| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is pgl [H]
Identifier: 124023390
GI number: 124023390
Start: 1477199
End: 1477909
Strand: Direct
Name: pgl [H]
Synonym: P9303_16881
Alternate gene names: 124023390
Gene position: 1477199-1477909 (Clockwise)
Preceding gene: 124023389
Following gene: 124023392
Centisome position: 55.06
GC content: 55.13
Gene sequence:
>711_bases ATGACGACCTACAAAGTTGAGCGAGGGAGCGACCCTGAGGATCTTGCACGTCGTGCCGCCCAGAGAATCGCATCTCATAT TGATCTGGTACTTGATCAGCGTGATCGCGTTCAGATTGCTCTCTCGGGAGGGACCACACCCGCTATTGCCTATAGGTTGC TTGGTCAGGAGCGACTGCCCTGGGATCGTGTTGATGTTTTCCTGGGCGATGAGCGCTGGGTTGATGCCAGTGATGACGCC AGTAACGCCCGCATGCTTCGTACGACACTTCTTGCTGAAGGCCCAGGATCGCAGGCTGCATTTCATCCCGTGCCAACGGT GGAGCTGCCAGACCCTGAGGCCAGTGCCGAGGCCTACGCGAAGATCATTCAGGAAAGCTGTGCAGGTGATCCACCGGTAT TTGATCTAATGGTTTTAGGACTTGGTGAAGATGGCCATACAGCCTCTCTTTTTCCAGGAACGGAAGCCCCCTCCGTTGTT GATCGCTGGGCTACTGTCGGCAGAGGGAAGGGTCTAGAGAGAATCACTCTCACAGCTCCTGTGCTCAGCTCAGCACGCGA AGTGATCTTTCTTGTAAGTGGTGTAGGGAAGCAACTTGCCCTGAAGAGGCTATTGGATTCTGCTGAATCAGCTGAACGCA CGCCTGCCCGCTTGGTTCAACCTCGTTCACCGATTTTGGTCTTGGCAGATGAGGCCGCCTTACTCGGCTGA
Upstream 100 bases:
>100_bases TTGGTGCAGGCCATGCGCGATTGCTTCGGCTCACATACCTACCAACGGGTTGACAAAGAAGGAACCTTCCATACTGAGTG GCTGGACTGAGGAGATCGTG
Downstream 100 bases:
>100_bases TGAAGGCCTCTTGACAAGTATTCTTGTTCATTATTACTTGCATTATCTTCCAGTATCTGCAAATATAAATTCATCAAAAA TTGCAGATCAATTATTGTAT
Product: 6-phosphogluconolactonase (DevB, Pgl)
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTTYKVERGSDPEDLARRAAQRIASHIDLVLDQRDRVQIALSGGTTPAIAYRLLGQERLPWDRVDVFLGDERWVDASDDA SNARMLRTTLLAEGPGSQAAFHPVPTVELPDPEASAEAYAKIIQESCAGDPPVFDLMVLGLGEDGHTASLFPGTEAPSVV DRWATVGRGKGLERITLTAPVLSSAREVIFLVSGVGKQLALKRLLDSAESAERTPARLVQPRSPILVLADEAALLG
Sequences:
>Translated_236_residues MTTYKVERGSDPEDLARRAAQRIASHIDLVLDQRDRVQIALSGGTTPAIAYRLLGQERLPWDRVDVFLGDERWVDASDDA SNARMLRTTLLAEGPGSQAAFHPVPTVELPDPEASAEAYAKIIQESCAGDPPVFDLMVLGLGEDGHTASLFPGTEAPSVV DRWATVGRGKGLERITLTAPVLSSAREVIFLVSGVGKQLALKRLLDSAESAERTPARLVQPRSPILVLADEAALLG >Mature_235_residues TTYKVERGSDPEDLARRAAQRIASHIDLVLDQRDRVQIALSGGTTPAIAYRLLGQERLPWDRVDVFLGDERWVDASDDAS NARMLRTTLLAEGPGSQAAFHPVPTVELPDPEASAEAYAKIIQESCAGDPPVFDLMVLGLGEDGHTASLFPGTEAPSVVD RWATVGRGKGLERITLTAPVLSSAREVIFLVSGVGKQLALKRLLDSAESAERTPARLVQPRSPILVLADEAALLG
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=231, Percent_Identity=37.6623376623377, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI52145310, Length=239, Percent_Identity=30.9623430962343, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115533058, Length=243, Percent_Identity=30.4526748971193, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI115533060, Length=243, Percent_Identity=30.4526748971193, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6321687, Length=217, Percent_Identity=30.8755760368664, Blast_Score=86, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6324362, Length=198, Percent_Identity=29.7979797979798, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6321957, Length=209, Percent_Identity=28.7081339712919, Blast_Score=79, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6319918, Length=188, Percent_Identity=29.7872340425532, Blast_Score=76, Evalue=4e-15, Organism=Drosophila melanogaster, GI24641119, Length=231, Percent_Identity=29.4372294372294, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 25356; Mature: 25225
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYKVERGSDPEDLARRAAQRIASHIDLVLDQRDRVQIALSGGTTPAIAYRLLGQERLP CCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCC WDRVDVFLGDERWVDASDDASNARMLRTTLLAEGPGSQAAFHPVPTVELPDPEASAEAYA CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH KIIQESCAGDPPVFDLMVLGLGEDGHTASLFPGTEAPSVVDRWATVGRGKGLERITLTAP HHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEHH VLSSAREVIFLVSGVGKQLALKRLLDSAESAERTPARLVQPRSPILVLADEAALLG HHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCHHHCC >Mature Secondary Structure TTYKVERGSDPEDLARRAAQRIASHIDLVLDQRDRVQIALSGGTTPAIAYRLLGQERLP CCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCC WDRVDVFLGDERWVDASDDASNARMLRTTLLAEGPGSQAAFHPVPTVELPDPEASAEAYA CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH KIIQESCAGDPPVFDLMVLGLGEDGHTASLFPGTEAPSVVDRWATVGRGKGLERITLTAP HHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEHH VLSSAREVIFLVSGVGKQLALKRLLDSAESAERTPARLVQPRSPILVLADEAALLG HHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231; 9298645 [H]