Click here to switch to the map view.

The map label for this gene is chlP [H]

Identifier: 124023375

GI number: 124023375

Start: 1462830

End: 1464236

Strand: Reverse

Name: chlP [H]

Synonym: P9303_16731

Alternate gene names: 124023375

Gene position: 1464236-1462830 (Counterclockwise)

Preceding gene: 124023376

Following gene: 124023373

Centisome position: 54.58

GC content: 49.4

Gene sequence:

>1407_bases
ATGCTGCGTGTTGCCGTTGTCGGTGGTGGTCCAAGTGGATCCTGCGCCGCAGAAGTTCTTGCCAAAGCAGGTATCCAGAC
CTGGCTATTCGAACGCAAACTCGATAACGCCAAGCCTTGTGGTGGAGCGATTCCTCTTTGCATGGTGGATGAATTCGACC
TGCCCGAGTCGATCATCGACCGCAAGGTTCGCAACATGAGAATGATCTCTCCATCAAACCGTGAGGTAGATATCACTCTG
GACAAGGTTTACAGCCCAGACGACAAGAGTGAATACATCGGTATGTGCCGTAGAGAGGTCATGGATGCCTTTATGCGAGA
TCGCGCCGCCAGCCTCGGAACTAACTTGATTAATGGACTCGTTACCAAAATCGACACTGGCTCTAATCGTCAAGGTCCAT
ACACAATCACCTATTCCGACTATTCAACTGGTAAATCCACTGGTGAAGCCAAAAGCCTCGAGGTTGACCTCATTATTGGT
GCTGATGGAGCCAACAGCCGTGTAGCAACAGCCATGGATGCCGGTGACTACAACGTCGCCATTGCATTCCAAGAGCGCAT
CAAGCTGCCAAATGAAGAAATGGCTTACTACGAAGACCTTGCTGAAATGTATGTAGGCACTGATGTGTCACCAGATTTCT
ACGGCTGGGTGTTCCCCAAGTACGACCACGTTGCCGTTGGCACAGGCACCATGCAAAAAAATCAGACCCTAATAAAAAGC
TTGCAAAAAGGAGTACGCGAACGAGCTAAGAAACGACTTGTGCATGGAGAGGTGATCAAAGTTGAAGCCCACCCGATTCC
TGAGCATCCTCGTCCACGCAGGGTTGTTGGCCGTATGGCCCTTGTTGGAGATGCAGCGGGCTACGTCACCAAAAGCTCTG
GCGAAGGCATCTACTTTGCTGCCAAAAGTGGCCGCATGTGTGCTGAGCAGATCGTGGAATCGAGTCGTTCTGGTGAATTA
ATCCCCTCCGAAGCCGATCTCAAGAAATATCTGAAAAAGTGGGACCGTAAATACGGTGCCACTTACATCGTTCTGTCAAT
ACTCCAAGCCATCTTCTACTCGAATGACACTGCCAGAGAAGCCTTTGTCGCTATGTGCGATGACATGGACGTGCAACGCC
TCACCTTCGATAGTTACCTCTACAAAAAAGTTGTTGCGATGAATCCATGGCAACAGATCAAACTCACACTGCTAACTGTG
GATGCACTCGCACGGGGAATTTTCCGTAATCAAACAAGCTATAAACCTGTTCCCAGTGCTGTGCGTAGCGACGAAGAAGT
GAATGCCATGCTGGCGATCAAAACCATCACCGGCGGTATCAAAGTTGACAACAACAAAGATGCCTCCAAGCAAAACTTGG
CATCAGAACAAGGAGAACGTGACCCTGCTGTTTCAAAAAAATCCTAA

Upstream 100 bases:

>100_bases
GCAGTGTTATCTAGATCGTAAGGGGGGGCGCCAGGGGGCCCCAAAATCTCTTTCAGGGAAGTAAGTTTTACTTAAGTGAT
TCCGCGGAGCGGATCTGAAC

Downstream 100 bases:

>100_bases
GCCTGAAATAACCACTTAGCCGCTGATTTGGCTGAAATCGGCCAGCACACCAGCTTGGTTGCGCAAAAGGCTAAGCAGAT
TGAGACGGTTTGCGCGTACA

Product: aromatic-ring hydroxylase (flavoprotein monooxygenase)

Products: NA

Alternate protein names: Geranylgeranyl reductase [H]

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MLRVAVVGGGPSGSCAAEVLAKAGIQTWLFERKLDNAKPCGGAIPLCMVDEFDLPESIIDRKVRNMRMISPSNREVDITL
DKVYSPDDKSEYIGMCRREVMDAFMRDRAASLGTNLINGLVTKIDTGSNRQGPYTITYSDYSTGKSTGEAKSLEVDLIIG
ADGANSRVATAMDAGDYNVAIAFQERIKLPNEEMAYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQTLIKS
LQKGVRERAKKRLVHGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAAKSGRMCAEQIVESSRSGEL
IPSEADLKKYLKKWDRKYGATYIVLSILQAIFYSNDTAREAFVAMCDDMDVQRLTFDSYLYKKVVAMNPWQQIKLTLLTV
DALARGIFRNQTSYKPVPSAVRSDEEVNAMLAIKTITGGIKVDNNKDASKQNLASEQGERDPAVSKKS

Sequences:

>Translated_468_residues
MLRVAVVGGGPSGSCAAEVLAKAGIQTWLFERKLDNAKPCGGAIPLCMVDEFDLPESIIDRKVRNMRMISPSNREVDITL
DKVYSPDDKSEYIGMCRREVMDAFMRDRAASLGTNLINGLVTKIDTGSNRQGPYTITYSDYSTGKSTGEAKSLEVDLIIG
ADGANSRVATAMDAGDYNVAIAFQERIKLPNEEMAYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQTLIKS
LQKGVRERAKKRLVHGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAAKSGRMCAEQIVESSRSGEL
IPSEADLKKYLKKWDRKYGATYIVLSILQAIFYSNDTAREAFVAMCDDMDVQRLTFDSYLYKKVVAMNPWQQIKLTLLTV
DALARGIFRNQTSYKPVPSAVRSDEEVNAMLAIKTITGGIKVDNNKDASKQNLASEQGERDPAVSKKS
>Mature_468_residues
MLRVAVVGGGPSGSCAAEVLAKAGIQTWLFERKLDNAKPCGGAIPLCMVDEFDLPESIIDRKVRNMRMISPSNREVDITL
DKVYSPDDKSEYIGMCRREVMDAFMRDRAASLGTNLINGLVTKIDTGSNRQGPYTITYSDYSTGKSTGEAKSLEVDLIIG
ADGANSRVATAMDAGDYNVAIAFQERIKLPNEEMAYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQTLIKS
LQKGVRERAKKRLVHGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFAAKSGRMCAEQIVESSRSGEL
IPSEADLKKYLKKWDRKYGATYIVLSILQAIFYSNDTAREAFVAMCDDMDVQRLTFDSYLYKKVVAMNPWQQIKLTLLTV
DALARGIFRNQTSYKPVPSAVRSDEEVNAMLAIKTITGGIKVDNNKDASKQNLASEQGERDPAVSKKS

Specific function: Catalyzes the stepwise hydrogenation of geranylgeraniol to phytol during chlorophyll A (ChlA) biosynthesis [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010253
- InterPro:   IPR011774
- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR016040
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.3.1.83 [H]

Molecular weight: Translated: 51690; Mature: 51690

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVAVVGGGPSGSCAAEVLAKAGIQTWLFERKLDNAKPCGGAIPLCMVDEFDLPESIID
CEEEEEEECCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHH
RKVRNMRMISPSNREVDITLDKVYSPDDKSEYIGMCRREVMDAFMRDRAASLGTNLINGL
HHHHHEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTKIDTGSNRQGPYTITYSDYSTGKSTGEAKSLEVDLIIGADGANSRVATAMDAGDYNVA
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCEEE
IAFQERIKLPNEEMAYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQTLIKS
EEEHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHHH
LQKGVRERAKKRLVHGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA
HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHEECCCCCEECCCCCEEEEE
AKSGRMCAEQIVESSRSGELIPSEADLKKYLKKWDRKYGATYIVLSILQAIFYSNDTARE
ECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHH
AFVAMCDDMDVQRLTFDSYLYKKVVAMNPWQQIKLTLLTVDALARGIFRNQTSYKPVPSA
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEEEHHHHHHHHHHCCCCCCCCCHH
VRSDEEVNAMLAIKTITGGIKVDNNKDASKQNLASEQGERDPAVSKKS
HCCCCCCCEEEEEEEEECCEEECCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLRVAVVGGGPSGSCAAEVLAKAGIQTWLFERKLDNAKPCGGAIPLCMVDEFDLPESIID
CEEEEEEECCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHH
RKVRNMRMISPSNREVDITLDKVYSPDDKSEYIGMCRREVMDAFMRDRAASLGTNLINGL
HHHHHEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTKIDTGSNRQGPYTITYSDYSTGKSTGEAKSLEVDLIIGADGANSRVATAMDAGDYNVA
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCEEE
IAFQERIKLPNEEMAYYEDLAEMYVGTDVSPDFYGWVFPKYDHVAVGTGTMQKNQTLIKS
EEEHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHHH
LQKGVRERAKKRLVHGEVIKVEAHPIPEHPRPRRVVGRMALVGDAAGYVTKSSGEGIYFA
HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHEECCCCCEECCCCCEEEEE
AKSGRMCAEQIVESSRSGELIPSEADLKKYLKKWDRKYGATYIVLSILQAIFYSNDTARE
ECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHH
AFVAMCDDMDVQRLTFDSYLYKKVVAMNPWQQIKLTLLTVDALARGIFRNQTSYKPVPSA
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEEEHHHHHHHHHHCCCCCCCCCHH
VRSDEEVNAMLAIKTITGGIKVDNNKDASKQNLASEQGERDPAVSKKS
HCCCCCCCEEEEEEEEECCEEECCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8766814; 8905231 [H]