| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023392
Identifier: 124023392
GI number: 124023392
Start: 1478797
End: 1479366
Strand: Direct
Name: 124023392
Synonym: P9303_16901
Alternate gene names: NA
Gene position: 1478797-1479366 (Clockwise)
Preceding gene: 124023390
Following gene: 124023393
Centisome position: 55.12
GC content: 51.23
Gene sequence:
>570_bases ATGGATCTAATGCCCGAAGCCTCCGTTCAGGTTCAACTGAACGACTTCAACTCCTGGTCTAGCTTGAACGACACAATTAT GGGCGGATCTAGCCAGGCTGCCTGTCGAGTGACCTCCGAGGGCCTGATCCTAGAAGGAGAACTTGTTGAACAGGATGGAG GCTTTGTCAGTTGCCGTTCACCCCTTTTGAACCCTCCTCTTGATCTTTCCAGCTATCGAGCCTTACAGGTGGAGGTGAAT GGAGACGGTCGCACCCTAAAGCTTGCACTCGGCTCTCGTAGTGGGCTCTTTGGCCTCACTGAGCGTTTTTATGGTGGTTT GCGATGGGTCGCTCAGTTGCCGACCAAGGCTTCTGGTACGACATCCATGGAAATCCCATTTAGCACACTGAAACCTACGG TGCTTGCCCAGCCTTTGGCTATGCCTCTGCGCTTGATTCGCTTTGATGCATCAAGTATCAACCAAGTGCAATTGTTGCAT TCTAAGTTCGGTCAACCAGGAGAACTGAACCCAGAATTCCGCCCTGGCCCAATTCGAGTTTTACTGCGCTCTATCAAAGC AATTCACTGA
Upstream 100 bases:
>100_bases TCTCAATAATATAATTCTCTCAAGGATCAATATCTAACCTTAAAGAAATGAATGATGAACCAAGAGAGAAACTATAAGGT AAATAGATTGTTGGCAAATC
Downstream 100 bases:
>100_bases TTCATTACAAATTTTCCAATATCCAAAATGGCCATATGCATTCAGAGGGGTTGGTATTTTTTTGCCTAATCAAATGCAGC CCCCTAATCAAATGTATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MDLMPEASVQVQLNDFNSWSSLNDTIMGGSSQAACRVTSEGLILEGELVEQDGGFVSCRSPLLNPPLDLSSYRALQVEVN GDGRTLKLALGSRSGLFGLTERFYGGLRWVAQLPTKASGTTSMEIPFSTLKPTVLAQPLAMPLRLIRFDASSINQVQLLH SKFGQPGELNPEFRPGPIRVLLRSIKAIH
Sequences:
>Translated_189_residues MDLMPEASVQVQLNDFNSWSSLNDTIMGGSSQAACRVTSEGLILEGELVEQDGGFVSCRSPLLNPPLDLSSYRALQVEVN GDGRTLKLALGSRSGLFGLTERFYGGLRWVAQLPTKASGTTSMEIPFSTLKPTVLAQPLAMPLRLIRFDASSINQVQLLH SKFGQPGELNPEFRPGPIRVLLRSIKAIH >Mature_189_residues MDLMPEASVQVQLNDFNSWSSLNDTIMGGSSQAACRVTSEGLILEGELVEQDGGFVSCRSPLLNPPLDLSSYRALQVEVN GDGRTLKLALGSRSGLFGLTERFYGGLRWVAQLPTKASGTTSMEIPFSTLKPTVLAQPLAMPLRLIRFDASSINQVQLLH SKFGQPGELNPEFRPGPIRVLLRSIKAIH
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20553; Mature: 20553
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLMPEASVQVQLNDFNSWSSLNDTIMGGSSQAACRVTSEGLILEGELVEQDGGFVSCRS CCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCEEEEECCCEEEECEEEECCCCEEEECC PLLNPPLDLSSYRALQVEVNGDGRTLKLALGSRSGLFGLTERFYGGLRWVAQLPTKASGT CCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC TSMEIPFSTLKPTVLAQPLAMPLRLIRFDASSINQVQLLHSKFGQPGELNPEFRPGPIRV EEEECCHHHCCCHHHHCHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH LLRSIKAIH HHHHHHHCC >Mature Secondary Structure MDLMPEASVQVQLNDFNSWSSLNDTIMGGSSQAACRVTSEGLILEGELVEQDGGFVSCRS CCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCEEEEECCCEEEECEEEECCCCEEEECC PLLNPPLDLSSYRALQVEVNGDGRTLKLALGSRSGLFGLTERFYGGLRWVAQLPTKASGT CCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC TSMEIPFSTLKPTVLAQPLAMPLRLIRFDASSINQVQLLHSKFGQPGELNPEFRPGPIRV EEEECCHHHCCCHHHHCHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH LLRSIKAIH HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA