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The map label for this gene is 124023519

Identifier: 124023519

GI number: 124023519

Start: 1582275

End: 1582652

Strand: Reverse

Name: 124023519

Synonym: P9303_18191

Alternate gene names: NA

Gene position: 1582652-1582275 (Counterclockwise)

Preceding gene: 124023520

Following gene: 124023517

Centisome position: 59.0

GC content: 47.35

Gene sequence:

>378_bases
ATGAACCTACAGATTCGTCTGAGGCGACTTGTATTTGAACTTGGGGGCCAAACTGCAGGATTATTAATCCTGATCTCTAC
ACTCTTGATCCATCCTATTGGCACCATTGCATTGGATATCGATTCTGGAGGATCGTTATTCAAGCAACACTGTTCAGGGT
GTCATGTAAATGGTGGCAATATCATTCGACGTAACAAAACCCTTAGGCTCAAAGCACTAGAGCGCAATGGTCTAGATAAT
CCTCAAGCAATCGCCAGAGTGGCTCGAGAAGGAATCGGGCAAATGTCTGGCTACGAGGATGTTCTTGGCGATAGTGGAGA
TCAGCTCGTGGCGGCCTGGATATGGGCTCAAGCTCAGAATGCTTGGACCCAAGGGTAA

Upstream 100 bases:

>100_bases
CTTTCACGAGGATGCCAAGCCCATGCGCAACTGTTAAAGCGGTATCAGCAGATCACAACAGATCACTACGGCAGACTGAG
GCGTTACTGCTGATGATTGC

Downstream 100 bases:

>100_bases
ACCTCAAGAGAGGTCCATATTCCTTCCTTCCAGTAAACGTCTTGCTCTAGAAGCTTCCTAACAACATCAAGACTTGCGGC
TTCGAAAATCCCAAAAACAT

Product: cytochrome C, class IC:cytochrome C, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MNLQIRLRRLVFELGGQTAGLLILISTLLIHPIGTIALDIDSGGSLFKQHCSGCHVNGGNIIRRNKTLRLKALERNGLDN
PQAIARVAREGIGQMSGYEDVLGDSGDQLVAAWIWAQAQNAWTQG

Sequences:

>Translated_125_residues
MNLQIRLRRLVFELGGQTAGLLILISTLLIHPIGTIALDIDSGGSLFKQHCSGCHVNGGNIIRRNKTLRLKALERNGLDN
PQAIARVAREGIGQMSGYEDVLGDSGDQLVAAWIWAQAQNAWTQG
>Mature_125_residues
MNLQIRLRRLVFELGGQTAGLLILISTLLIHPIGTIALDIDSGGSLFKQHCSGCHVNGGNIIRRNKTLRLKALERNGLDN
PQAIARVAREGIGQMSGYEDVLGDSGDQLVAAWIWAQAQNAWTQG

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cellular thylakoid lumen (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family. PetJ subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13558; Mature: 13558

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQIRLRRLVFELGGQTAGLLILISTLLIHPIGTIALDIDSGGSLFKQHCSGCHVNGGN
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCCCCC
IIRRNKTLRLKALERNGLDNPQAIARVAREGIGQMSGYEDVLGDSGDQLVAAWIWAQAQN
EEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHCC
AWTQG
CCCCC
>Mature Secondary Structure
MNLQIRLRRLVFELGGQTAGLLILISTLLIHPIGTIALDIDSGGSLFKQHCSGCHVNGGN
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCCCCC
IIRRNKTLRLKALERNGLDNPQAIARVAREGIGQMSGYEDVLGDSGDQLVAAWIWAQAQN
EEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHCC
AWTQG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]