Click here to switch to the map view.

The map label for this gene is 124023397

Identifier: 124023397

GI number: 124023397

Start: 1482683

End: 1483279

Strand: Direct

Name: 124023397

Synonym: P9303_16951

Alternate gene names: NA

Gene position: 1482683-1483279 (Clockwise)

Preceding gene: 124023393

Following gene: 124023398

Centisome position: 55.27

GC content: 50.25

Gene sequence:

>597_bases
ATGACGCGTGGATTGGCCGGCAATTGCCATAACGTGACTGCTCAAACTACTGGCTCATTGCAATTTTCTAGTTTCATGAA
TCTCTCTCCCTGTTGGTGGAACCGTTGTAGAGCAGTGTTGCTTAGCGGCCTTGTGATTCTTGTGTTGGGTTTAACAGAGT
CACCTGTGATGGCAATCATCCCTCCTGAATTCAGAGGAGGCCAGGCCATTGAAGAGATCTCTAAAGACATGCACGGACGT
GACCTCAAGGAACAAAACTTTCTCAAGGCTGACCTGCGCGGCGTTGATCTCAGTGAGGCCGACCTTCGTGGTGCGGTGTT
TAACAGCAGCCAGCTGCAAGAAGCTGATCTGCAAGGGGCTGATTTGGAAAATGTGGTGGCTTTTGCTAGTCGTTTCGATG
GAGCCGATCTCAGGGGAGCCAACTTCACCAACGCCATGCTGATGCAGAGTCAATTTAAAGATGCCCTTATTGAAGGAGCT
GATTTCAGCAATGCTGTGCTTGATCGTCGCCAGCAGAATGAGCTTTGCTCCAGAGCAAATGGCACCAATGCCGTTAGCGG
CTCCAACACTATTGACAGCCTTGGCTGTCGTTCTTGA

Upstream 100 bases:

>100_bases
TGTGGCATAGAGCGCTGGCGGTGTTGTGGTGTTGCGCAGCAATGTGAGCCAGTGGGCGATCAGTGGATGGGGGGGGACCA
CTACCCTTAGGGTCATTGGC

Downstream 100 bases:

>100_bases
TCCCCAACCCGCATAGGCCTGCCTTGATTTCAAAGCGTCTGCCCGTCACGGTTTTGACTGGTTTCCTTGGAGCTGGAAAG
ACCACCCTGCTACGTCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein; Pentapeptide Repeat Family Protein

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTRGLAGNCHNVTAQTTGSLQFSSFMNLSPCWWNRCRAVLLSGLVILVLGLTESPVMAIIPPEFRGGQAIEEISKDMHGR
DLKEQNFLKADLRGVDLSEADLRGAVFNSSQLQEADLQGADLENVVAFASRFDGADLRGANFTNAMLMQSQFKDALIEGA
DFSNAVLDRRQQNELCSRANGTNAVSGSNTIDSLGCRS

Sequences:

>Translated_198_residues
MTRGLAGNCHNVTAQTTGSLQFSSFMNLSPCWWNRCRAVLLSGLVILVLGLTESPVMAIIPPEFRGGQAIEEISKDMHGR
DLKEQNFLKADLRGVDLSEADLRGAVFNSSQLQEADLQGADLENVVAFASRFDGADLRGANFTNAMLMQSQFKDALIEGA
DFSNAVLDRRQQNELCSRANGTNAVSGSNTIDSLGCRS
>Mature_197_residues
TRGLAGNCHNVTAQTTGSLQFSSFMNLSPCWWNRCRAVLLSGLVILVLGLTESPVMAIIPPEFRGGQAIEEISKDMHGRD
LKEQNFLKADLRGVDLSEADLRGAVFNSSQLQEADLQGADLENVVAFASRFDGADLRGANFTNAMLMQSQFKDALIEGAD
FSNAVLDRRQQNELCSRANGTNAVSGSNTIDSLGCRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21418; Mature: 21287

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGLAGNCHNVTAQTTGSLQFSSFMNLSPCWWNRCRAVLLSGLVILVLGLTESPVMAII
CCCCCCCCCCCCEECCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
PPEFRGGQAIEEISKDMHGRDLKEQNFLKADLRGVDLSEADLRGAVFNSSQLQEADLQGA
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCCCCC
DLENVVAFASRFDGADLRGANFTNAMLMQSQFKDALIEGADFSNAVLDRRQQNELCSRAN
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
GTNAVSGSNTIDSLGCRS
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRGLAGNCHNVTAQTTGSLQFSSFMNLSPCWWNRCRAVLLSGLVILVLGLTESPVMAII
CCCCCCCCCCCEECCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
PPEFRGGQAIEEISKDMHGRDLKEQNFLKADLRGVDLSEADLRGAVFNSSQLQEADLQGA
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCCCCC
DLENVVAFASRFDGADLRGANFTNAMLMQSQFKDALIEGADFSNAVLDRRQQNELCSRAN
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
GTNAVSGSNTIDSLGCRS
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA