| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023524
Identifier: 124023524
GI number: 124023524
Start: 1584588
End: 1584959
Strand: Reverse
Name: 124023524
Synonym: P9303_18241
Alternate gene names: NA
Gene position: 1584959-1584588 (Counterclockwise)
Preceding gene: 124023525
Following gene: 124023523
Centisome position: 59.08
GC content: 52.96
Gene sequence:
>372_bases ATGGTTGACGAGGCCACCGCAACTCACACCACTGTCGATGCAACGGTGCTGGAAAGTTCCGTTATTGATCAGAGTCTGTT TCAAAAGGTGTTGCGTCAGGCTGGGCGAAGCCTTGCAAGGCCGGCTTTAGAAGCTTTGGAAATGCTCCTGGATGCATCAA CACCTGCACAGGCCAGACTCACCATGCTCGCTGCACTGACCTACCTAATCATGCCCATTGATTTGGTGCCAGATTTGATC CCTGTTGCAGGATTTAGTGATGACCTTGTTGCACTTACCGCAGTCGTAGGCCTCTGGAGCAATCACATGACCCCCCAGAT TCGTGACCGTGCCCGACGCAAACTAGATCGGTGGTTTCCAGTTACCGGCTGA
Upstream 100 bases:
>100_bases TCACTGAAAAGTAGGAAATCCTCCCCAAGAAGGGGCGGAGCTCATCTTATGAATCCCCATAAATCAGGTAAAAATGGAAT GACATCGGCGCCGAAGAACC
Downstream 100 bases:
>100_bases TGTCAGGATGGTCTGGTCAAGTTGAAGATGAGCTGACCCTCCTGCTGAAGGATTGGTTGAAGCAGCAGGGACGTACCCAG GCAGACCTGCGTCGAAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MVDEATATHTTVDATVLESSVIDQSLFQKVLRQAGRSLARPALEALEMLLDASTPAQARLTMLAALTYLIMPIDLVPDLI PVAGFSDDLVALTAVVGLWSNHMTPQIRDRARRKLDRWFPVTG
Sequences:
>Translated_123_residues MVDEATATHTTVDATVLESSVIDQSLFQKVLRQAGRSLARPALEALEMLLDASTPAQARLTMLAALTYLIMPIDLVPDLI PVAGFSDDLVALTAVVGLWSNHMTPQIRDRARRKLDRWFPVTG >Mature_123_residues MVDEATATHTTVDATVLESSVIDQSLFQKVLRQAGRSLARPALEALEMLLDASTPAQARLTMLAALTYLIMPIDLVPDLI PVAGFSDDLVALTAVVGLWSNHMTPQIRDRARRKLDRWFPVTG
Specific function: Unknown
COG id: COG3339
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13470; Mature: 13470
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDEATATHTTVDATVLESSVIDQSLFQKVLRQAGRSLARPALEALEMLLDASTPAQARL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TMLAALTYLIMPIDLVPDLIPVAGFSDDLVALTAVVGLWSNHMTPQIRDRARRKLDRWFP HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC VTG CCC >Mature Secondary Structure MVDEATATHTTVDATVLESSVIDQSLFQKVLRQAGRSLARPALEALEMLLDASTPAQARL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TMLAALTYLIMPIDLVPDLIPVAGFSDDLVALTAVVGLWSNHMTPQIRDRARRKLDRWFP HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC VTG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA