| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023362
Identifier: 124023362
GI number: 124023362
Start: 1449264
End: 1450433
Strand: Direct
Name: 124023362
Synonym: P9303_16601
Alternate gene names: NA
Gene position: 1449264-1450433 (Clockwise)
Preceding gene: 124023361
Following gene: 124023363
Centisome position: 54.02
GC content: 53.42
Gene sequence:
>1170_bases ATGTCTGGCTTTTGGCAACGGCGGAGGATCCCTCTGGCTTGGTTGCTACTGAGTCGTCAACCTTTGCGGCTTTTGGTTGC TCTGGCAGGAATCTGCTTCGCCGGAATCCTGATGTTCATGCAATTGGGTTTCCGAGATGGTTTGTTCGATGCCAGTGTCA CCGTGCATCGTCTCTTTGATGCTGACCTGGTGTTAATGAGCCCTCGCTCGATGAGCTCGATCAGCATGAGTGGATTTCCA AGGCGTCGGTTGGTGCAGTCCATGGCACATCCAGATGTCCAGGGCATCACGCCTGTGAACTGGAATTTTTTGCTTTGGAG AAATCCGCAAACCCTCACGACTCGTCAGATTCTTGCCTTAGGTTTTGAACCGGGGGATTCCCTGTTCACAGATCCTGAGC TTGCGGCCAAGGCAAAAGCGCTCACAAGTCGTGGCCGTGTTTTGTTTGATCAGCGTTCTCGAAATGAATTCGGACCTATT GCCAAGTGGTTTGATGAGGGCCGCATTGTCGAGACTGAGCTCGCCGGGAAAAGGGTTCGAGTGGCGGGGTTAGTCAGCCT GGGGCCATCGTTTGGAGCTGACGGCAATCTGCTCACCAGCAGGGAGACATTCCTTGATCTATTACCCAGCAATCCGCCTG GAAGCATTGAAATCGGTTTGCTAAGGCTGCGGCCAGGGGCAGATCCAGATGCTGTGGTTCGATCTCTAACGGCGAGTTTG CCCAACGATGTGAAGGTCTTTACCAAGGAAGCTTTCATTGAGTTTGAGAAGAATTACTGGCGAAGCAGTACTTCCATTGG CTTCATTTTCAGCCTCGGTGCAGCAATGGGTTTTGTTGTGGGGTGCGTGATTGTCTATCAAATCCTCTACACCGATGTCA GCGATCATCTGCCTGAGTACGCCACTCTGATGGCGATGGGTTATCGCTTGAAGACTCTTCTAGGCGTGGTAGCTCGCGAA GGGATCTTCCTGGCAGTGATGGGGTATGTGCCGGCCTATGCCGCCGGCCAGGCCCTATACGCCTTGGTACGTAGTTCGAC AAAACTGCCTGTGGCGATGGATCTTCCGCGTGCCGTGCTTGTTTTCAGCCTGATCCTGACAATGTGCATGGGCTCAGCGG TGCTGGCGATGCGCCGATTGGTCGATGCCGATCCTGCAGAGATTTTCTGA
Upstream 100 bases:
>100_bases CCCGCGTAGTTGAAGTTCGGGTCAGTCTTGACCAAAACTCAGCTTCTCGGGTGAGAAGTCTCGCGGGCATGAAGGTGATA GCTCGCTTTCAGCCCTCGTG
Downstream 100 bases:
>100_bases TGGGTCTGTTCTCTTTCAATCATTCGATCAGAAGACATCGCCATGAATGAAAAGCTCATGGTTGAAGTTCAGGGTCTCAG CCACTGGTTTGGCATTGGTG
Product: ABC transporter transmembrane protein
Products: NA
Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter Permease Protein; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSGFWQRRRIPLAWLLLSRQPLRLLVALAGICFAGILMFMQLGFRDGLFDASVTVHRLFDADLVLMSPRSMSSISMSGFP RRRLVQSMAHPDVQGITPVNWNFLLWRNPQTLTTRQILALGFEPGDSLFTDPELAAKAKALTSRGRVLFDQRSRNEFGPI AKWFDEGRIVETELAGKRVRVAGLVSLGPSFGADGNLLTSRETFLDLLPSNPPGSIEIGLLRLRPGADPDAVVRSLTASL PNDVKVFTKEAFIEFEKNYWRSSTSIGFIFSLGAAMGFVVGCVIVYQILYTDVSDHLPEYATLMAMGYRLKTLLGVVARE GIFLAVMGYVPAYAAGQALYALVRSSTKLPVAMDLPRAVLVFSLILTMCMGSAVLAMRRLVDADPAEIF
Sequences:
>Translated_389_residues MSGFWQRRRIPLAWLLLSRQPLRLLVALAGICFAGILMFMQLGFRDGLFDASVTVHRLFDADLVLMSPRSMSSISMSGFP RRRLVQSMAHPDVQGITPVNWNFLLWRNPQTLTTRQILALGFEPGDSLFTDPELAAKAKALTSRGRVLFDQRSRNEFGPI AKWFDEGRIVETELAGKRVRVAGLVSLGPSFGADGNLLTSRETFLDLLPSNPPGSIEIGLLRLRPGADPDAVVRSLTASL PNDVKVFTKEAFIEFEKNYWRSSTSIGFIFSLGAAMGFVVGCVIVYQILYTDVSDHLPEYATLMAMGYRLKTLLGVVARE GIFLAVMGYVPAYAAGQALYALVRSSTKLPVAMDLPRAVLVFSLILTMCMGSAVLAMRRLVDADPAEIF >Mature_388_residues SGFWQRRRIPLAWLLLSRQPLRLLVALAGICFAGILMFMQLGFRDGLFDASVTVHRLFDADLVLMSPRSMSSISMSGFPR RRLVQSMAHPDVQGITPVNWNFLLWRNPQTLTTRQILALGFEPGDSLFTDPELAAKAKALTSRGRVLFDQRSRNEFGPIA KWFDEGRIVETELAGKRVRVAGLVSLGPSFGADGNLLTSRETFLDLLPSNPPGSIEIGLLRLRPGADPDAVVRSLTASLP NDVKVFTKEAFIEFEKNYWRSSTSIGFIFSLGAAMGFVVGCVIVYQILYTDVSDHLPEYATLMAMGYRLKTLLGVVAREG IFLAVMGYVPAYAAGQALYALVRSSTKLPVAMDLPRAVLVFSLILTMCMGSAVLAMRRLVDADPAEIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42890; Mature: 42759
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGFWQRRRIPLAWLLLSRQPLRLLVALAGICFAGILMFMQLGFRDGLFDASVTVHRLFD CCCCHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC ADLVLMSPRSMSSISMSGFPRRRLVQSMAHPDVQGITPVNWNFLLWRNPQTLTTRQILAL CCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHC GFEPGDSLFTDPELAAKAKALTSRGRVLFDQRSRNEFGPIAKWFDEGRIVETELAGKRVR CCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCEEEEHHCCCEEE VAGLVSLGPSFGADGNLLTSRETFLDLLPSNPPGSIEIGLLRLRPGADPDAVVRSLTASL EEEEEECCCCCCCCCCEECCHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCC PNDVKVFTKEAFIEFEKNYWRSSTSIGFIFSLGAAMGFVVGCVIVYQILYTDVSDHLPEY CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLMAMGYRLKTLLGVVAREGIFLAVMGYVPAYAAGQALYALVRSSTKLPVAMDLPRAVL HHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHH VFSLILTMCMGSAVLAMRRLVDADPAEIF HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SGFWQRRRIPLAWLLLSRQPLRLLVALAGICFAGILMFMQLGFRDGLFDASVTVHRLFD CCCHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC ADLVLMSPRSMSSISMSGFPRRRLVQSMAHPDVQGITPVNWNFLLWRNPQTLTTRQILAL CCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHC GFEPGDSLFTDPELAAKAKALTSRGRVLFDQRSRNEFGPIAKWFDEGRIVETELAGKRVR CCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCEEEEHHCCCEEE VAGLVSLGPSFGADGNLLTSRETFLDLLPSNPPGSIEIGLLRLRPGADPDAVVRSLTASL EEEEEECCCCCCCCCCEECCHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCC PNDVKVFTKEAFIEFEKNYWRSSTSIGFIFSLGAAMGFVVGCVIVYQILYTDVSDHLPEY CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLMAMGYRLKTLLGVVAREGIFLAVMGYVPAYAAGQALYALVRSSTKLPVAMDLPRAVL HHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHH VFSLILTMCMGSAVLAMRRLVDADPAEIF HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA