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The map label for this gene is ndhL

Identifier: 124023514

GI number: 124023514

Start: 1579991

End: 1580197

Strand: Direct

Name: ndhL

Synonym: P9303_18141

Alternate gene names: 124023514

Gene position: 1579991-1580197 (Clockwise)

Preceding gene: 124023513

Following gene: 124023515

Centisome position: 58.9

GC content: 47.34

Gene sequence:

>207_bases
ATGGTGCTCGCTGCCTATGTCTTGTTAGGCGGCCTCTATTTGATTGTTGTCCCTTTGCTCCTCTATTCCTGGATGAACAG
ACGGTGGCACTGTATGGGCAAATTCGAGCGTCTAAGCGCCTACGGAATGGTGTTCCTATTCTTTCCCGGTTTAATTCTAT
TCGCGCCTTTTTTGAATCTTCGCCTTAATGGTCAAGGAGAGGTTTGA

Upstream 100 bases:

>100_bases
GCTGGGCCAAGGCCCGCAATGGCATCCTAGATTTACACGAAGCAGTTTGCGGACAGTGTTTCTACAGGCCGTCACCAGTC
CAATCTCGATCAACTCGCTG

Downstream 100 bases:

>100_bases
ACATATGACGCGTGCCAAGGTCATTCAGCTGGGCTTTCTTGTTTTGATACTCGGGGGCATCGCTTACAGTGTATTGAGAT
TTGCTGGCCTGGATAGTATT

Product: NADH dehydrogenase subunit NdhL (ndhL)

Products: NA

Alternate protein names: NAD(P)H dehydrogenase I subunit L; NDH-1 subunit L; NDH-L

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MVLAAYVLLGGLYLIVVPLLLYSWMNRRWHCMGKFERLSAYGMVFLFFPGLILFAPFLNLRLNGQGEV

Sequences:

>Translated_68_residues
MVLAAYVLLGGLYLIVVPLLLYSWMNRRWHCMGKFERLSAYGMVFLFFPGLILFAPFLNLRLNGQGEV
>Mature_68_residues
MVLAAYVLLGGLYLIVVPLLLYSWMNRRWHCMGKFERLSAYGMVFLFFPGLILFAPFLNLRLNGQGEV

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhL subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDHL_PROM3 (A2CAP6)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001017821.1
- STRING:   A2CAP6
- GeneID:   4775936
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_18141
- eggNOG:   NOG08765
- HOGENOM:   HBG711505
- ProtClustDB:   CLSK893123
- GO:   GO:0006810
- HAMAP:   MF_01355
- InterPro:   IPR019654

Pfam domain/function: PF10716 NdhL

EC number: NA

Molecular weight: Translated: 7841; Mature: 7841

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x16b45f88)-; HASH(0x16505a7c)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLAAYVLLGGLYLIVVPLLLYSWMNRRWHCMGKFERLSAYGMVFLFFPGLILFAPFLNL
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RLNGQGEV
EECCCCCH
>Mature Secondary Structure
MVLAAYVLLGGLYLIVVPLLLYSWMNRRWHCMGKFERLSAYGMVFLFFPGLILFAPFLNL
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RLNGQGEV
EECCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA