| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023447
Identifier: 124023447
GI number: 124023447
Start: 1527832
End: 1528857
Strand: Direct
Name: 124023447
Synonym: P9303_17471
Alternate gene names: NA
Gene position: 1527832-1528857 (Clockwise)
Preceding gene: 124023441
Following gene: 124023449
Centisome position: 56.95
GC content: 53.12
Gene sequence:
>1026_bases ATGATTGGCAAAGAACGCTGCCTTAGACCTCCATCCTGCAGGGCGAAGGGCCTTCAGTTGCTGATCGAACGCGCTTCAAT ATGCGCGTTTGATGATTCAGCTGTTTTGAAGATTCTGATCATGGGGGGGACCCGATTTGTCGGCAAGCCTCTGGTTACTC GACTTCAGGCCCAAGGCCATGCGCTCACGTTGTTCACTCGTGGCCGCCATTCTTTGCCAGATGGTGTGGAACATCTCAGT GGTGATCGAACCACCACTGAGGGGCTGAGTCGTCTTCAAGGCCGAAGCTTCGATGTCATCGTCGACAGCTCAGGGCGCAA GCTTGAAGACAGTCAAAGGGTGGTGGCCTGTACAGGAGAGCCAAAGCATCGTTTCCTCTATGTCAGTTCCGCTGGCGTCT ATGCGGATTCCGAACACTGGCCACTGAATGAGGAGAGTGCCACCGACCCGAACAGTCGTCATGCCGGCAAGGCTCAGACC GAATCATGGCTGCTTCAGCAAGGAATTCCCTTTACCAGTTTCCGACCTACTTATATCTATGGTCCTGGTAATTACAACCC GATTGAACGTTGGTTTTTCGATCGTATCGTCCATAACCGACCGGTTCCGTTGCCACGAGATGGCACCACCATCACCCAAT TGGGGCATGTTGTTGATCTGGCTGATGCCATGGTTCGTTCCCTTGAGGTGGAGACAGCGACGAATCGCATTTACAACTGT TCCAGCAAGCGTGGTATCACCTTCAGGGGCTTGATTGCAGCGGCAGCAAGGGCTTGTGGCAAAGATCCAAATACCGTTGA GCTTCGTTCTTTTGATCCTTCAGGCCTGAATCCCAAAGCTCGTAAGGCCTTCCCGCTGAGGCTGAGTCATTTCCTTACCG ATATCACCAGGGTGGAGCGGGAATTGGCCTGGCAACCACGCTTTGACCTTGAGACTGGCCTCGAAGATAGCTACTGCAAC GACTACTCCTTGAAGCCAACGGCTGAACCAGATTTCAGTGCCGATCAATCCTTGATCGGGGTTTGA
Upstream 100 bases:
>100_bases AGCAACGGGGTCCTCGCTGAAGCGAGTCACCTTCGCGTAGTCGCCCTGGTGAAGTCGCACGCAAGCGCTGTCCAGTAGGT CGATGGCTGGGATGATCTCC
Downstream 100 bases:
>100_bases TGTATGCCACCGCAGAGCTAAGCGCCAGGAACAGAGATGGCCAGAACAACCACCAGCCCAGGTGCTGCATATTTAGGCAA AAGTTGTGGCTTCCCCAACT
Product: mRNA binding protein
Products: NA
Alternate protein names: Reductase; Nucleotide Sugar Epimerase; Isoflavone Reductase; Nucleoside-Diphosphate-Sugar Epimerase; DTDP-Glucose 4 6-Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; UDP-Glucose 4-Epimerase; NADH-Ubiquinone Oxidoreductase; Dtdpglucose 4 6-Dehydratase-Like Protein; NAD-Dependent Protein; NAD Dependent Epimerase/Dehydratase Family
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MIGKERCLRPPSCRAKGLQLLIERASICAFDDSAVLKILIMGGTRFVGKPLVTRLQAQGHALTLFTRGRHSLPDGVEHLS GDRTTTEGLSRLQGRSFDVIVDSSGRKLEDSQRVVACTGEPKHRFLYVSSAGVYADSEHWPLNEESATDPNSRHAGKAQT ESWLLQQGIPFTSFRPTYIYGPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEVETATNRIYNC SSKRGITFRGLIAAAARACGKDPNTVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVERELAWQPRFDLETGLEDSYCN DYSLKPTAEPDFSADQSLIGV
Sequences:
>Translated_341_residues MIGKERCLRPPSCRAKGLQLLIERASICAFDDSAVLKILIMGGTRFVGKPLVTRLQAQGHALTLFTRGRHSLPDGVEHLS GDRTTTEGLSRLQGRSFDVIVDSSGRKLEDSQRVVACTGEPKHRFLYVSSAGVYADSEHWPLNEESATDPNSRHAGKAQT ESWLLQQGIPFTSFRPTYIYGPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEVETATNRIYNC SSKRGITFRGLIAAAARACGKDPNTVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVERELAWQPRFDLETGLEDSYCN DYSLKPTAEPDFSADQSLIGV >Mature_341_residues MIGKERCLRPPSCRAKGLQLLIERASICAFDDSAVLKILIMGGTRFVGKPLVTRLQAQGHALTLFTRGRHSLPDGVEHLS GDRTTTEGLSRLQGRSFDVIVDSSGRKLEDSQRVVACTGEPKHRFLYVSSAGVYADSEHWPLNEESATDPNSRHAGKAQT ESWLLQQGIPFTSFRPTYIYGPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEVETATNRIYNC SSKRGITFRGLIAAAARACGKDPNTVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVERELAWQPRFDLETGLEDSYCN DYSLKPTAEPDFSADQSLIGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37944; Mature: 37944
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKERCLRPPSCRAKGLQLLIERASICAFDDSAVLKILIMGGTRFVGKPLVTRLQAQGH CCCCHHCCCCCCHHHHHHHHHHHHHHHEECCCHHEEEEEEECCCHHHCCHHHHHHHCCCC ALTLFTRGRHSLPDGVEHLSGDRTTTEGLSRLQGRSFDVIVDSSGRKLEDSQRVVACTGE EEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCC PKHRFLYVSSAGVYADSEHWPLNEESATDPNSRHAGKAQTESWLLQQGIPFTSFRPTYIY CCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEE GPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEVETATNRIYNC CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC SSKRGITFRGLIAAAARACGKDPNTVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVER CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHH ELAWQPRFDLETGLEDSYCNDYSLKPTAEPDFSADQSLIGV HHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MIGKERCLRPPSCRAKGLQLLIERASICAFDDSAVLKILIMGGTRFVGKPLVTRLQAQGH CCCCHHCCCCCCHHHHHHHHHHHHHHHEECCCHHEEEEEEECCCHHHCCHHHHHHHCCCC ALTLFTRGRHSLPDGVEHLSGDRTTTEGLSRLQGRSFDVIVDSSGRKLEDSQRVVACTGE EEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCC PKHRFLYVSSAGVYADSEHWPLNEESATDPNSRHAGKAQTESWLLQQGIPFTSFRPTYIY CCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEE GPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEVETATNRIYNC CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC SSKRGITFRGLIAAAARACGKDPNTVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVER CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHH ELAWQPRFDLETGLEDSYCNDYSLKPTAEPDFSADQSLIGV HHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA