| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023343
Identifier: 124023343
GI number: 124023343
Start: 1434262
End: 1435740
Strand: Reverse
Name: 124023343
Synonym: P9303_16411
Alternate gene names: NA
Gene position: 1435740-1434262 (Counterclockwise)
Preceding gene: 124023344
Following gene: 124023338
Centisome position: 53.52
GC content: 40.84
Gene sequence:
>1479_bases ATGGAAAGGTGGTTGTATATCTATTCTGTGTCTGCCTACGCCTATTTCCTTGATGCAATCCAACAAACAGACTTTCTCAA TTCAAGAGAGAAAGGGTCCGTTATTATTGGTGAAGCTGACCCAGATGATAGGAGTAACTGGGTCAATGATGGTTTAGTGA TTGGAATGTCCTGTGCCCTTAAACAGGGGAAAGGGGCCGAAGATCAAGGATTTAACCTATGGCCAGCAATTGGTCCCATT TTAGAAGGAGTAACATCAATAACCAATAAACGTGAATTTGCCAAAGATATTTTAAAAGCAGCACTAACTTACCCTGGCGA AATGCCTTCATTGTCTGAGGCAAATGAAACAAGTGAGGGAGGTTATGTTATTTGGGCACAAGACATTGAATATCATCCAA CCTGGGTAGAAAAGACTGGGGGAAATGCCAATGAAGTCTATGCTGGGATCACAGCACTTCTATGGGCCGGAAGGCAAGTT TTAGGAGATGATTTCATTATAGCTCCAGTACCTAGTAGTAGTATATTTAAAAATCTAGGCGACTTTGATACAGATGTTAT CCTTAATGGAAATGACGAGTCTGATTATCTGAAAATTCTACAACTTGATAATCTGCCAAGCAAGCAATCATCTGGGAAAG AGTGGAACTATTTATCGGTTTTATTCCAAAACGATATCATTGATGGTTTTCTTGGACAACAGTATACAGAAAATAATATG GACGCATTGCCAGGAAGCGTCTCTGCTGATACGAGAAAATTCTTGCCCGGTGAAGAATTACCCTATGCAATTCTTTCGGC GTGGAGTAATCCATCTCAACTAAGAGAAACCACTACGGATGGCCCTCCATGGAATAGCTACTACAATGGAGGTCTACCCT TCAATGCAGGTGCCTATTTCGGCGGAGCTGAAAGTTACCCAACAGATCTAGACCTTTCAGACTATCTAATCCCCACGAAA CAAAGCTTGCCAAGCCTGCAAATAGCAAGTGAGCAAGAAGACGTTGCTATTCTCAATTTTACTGGCTTAGGCAATGATCA AATTGATTTAAATATCAGCGTTAAAAATAATATCTCGCAAGACTTCATTTTGGGTTATTACTTGATTAAGGATGATCAAG GGAGTGTTCTCGATCCGCTTACTGGAGAACTTCTTACGCCTGGAGACGATGGATATCGCTCTGCAGCTCTGAATCAACTT AATCAGGTATCAGAGCTAACAAACCTAACTGGAAATGACAGCCCGTCAACGAATTGGGTAATTGAAGACCTAAAGGAAGA CGAACTAATTGCACCATTCGTACAAGTAATTGATAACCACAGACTTAATACGTTTTTTGCATTTGATGACGCCAATCCAG GCGGCTTCTCACATTTCAAGAATCTTGGAGTCAATAGCTATGGCGTAGATGTAAACTTTGATGGAAAGCCTGTTGATTAT AAAGATCTGATGATTGCTTTAACCTTCCCTGAGCTTTGA
Upstream 100 bases:
>100_bases GGTTATTTATATGAACAACTTTACGGCTTCAAGTAGAGTTCGCCTTTGCTGAGCTTTTTAATTACTACATTCAAGTTTCA AATTGATCAGCCTGGCTAGG
Downstream 100 bases:
>100_bases TTTAATTCAAGGCAATGGTTGGTTTGGCTCATGAATCAGTTCACCATATGATATCATTTATTTAAAGCCACTTCAAGGAT GTCTCCCTGAGCTGGATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MERWLYIYSVSAYAYFLDAIQQTDFLNSREKGSVIIGEADPDDRSNWVNDGLVIGMSCALKQGKGAEDQGFNLWPAIGPI LEGVTSITNKREFAKDILKAALTYPGEMPSLSEANETSEGGYVIWAQDIEYHPTWVEKTGGNANEVYAGITALLWAGRQV LGDDFIIAPVPSSSIFKNLGDFDTDVILNGNDESDYLKILQLDNLPSKQSSGKEWNYLSVLFQNDIIDGFLGQQYTENNM DALPGSVSADTRKFLPGEELPYAILSAWSNPSQLRETTTDGPPWNSYYNGGLPFNAGAYFGGAESYPTDLDLSDYLIPTK QSLPSLQIASEQEDVAILNFTGLGNDQIDLNISVKNNISQDFILGYYLIKDDQGSVLDPLTGELLTPGDDGYRSAALNQL NQVSELTNLTGNDSPSTNWVIEDLKEDELIAPFVQVIDNHRLNTFFAFDDANPGGFSHFKNLGVNSYGVDVNFDGKPVDY KDLMIALTFPEL
Sequences:
>Translated_492_residues MERWLYIYSVSAYAYFLDAIQQTDFLNSREKGSVIIGEADPDDRSNWVNDGLVIGMSCALKQGKGAEDQGFNLWPAIGPI LEGVTSITNKREFAKDILKAALTYPGEMPSLSEANETSEGGYVIWAQDIEYHPTWVEKTGGNANEVYAGITALLWAGRQV LGDDFIIAPVPSSSIFKNLGDFDTDVILNGNDESDYLKILQLDNLPSKQSSGKEWNYLSVLFQNDIIDGFLGQQYTENNM DALPGSVSADTRKFLPGEELPYAILSAWSNPSQLRETTTDGPPWNSYYNGGLPFNAGAYFGGAESYPTDLDLSDYLIPTK QSLPSLQIASEQEDVAILNFTGLGNDQIDLNISVKNNISQDFILGYYLIKDDQGSVLDPLTGELLTPGDDGYRSAALNQL NQVSELTNLTGNDSPSTNWVIEDLKEDELIAPFVQVIDNHRLNTFFAFDDANPGGFSHFKNLGVNSYGVDVNFDGKPVDY KDLMIALTFPEL >Mature_492_residues MERWLYIYSVSAYAYFLDAIQQTDFLNSREKGSVIIGEADPDDRSNWVNDGLVIGMSCALKQGKGAEDQGFNLWPAIGPI LEGVTSITNKREFAKDILKAALTYPGEMPSLSEANETSEGGYVIWAQDIEYHPTWVEKTGGNANEVYAGITALLWAGRQV LGDDFIIAPVPSSSIFKNLGDFDTDVILNGNDESDYLKILQLDNLPSKQSSGKEWNYLSVLFQNDIIDGFLGQQYTENNM DALPGSVSADTRKFLPGEELPYAILSAWSNPSQLRETTTDGPPWNSYYNGGLPFNAGAYFGGAESYPTDLDLSDYLIPTK QSLPSLQIASEQEDVAILNFTGLGNDQIDLNISVKNNISQDFILGYYLIKDDQGSVLDPLTGELLTPGDDGYRSAALNQL NQVSELTNLTGNDSPSTNWVIEDLKEDELIAPFVQVIDNHRLNTFFAFDDANPGGFSHFKNLGVNSYGVDVNFDGKPVDY KDLMIALTFPEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54183; Mature: 54183
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERWLYIYSVSAYAYFLDAIQQTDFLNSREKGSVIIGEADPDDRSNWVNDGLVIGMSCAL CCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHCCCCEEEEEEEHH KQGKGAEDQGFNLWPAIGPILEGVTSITNKREFAKDILKAALTYPGEMPSLSEANETSEG CCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GYVIWAQDIEYHPTWVEKTGGNANEVYAGITALLWAGRQVLGDDFIIAPVPSSSIFKNLG CEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHCHHHHCCCEEEEECCCHHHHHHCC DFDTDVILNGNDESDYLKILQLDNLPSKQSSGKEWNYLSVLFQNDIIDGFLGQQYTENNM CCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCC DALPGSVSADTRKFLPGEELPYAILSAWSNPSQLRETTTDGPPWNSYYNGGLPFNAGAYF CCCCCCCCCCHHHCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GGAESYPTDLDLSDYLIPTKQSLPSLQIASEQEDVAILNFTGLGNDQIDLNISVKNNISQ CCCCCCCCCCCCCCCCCCCHHCCCCEEECCCCCCEEEEEEECCCCCEEEEEEEECCCCCC DFILGYYLIKDDQGSVLDPLTGELLTPGDDGYRSAALNQLNQVSELTNLTGNDSPSTNWV CEEEEEEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH IEDLKEDELIAPFVQVIDNHRLNTFFAFDDANPGGFSHFKNLGVNSYGVDVNFDGKPVDY HHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCCCH KDLMIALTFPEL HHEEEEEECCCC >Mature Secondary Structure MERWLYIYSVSAYAYFLDAIQQTDFLNSREKGSVIIGEADPDDRSNWVNDGLVIGMSCAL CCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHCCCCEEEEEEEHH KQGKGAEDQGFNLWPAIGPILEGVTSITNKREFAKDILKAALTYPGEMPSLSEANETSEG CCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GYVIWAQDIEYHPTWVEKTGGNANEVYAGITALLWAGRQVLGDDFIIAPVPSSSIFKNLG CEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHCHHHHCCCEEEEECCCHHHHHHCC DFDTDVILNGNDESDYLKILQLDNLPSKQSSGKEWNYLSVLFQNDIIDGFLGQQYTENNM CCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCC DALPGSVSADTRKFLPGEELPYAILSAWSNPSQLRETTTDGPPWNSYYNGGLPFNAGAYF CCCCCCCCCCHHHCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GGAESYPTDLDLSDYLIPTKQSLPSLQIASEQEDVAILNFTGLGNDQIDLNISVKNNISQ CCCCCCCCCCCCCCCCCCCHHCCCCEEECCCCCCEEEEEEECCCCCEEEEEEEECCCCCC DFILGYYLIKDDQGSVLDPLTGELLTPGDDGYRSAALNQLNQVSELTNLTGNDSPSTNWV CEEEEEEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH IEDLKEDELIAPFVQVIDNHRLNTFFAFDDANPGGFSHFKNLGVNSYGVDVNFDGKPVDY HHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCCCH KDLMIALTFPEL HHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA