| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is recG [H]
Identifier: 124023369
GI number: 124023369
Start: 1455177
End: 1457717
Strand: Direct
Name: recG [H]
Synonym: P9303_16671
Alternate gene names: 124023369
Gene position: 1455177-1457717 (Clockwise)
Preceding gene: 124023368
Following gene: 124023370
Centisome position: 54.24
GC content: 54.19
Gene sequence:
>2541_bases GTGGTGGCAGAGCCCTTCCGCCAATCCTCCAACCAGTCCACCCAAGGCCTGAGTACGGATCAGTTGCAGCATCTACTCAG CTGGATGCGCATTCTGCAGCAAGCGTTAACCCTGGAGGCTGAGAACGGTTTTAAGAATCTTGAGGGGCGTCAGGAGAATT TTCATGCATTCTTGGTGCGTCAGTTAGCAGAACCACCCTCTGGATTGCTGCCTACTAAAAGTCAGGCTCGACTCAGCCAG CTAGCTGAAGCCTTTGCGAGTTATCCAGACAGCTCTGAATCGGCGCGACGTCGATTGGTGACGGACTCAAGACAGCTTCT GCATGGCATTCGCCAGGGATTAGAACCACCAGCGCCAATAGGCCCTCCCAGACTCAAGCAAGGGGAAGCTGAAAGGCAGC GGCAGATGCCTTTACCTAGTGGGAACCGCTCTCTGAAGTTGGAAAGCCCACTGTCAGAGGTGAAAGGAATCGGCCCAAAA CTTGCTGAACGCTTGGCCGGGCTTGGATTACTGCTCGTAAAAGATTTGCTGCAGTACTACCCCAGGGACTATGTGGATTA TTCCTCGTTGCGGCGTATCCAGGCTCTAGAGGCAGGGGAGGCGGCCACGATTGTGGCCACAGTGAGGCGTTGTCATGGCT TCACCAGTCCACGCAACCCAAATTTGTCCATTCTTGAGCTGCAGCTTCAAGACCCAACTGGTCGGCTCAAAGTGAGGAGA TTTTTCGCAGGTCGGCGTTTCAGCAGCCCTGCTTACCTCAAAAGCCAGTCACGCCTTTACCCGCCTGGAGTCACTGTGGC CGTAAGTGGATTGGTCAAAGGAGGTCCTTACGGCATGAGTTTTCAAGACCCTTTGATTGAGGTCATGGAGAGTCCGCATT CGCCGTTGCGATCGCAAAGCATTGGCCGGTTGTTGCCTGTGTATGCCCTCACTGAAGGCCTTACGGCTGACCGTTTTCGT GATCTGGTACGGCAGGTTTTACCTTTGGCAGCAAGTTGGCCTGAATCCCTGCCTGAACCACGTCGTCAGGCATTGCGTTT ACCCAGCAGAAGCGATGCCTTGATCGCAATTCATCATCCAGACGATCAGCACACATTGCAGTCTGCTCGACGTCGATTGG TCTTTGACGAGTTTCTTCTATTGCAGTTGGGGTTGCTCAAACGGCGAGCAGAGCTGCGCAGTTGTTCTGCTCCTGTATTG CAGACGGCAGGGCAGCGAGATGGCCTTGTCGCTCGCTTCCTGGAGCTTTTGCCATTCCCTCTCACAGGAGCTCAGCAGCG TGTGTTGAGGGAGATCGAAGCTGACCTGGTGCTCTCGGAACCAATGGCACGCCTCATTCAGGGAGATGTTGGTAGTGGCA AGACGGTTGTCGCCATAGCAGCCCTGCTCACAGCGGTAGAGGCCGGCTGGCAAGGCGCTTTCATGGCGCCCACTGAGGTC CTTGCCGAGCAGCACTACCGCACATTGTGTTGTTGGTTGCCTCAGTTACATGTCAGCGTCGAGTTGCTTACGGGGGCAAC CACTCGTATACGTCGCCGTCAGATCCTTGATGATCTCGTCAATGGATCCTTGAAAATACTGGTAGGCACCCATGCCTTAA TCGAAGATCCTGTTGCCTTTTCAAGACTGGGGCTGGTGGTGGTTGACGAACAGCATCGTTTTGGAGTGAAGCAGCGCAAC AGATTGTTGAACAAGGGGCTCCAGCCTCATCTTTTGACCATGACAGCAACGCCCATTCCTCGCACACTGGCACTTTCGTT GCATGGGGATTTGGATGTGAGTCAGATCGATGAATTACCTCCTGGTCGTACCCCCATTCAAACTCAGATGATTAGGGGCT GCGATCGGGATCAGGCCTATCAACTCATCCGTGATCAAGTGTCTCGTGGCCAGCGCGCTTATGTGGTGTTACCGCTGATC GAGGACTCCGAGAAACTTGATCTGCGTTCAGCAGTTAAGGTTCATAGCCATTTATCAGAACAGGTATTTGCGGAGTTCAC GGTTGGATTACTGCATGGACGTTTGAGTAGCTCAGAGAAGCAGGGCGTGATTCAATCCTTCGCAGCGGGTGAATGCCAGG TGCTGGTCTCTACCACTGTGGTGGAGGTAGGCGTGGATGTACCTCAAGCAAGTGTGATGGTGATCGACCACGCGGATCGC TTTGGCCTAGCCCAATTGCATCAACTGCGAGGTCGTGTGGGACGTGGCGCAGCGGCGTCCCATTGCGTACTGATCAATGA CAGCACAAACCCTTTAGCGAGGCAGCGACTTGAAGTCCTTGTGCGCTCCAGTGATGGCTTTGAGATTGCTGAGATTGACT TACGCTTGCGAGGGCCAGGGCAGGTACTTGGCACAAAACAGTCTGGATTGCCTGATTTGGCCCTGGCCAGCCTTGCAGAT GATGGGTCCGTACTTGAAGAGGCTCGTGATGAGGCTCAAAGACTGCTCAGCGATGATCCGAACCTGACTGACCACTCTCG GCTCAAGGAATTGCTGGAGGCACAGTGGAAGCACCTGAGTGGCACAGCCCATCTGAATTGA
Upstream 100 bases:
>100_bases GTCGGGCTCAACTCAAGCGACATCGCCTTACCTTGCTCAAAATGGTTCGACAACAGCGGCACTGGCAACGTCGCGCCATG GCTCAGGAGGTAAAGCAACA
Downstream 100 bases:
>100_bases GTCCATTGATTTTTTCCACACACTTGAGACTCGTTTGAGTCTTAATACTCAGAAATTACGAGCCGATGTGCCTTCTGCTA CGTCGGTTGCCGGGCTGGCT
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MVAEPFRQSSNQSTQGLSTDQLQHLLSWMRILQQALTLEAENGFKNLEGRQENFHAFLVRQLAEPPSGLLPTKSQARLSQ LAEAFASYPDSSESARRRLVTDSRQLLHGIRQGLEPPAPIGPPRLKQGEAERQRQMPLPSGNRSLKLESPLSEVKGIGPK LAERLAGLGLLLVKDLLQYYPRDYVDYSSLRRIQALEAGEAATIVATVRRCHGFTSPRNPNLSILELQLQDPTGRLKVRR FFAGRRFSSPAYLKSQSRLYPPGVTVAVSGLVKGGPYGMSFQDPLIEVMESPHSPLRSQSIGRLLPVYALTEGLTADRFR DLVRQVLPLAASWPESLPEPRRQALRLPSRSDALIAIHHPDDQHTLQSARRRLVFDEFLLLQLGLLKRRAELRSCSAPVL QTAGQRDGLVARFLELLPFPLTGAQQRVLREIEADLVLSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAFMAPTEV LAEQHYRTLCCWLPQLHVSVELLTGATTRIRRRQILDDLVNGSLKILVGTHALIEDPVAFSRLGLVVVDEQHRFGVKQRN RLLNKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIQTQMIRGCDRDQAYQLIRDQVSRGQRAYVVLPLI EDSEKLDLRSAVKVHSHLSEQVFAEFTVGLLHGRLSSSEKQGVIQSFAAGECQVLVSTTVVEVGVDVPQASVMVIDHADR FGLAQLHQLRGRVGRGAAASHCVLINDSTNPLARQRLEVLVRSSDGFEIAEIDLRLRGPGQVLGTKQSGLPDLALASLAD DGSVLEEARDEAQRLLSDDPNLTDHSRLKELLEAQWKHLSGTAHLN
Sequences:
>Translated_846_residues MVAEPFRQSSNQSTQGLSTDQLQHLLSWMRILQQALTLEAENGFKNLEGRQENFHAFLVRQLAEPPSGLLPTKSQARLSQ LAEAFASYPDSSESARRRLVTDSRQLLHGIRQGLEPPAPIGPPRLKQGEAERQRQMPLPSGNRSLKLESPLSEVKGIGPK LAERLAGLGLLLVKDLLQYYPRDYVDYSSLRRIQALEAGEAATIVATVRRCHGFTSPRNPNLSILELQLQDPTGRLKVRR FFAGRRFSSPAYLKSQSRLYPPGVTVAVSGLVKGGPYGMSFQDPLIEVMESPHSPLRSQSIGRLLPVYALTEGLTADRFR DLVRQVLPLAASWPESLPEPRRQALRLPSRSDALIAIHHPDDQHTLQSARRRLVFDEFLLLQLGLLKRRAELRSCSAPVL QTAGQRDGLVARFLELLPFPLTGAQQRVLREIEADLVLSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAFMAPTEV LAEQHYRTLCCWLPQLHVSVELLTGATTRIRRRQILDDLVNGSLKILVGTHALIEDPVAFSRLGLVVVDEQHRFGVKQRN RLLNKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIQTQMIRGCDRDQAYQLIRDQVSRGQRAYVVLPLI EDSEKLDLRSAVKVHSHLSEQVFAEFTVGLLHGRLSSSEKQGVIQSFAAGECQVLVSTTVVEVGVDVPQASVMVIDHADR FGLAQLHQLRGRVGRGAAASHCVLINDSTNPLARQRLEVLVRSSDGFEIAEIDLRLRGPGQVLGTKQSGLPDLALASLAD DGSVLEEARDEAQRLLSDDPNLTDHSRLKELLEAQWKHLSGTAHLN >Mature_846_residues MVAEPFRQSSNQSTQGLSTDQLQHLLSWMRILQQALTLEAENGFKNLEGRQENFHAFLVRQLAEPPSGLLPTKSQARLSQ LAEAFASYPDSSESARRRLVTDSRQLLHGIRQGLEPPAPIGPPRLKQGEAERQRQMPLPSGNRSLKLESPLSEVKGIGPK LAERLAGLGLLLVKDLLQYYPRDYVDYSSLRRIQALEAGEAATIVATVRRCHGFTSPRNPNLSILELQLQDPTGRLKVRR FFAGRRFSSPAYLKSQSRLYPPGVTVAVSGLVKGGPYGMSFQDPLIEVMESPHSPLRSQSIGRLLPVYALTEGLTADRFR DLVRQVLPLAASWPESLPEPRRQALRLPSRSDALIAIHHPDDQHTLQSARRRLVFDEFLLLQLGLLKRRAELRSCSAPVL QTAGQRDGLVARFLELLPFPLTGAQQRVLREIEADLVLSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAFMAPTEV LAEQHYRTLCCWLPQLHVSVELLTGATTRIRRRQILDDLVNGSLKILVGTHALIEDPVAFSRLGLVVVDEQHRFGVKQRN RLLNKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIQTQMIRGCDRDQAYQLIRDQVSRGQRAYVVLPLI EDSEKLDLRSAVKVHSHLSEQVFAEFTVGLLHGRLSSSEKQGVIQSFAAGECQVLVSTTVVEVGVDVPQASVMVIDHADR FGLAQLHQLRGRVGRGAAASHCVLINDSTNPLARQRLEVLVRSSDGFEIAEIDLRLRGPGQVLGTKQSGLPDLALASLAD DGSVLEEARDEAQRLLSDDPNLTDHSRLKELLEAQWKHLSGTAHLN
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=683, Percent_Identity=41.8740849194729, Blast_Score=416, Evalue=1e-117, Organism=Escherichia coli, GI1787357, Length=420, Percent_Identity=34.2857142857143, Blast_Score=232, Evalue=7e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 93453; Mature: 93453
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAEPFRQSSNQSTQGLSTDQLQHLLSWMRILQQALTLEAENGFKNLEGRQENFHAFLVR CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH QLAEPPSGLLPTKSQARLSQLAEAFASYPDSSESARRRLVTDSRQLLHGIRQGLEPPAPI HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GPPRLKQGEAERQRQMPLPSGNRSLKLESPLSEVKGIGPKLAERLAGLGLLLVKDLLQYY CCCCCCCCHHHHHHCCCCCCCCCCEEECCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHC PRDYVDYSSLRRIQALEAGEAATIVATVRRCHGFTSPRNPNLSILELQLQDPTGRLKVRR CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHH FFAGRRFSSPAYLKSQSRLYPPGVTVAVSGLVKGGPYGMSFQDPLIEVMESPHSPLRSQS HHHCCCCCCCHHHCCCCCCCCCCHHEEEHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHH IGRLLPVYALTEGLTADRFRDLVRQVLPLAASWPESLPEPRRQALRLPSRSDALIAIHHP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHCCCCCCCCEEEEECC DDQHTLQSARRRLVFDEFLLLQLGLLKRRAELRSCSAPVLQTAGQRDGLVARFLELLPFP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCC LTGAQQRVLREIEADLVLSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAFMAPTEV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH LAEQHYRTLCCWLPQLHVSVELLTGATTRIRRRQILDDLVNGSLKILVGTHALIEDPVAF HHHHHHHHHHHHHHHHHHEEEEHHCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHH SRLGLVVVDEQHRFGVKQRNRLLNKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELP HHCCEEEECCHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHCCC PGRTPIQTQMIRGCDRDQAYQLIRDQVSRGQRAYVVLPLIEDSEKLDLRSAVKVHSHLSE CCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHH QVFAEFTVGLLHGRLSSSEKQGVIQSFAAGECQVLVSTTVVEVGVDVPQASVMVIDHADR HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCEEEEEECCCC FGLAQLHQLRGRVGRGAAASHCVLINDSTNPLARQRLEVLVRSSDGFEIAEIDLRLRGPG CCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCC QVLGTKQSGLPDLALASLADDGSVLEEARDEAQRLLSDDPNLTDHSRLKELLEAQWKHLS CEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC GTAHLN CCCCCC >Mature Secondary Structure MVAEPFRQSSNQSTQGLSTDQLQHLLSWMRILQQALTLEAENGFKNLEGRQENFHAFLVR CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH QLAEPPSGLLPTKSQARLSQLAEAFASYPDSSESARRRLVTDSRQLLHGIRQGLEPPAPI HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GPPRLKQGEAERQRQMPLPSGNRSLKLESPLSEVKGIGPKLAERLAGLGLLLVKDLLQYY CCCCCCCCHHHHHHCCCCCCCCCCEEECCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHC PRDYVDYSSLRRIQALEAGEAATIVATVRRCHGFTSPRNPNLSILELQLQDPTGRLKVRR CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHH FFAGRRFSSPAYLKSQSRLYPPGVTVAVSGLVKGGPYGMSFQDPLIEVMESPHSPLRSQS HHHCCCCCCCHHHCCCCCCCCCCHHEEEHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHH IGRLLPVYALTEGLTADRFRDLVRQVLPLAASWPESLPEPRRQALRLPSRSDALIAIHHP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHCCCCCCCCEEEEECC DDQHTLQSARRRLVFDEFLLLQLGLLKRRAELRSCSAPVLQTAGQRDGLVARFLELLPFP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCC LTGAQQRVLREIEADLVLSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAFMAPTEV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH LAEQHYRTLCCWLPQLHVSVELLTGATTRIRRRQILDDLVNGSLKILVGTHALIEDPVAF HHHHHHHHHHHHHHHHHHEEEEHHCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHH SRLGLVVVDEQHRFGVKQRNRLLNKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELP HHCCEEEECCHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHCCC PGRTPIQTQMIRGCDRDQAYQLIRDQVSRGQRAYVVLPLIEDSEKLDLRSAVKVHSHLSE CCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHH QVFAEFTVGLLHGRLSSSEKQGVIQSFAAGECQVLVSTTVVEVGVDVPQASVMVIDHADR HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCEEEEEECCCC FGLAQLHQLRGRVGRGAAASHCVLINDSTNPLARQRLEVLVRSSDGFEIAEIDLRLRGPG CCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCC QVLGTKQSGLPDLALASLADDGSVLEEARDEAQRLLSDDPNLTDHSRLKELLEAQWKHLS CEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC GTAHLN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]