The gene/protein map for NC_008820 is currently unavailable.
Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124023494

Identifier: 124023494

GI number: 124023494

Start: 1563868

End: 1565082

Strand: Direct

Name: 124023494

Synonym: P9303_17941

Alternate gene names: NA

Gene position: 1563868-1565082 (Clockwise)

Preceding gene: 124023493

Following gene: 124023495

Centisome position: 58.3

GC content: 40.49

Gene sequence:

>1215_bases
GTGGCGCTAGAGACTCCTGAAGCCATGGCAAATGAGTCGTCCAATCATTCCGTATCTGAGCAAACTGCAAATGACTACTT
CAAAGAAGGTGAAAAAAGATTTCATTTAAAAGATTATCAAGGGGCAATTGATTGTTACAGCAAAGCAATTGAGATCAATC
CAAATAATGCCATTGCATACAATAATCGAGGGAATGTAAAAGATGAACTAGGCGATTATCAAAGCGCAATGAATGATTAC
AATAAAGCAATTGACATTAACAGTCTGGATGCCAGCTTTTACATCAATAGAGGTGTCGTCAAGAGACACTCAAATAACAT
CGAAGGGGCAATCGATGATTACACAAAAGCTATTGAACTAGATCCACAACACGCTACTGCTTATTACAATAGGGGGATTG
CTAAAGTCAATCTAAGCGACAACAAAGGGGCTATCTTTGATTATACTAAGGCACTTACCGTAAATCCAAGACATGCTAAA
TCATACTACAATAGAGCGATTAGCAAAAACAATATTAATGATATCAAAGGGGCAATTTCTGATTACACAAAAGCAATTGA
GGCCATGCCGGTGTTTGCCTCTGCCTATTACAATCGCGGCAATTTAATGGAGAGACTGGGCCGAAGGCAAGCAGCGGTTA
CTGACCATGAGAAGGCGCTAGTAATAAAACCACAACTTCTCACTGCGATGAACGAGCGTGGTGAAAATAAAAACTTAGTT
GAGAATAAGATTGTAAATGATTTGAACAATGAAGAAGACAGAAGTCAGCTAGATGCATTTAATTATTATAGCCAAGGCAA
TGCTGAACAAAAGCGAGGCAACAATCAATCAGCGATCGACTGTTACACCAAGGCGATAGAAGTCAATCCACACTATGCCG
AGGCATACAACTACAGGGGCCTAGCTAATTACAACCTTTGTGACTATCAAGCTGCGCTTGATGATTACAACAAGGCAATA
GAAATTAACTCGATATATGAAGATGCCTACATTGGTTGCGGTCTTGCAAAGTCTGCATTAAGTGATTACCAAGGTGCAAT
TGGAGCCTATGAGAGGGTACTAGTCATTAACCCTAAGAATGTTGCTGCCTATAGAAATCGTGGTATTGCCAAAGAATTGG
AGGGAAATCTAGAGGGTGCTTGTTCTGATTGGAGGCAGGCCTCCTCTCTGGGAGATGAAGATGCTGCAGAATGGGTAAAG
GCACAATGTTTTTAA

Upstream 100 bases:

>100_bases
TCGTGCAAGCACAGAGTTGGCTATGGCCAAGCCAGTCCGCGGAATCATTGAGTTAACATACTGCTAAAAGTTTGGTTATG
TCTTGTAGACTCCAACTGAA

Downstream 100 bases:

>100_bases
GGGTCCCGCTTCTGCCATCTGTGGAGTCACAAAAAAGAGGCTGGAAAGAGCACATAAATGCTTCTTTCAATTTAATGCTA
AAACCGTGCTAATAACATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MALETPEAMANESSNHSVSEQTANDYFKEGEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNRGNVKDELGDYQSAMNDY
NKAIDINSLDASFYINRGVVKRHSNNIEGAIDDYTKAIELDPQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAK
SYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEKALVIKPQLLTAMNERGENKNLV
ENKIVNDLNNEEDRSQLDAFNYYSQGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGLANYNLCDYQAALDDYNKAI
EINSIYEDAYIGCGLAKSALSDYQGAIGAYERVLVINPKNVAAYRNRGIAKELEGNLEGACSDWRQASSLGDEDAAEWVK
AQCF

Sequences:

>Translated_404_residues
MALETPEAMANESSNHSVSEQTANDYFKEGEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNRGNVKDELGDYQSAMNDY
NKAIDINSLDASFYINRGVVKRHSNNIEGAIDDYTKAIELDPQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAK
SYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEKALVIKPQLLTAMNERGENKNLV
ENKIVNDLNNEEDRSQLDAFNYYSQGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGLANYNLCDYQAALDDYNKAI
EINSIYEDAYIGCGLAKSALSDYQGAIGAYERVLVINPKNVAAYRNRGIAKELEGNLEGACSDWRQASSLGDEDAAEWVK
AQCF
>Mature_403_residues
ALETPEAMANESSNHSVSEQTANDYFKEGEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNRGNVKDELGDYQSAMNDYN
KAIDINSLDASFYINRGVVKRHSNNIEGAIDDYTKAIELDPQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAKS
YYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEKALVIKPQLLTAMNERGENKNLVE
NKIVNDLNNEEDRSQLDAFNYYSQGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGLANYNLCDYQAALDDYNKAIE
INSIYEDAYIGCGLAKSALSDYQGAIGAYERVLVINPKNVAAYRNRGIAKELEGNLEGACSDWRQASSLGDEDAAEWVKA
QCF

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=355, Percent_Identity=28.7323943661972, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI32307150, Length=355, Percent_Identity=28.7323943661972, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI310123097, Length=186, Percent_Identity=32.7956989247312, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI310131789, Length=186, Percent_Identity=32.7956989247312, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI310110582, Length=186, Percent_Identity=32.7956989247312, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI170784867, Length=258, Percent_Identity=25.5813953488372, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI24308141, Length=130, Percent_Identity=35.3846153846154, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI54607135, Length=258, Percent_Identity=24.4186046511628, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI4506921, Length=112, Percent_Identity=33.9285714285714, Blast_Score=65, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI115532692, Length=299, Percent_Identity=28.7625418060201, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI115532690, Length=299, Percent_Identity=28.7625418060201, Blast_Score=111, Evalue=7e-25,
Organism=Drosophila melanogaster, GI17647755, Length=356, Percent_Identity=28.0898876404494, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24585827, Length=356, Percent_Identity=28.0898876404494, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24585829, Length=356, Percent_Identity=28.0898876404494, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI281364285, Length=292, Percent_Identity=22.6027397260274, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581187, Length=292, Percent_Identity=22.6027397260274, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 45261; Mature: 45130

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALETPEAMANESSNHSVSEQTANDYFKEGEKRFHLKDYQGAIDCYSKAIEINPNNAIAY
CCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHCEEEECCCCEEEE
NNRGNVKDELGDYQSAMNDYNKAIDINSLDASFYINRGVVKRHSNNIEGAIDDYTKAIEL
CCCCCCHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCHHHHCCCCCCCCHHHHHHHEEC
DPQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAKSYYNRAISKNNINDIKGAIS
CCCHHHHHHHCCEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHH
DYTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEKALVIKPQLLTAMNERGENKNLV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCCCHH
ENKIVNDLNNEEDRSQLDAFNYYSQGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRG
HHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHEEECCCCHHHHHCCCC
LANYNLCDYQAALDDYNKAIEINSIYEDAYIGCGLAKSALSDYQGAIGAYERVLVINPKN
CCCCCCHHHHHHHHHHHCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCC
VAAYRNRGIAKELEGNLEGACSDWRQASSLGDEDAAEWVKAQCF
HHHHHCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
ALETPEAMANESSNHSVSEQTANDYFKEGEKRFHLKDYQGAIDCYSKAIEINPNNAIAY
CCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHCEEEECCCCEEEE
NNRGNVKDELGDYQSAMNDYNKAIDINSLDASFYINRGVVKRHSNNIEGAIDDYTKAIEL
CCCCCCHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCHHHHCCCCCCCCHHHHHHHEEC
DPQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAKSYYNRAISKNNINDIKGAIS
CCCHHHHHHHCCEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHH
DYTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEKALVIKPQLLTAMNERGENKNLV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCCCHH
ENKIVNDLNNEEDRSQLDAFNYYSQGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRG
HHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHEEECCCCHHHHHCCCC
LANYNLCDYQAALDDYNKAIEINSIYEDAYIGCGLAKSALSDYQGAIGAYERVLVINPKN
CCCCCCHHHHHHHHHHHCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCC
VAAYRNRGIAKELEGNLEGACSDWRQASSLGDEDAAEWVKAQCF
HHHHHCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]