| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023482
Identifier: 124023482
GI number: 124023482
Start: 1557721
End: 1558038
Strand: Reverse
Name: 124023482
Synonym: P9303_17821
Alternate gene names: NA
Gene position: 1558038-1557721 (Counterclockwise)
Preceding gene: 124023483
Following gene: 124023478
Centisome position: 58.08
GC content: 52.83
Gene sequence:
>318_bases ATGGATGCTTTACCCAGCCACCATCAACGCTCTAGGCAGTGGACTTTCAGTCGTTCACTTCTAGTTGACCCACTACGATC TCGGCTGCGTCAGTGGCAGCAGGTACGAACTTGGGCGCGTTTGATCCGTGAGGCTGAGGCCCTTTGGCATGTGGATGTGA GGGAACTCAGACGTTTGGGTGCCTTGGAGTTGTCCCAGTTGCTTGAGGAGGTTCCACCTTGCCAGCGGGGAAGGGTTAAT CGTTGGTTACATCGCTATTCAGTTGCAACCAGGTTCCAATCAACTGATTTGGAGACCAATTGCTCTGAACGGTCATGA
Upstream 100 bases:
>100_bases AGGCTGTCTTGTTGGAATGGAAAGAGCTGATTTGCTTCAGAACTCCGAAGCGCTCTGGTGATTTTGCATGGATCGGCCTT GAATTCGTCAAGGTGGTCAT
Downstream 100 bases:
>100_bases ATTGTTGATGTCTAACTAGATGATTTTTTCTGGAAACCGATTTTTTTATTGTGCAATACCAGTTGATTAAACGTTTGACG GTAGATTTGAGCTTAGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MDALPSHHQRSRQWTFSRSLLVDPLRSRLRQWQQVRTWARLIREAEALWHVDVRELRRLGALELSQLLEEVPPCQRGRVN RWLHRYSVATRFQSTDLETNCSERS
Sequences:
>Translated_105_residues MDALPSHHQRSRQWTFSRSLLVDPLRSRLRQWQQVRTWARLIREAEALWHVDVRELRRLGALELSQLLEEVPPCQRGRVN RWLHRYSVATRFQSTDLETNCSERS >Mature_105_residues MDALPSHHQRSRQWTFSRSLLVDPLRSRLRQWQQVRTWARLIREAEALWHVDVRELRRLGALELSQLLEEVPPCQRGRVN RWLHRYSVATRFQSTDLETNCSERS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12661; Mature: 12661
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALPSHHQRSRQWTFSRSLLVDPLRSRLRQWQQVRTWARLIREAEALWHVDVRELRRLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALELSQLLEEVPPCQRGRVNRWLHRYSVATRFQSTDLETNCSERS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDALPSHHQRSRQWTFSRSLLVDPLRSRLRQWQQVRTWARLIREAEALWHVDVRELRRLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALELSQLLEEVPPCQRGRVNRWLHRYSVATRFQSTDLETNCSERS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA