSLVSGGMACLDPSEGALHQNKE HHHHCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCC GGGVVYVVHDPWRPVQAVGGHLSPKPGVAERSAVDQRADVATFTSTALQEPLQLNGIPLL CCCEEEEEECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEE QLTVQSDQPGFDLCVAFSIVNRSHSEVKQLSTGFLRVQGEQALRMLPRKVKLQPIFADLQ EEEEECCCCCHHHEEEHHHHCCCHHHHHHHHCCEEEECCHHHHHHCCHHEEECHHHHHHC RGEHLRLSLAGAAWPAIGVNPGHDRHPCGPPGPHCQVVTMTLQLNGSKLRLLPWNSGKID CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCEEE FDLPQEF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10698749; 11742345; 12369817 [H]