| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023296
Identifier: 124023296
GI number: 124023296
Start: 1401063
End: 1401317
Strand: Direct
Name: 124023296
Synonym: P9303_15941
Alternate gene names: NA
Gene position: 1401063-1401317 (Clockwise)
Preceding gene: 124023293
Following gene: 124023297
Centisome position: 52.23
GC content: 51.76
Gene sequence:
>255_bases ATGAGCTTCTACGAAGCGATTTGGCACGGTGAGGGAATTGGTGACGGAGGTGATTTAGAGGAGTCTCTCCAGGCTTATGT CGTGGTACAACCTGAAGATGGCGACTGGACAGAAGCCTGTGCGAAGGACGGGGCGAATCCTCATGTGGATCACTACTCTT CCTTCGACGCTTATCTTGATAACGCCGATGCAATCGAGACGATTCCGGTAACCCCGGCGATGATTGCAGGAGCTGTTCAA CAACTTTCCTCATGA
Upstream 100 bases:
>100_bases TAGGCTCGTCTCTCTCCATGCTTTATTTATCTATATACTTTGCATTAATTCTAGAAAAATTTATCTTTATGTGTATTATC TAAGCATTGAATCCTACAAC
Downstream 100 bases:
>100_bases GCGTTGTTTTAATCCGAAGGTTGCTGCGATTAGCCTCCGATGAGTGACTTCCCTATTGCCTTTGCTGGTTGCACGCCGGT GAATCATCTCTGGCCTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSFYEAIWHGEGIGDGGDLEESLQAYVVVQPEDGDWTEACAKDGANPHVDHYSSFDAYLDNADAIETIPVTPAMIAGAVQ QLSS
Sequences:
>Translated_84_residues MSFYEAIWHGEGIGDGGDLEESLQAYVVVQPEDGDWTEACAKDGANPHVDHYSSFDAYLDNADAIETIPVTPAMIAGAVQ QLSS >Mature_83_residues SFYEAIWHGEGIGDGGDLEESLQAYVVVQPEDGDWTEACAKDGANPHVDHYSSFDAYLDNADAIETIPVTPAMIAGAVQQ LSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8989; Mature: 8858
Theoretical pI: Translated: 3.58; Mature: 3.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYEAIWHGEGIGDGGDLEESLQAYVVVQPEDGDWTEACAKDGANPHVDHYSSFDAYLD CCHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHHCC NADAIETIPVTPAMIAGAVQQLSS CCCCCEECCCCHHHHHHHHHHHCC >Mature Secondary Structure SFYEAIWHGEGIGDGGDLEESLQAYVVVQPEDGDWTEACAKDGANPHVDHYSSFDAYLD CHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHHCC NADAIETIPVTPAMIAGAVQQLSS CCCCCEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA