| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023250
Identifier: 124023250
GI number: 124023250
Start: 1351226
End: 1352686
Strand: Reverse
Name: 124023250
Synonym: P9303_15481
Alternate gene names: NA
Gene position: 1352686-1351226 (Counterclockwise)
Preceding gene: 124023251
Following gene: 124023248
Centisome position: 50.42
GC content: 48.12
Gene sequence:
>1461_bases ATGTCTCTGCGCTCCCTAGGCCATTTAAGGCTGAAGACGATTGTCTACATCCCTTGTCGCTTTCCTGTCAGTTCGGCGGG GATTTTCTCGCTGCTTTTGATCCCAACGATCGTTCTCCTGCTTTTAAAGGGGCATCTGACATCTAGCCGCACAGACAGGT TAGGGACATTTGCTCGGTTGATGACAGAGATGACGTTGATCCAGAGTTTTCGAGGAGACCCGCAACGCCAAGCCCCGCGT CTATGGCAGGACCGCCTTGGGATGAACCTGGCCAAGGACCTTTGGCGACGTCAGGGTCGGGGTCTCTGGTGGCAGGCGTG GGCAAATGATGGCGAGGCTTATCTGCTTCTGCCAGAGATCCTTTGGCCGATGAGTGTTAATTCAAGCATTGCTTTTAAGC GTCTTGATGACATGGTTGTCATCGCTTCAGATGGCTTGCATCGTCAACAGCTACTCCAAAGCCTTGGTGAAGGATTTGTT GATTCTCCTGCTGGTCAATCGTCTTTACAGCGTTTTTGCAATTCTGTTCTACAACATGGGCCTGCGGTGACCTGGAGTCC CGATGGCTTGGCTTCAGTGAGTGGAGCCATGGCACCTCTCCTGCAGATTTCACGCTATGGATGTTTGTCATTGCGATTGG ACCGTAATCAACTCAAATGGCAAGGACTTGTTGGTTATCGTCCTTTTGGTTTGGCTCCAGTTGGCATCGATGCCAGCCCT TTTCAGTATCGCCCTATGGCGATCAAATTAGCAGCGAGCCCTGATACTGATCAGGCTCTGCTGAATATGCAAGTGAAGAG TATGGACTTGCTTTTTGGCAGTTTGCTTTCGAAGCAGATTATTCAGGATTCCCTTGATAAGAACTATGGCATAAATCAGC AATTAAGGGCGAGACTGGCATCACTACCACTTGATTTTAGCTTAGGCAAGCAGCGTAAAGGCCCTTTTCAAGCCAGCATT AAACTCCAACTTGATCTACCAGAGGGCTCCTCAGGATGGGAGCCAGTCATCGATACTATTAGTCAACGTCTGGAAGCTCG AGACTTCATTAGAGAAGATAAATCTGTTGTGCAAAAAGATCAAAATATTGATGTTGACTTTTCAGGACTTACGCTCTGGC GCCAACCTTACTCGGATGGTGAGAGAGTAGTTGGTGGGTGGGTTTGGCAACAACAAAATGGAAAACCTACCCGTTTTGGC ATTGCTCTTGGCGATTCACCCATGCTGACTGATATCTCTAATAAACCTATCGAACTAGTCCATCCTGATGTCATGAAACT GACTGCTGATACGGCTGGATTGTATCGGTTAGGCTTACTTAATGGATTCTGGCCTGCCCCAGTAAAACAAGCTAAGTTGT TAACGATGAACCTAAGTTATTTGCGGGGTGCCAAACTCAAAAAAACAGACTGGTGGTGGATGTCAGGTCAGCTGATATTG GAACAAGCTTCAACCCCCTGA
Upstream 100 bases:
>100_bases GTTGTCTATCTTTCAGTCGTTGATCGGCTTGATCGTCGTAGGCGCAAAAAGACAAATGAGAAAGTTTGATCCCCAGCTGC CATAAGGAAAGGGTGATTGG
Downstream 100 bases:
>100_bases GACATTTGGTCTGATGATCCAGTGTTGAGCTTTTCAGATTCCTTTTGTTCCCGTTTGCGACGTTCAGATTCGAGAATTTG TTCACTTAGTTCTACAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSLRSLGHLRLKTIVYIPCRFPVSSAGIFSLLLIPTIVLLLLKGHLTSSRTDRLGTFARLMTEMTLIQSFRGDPQRQAPR LWQDRLGMNLAKDLWRRQGRGLWWQAWANDGEAYLLLPEILWPMSVNSSIAFKRLDDMVVIASDGLHRQQLLQSLGEGFV DSPAGQSSLQRFCNSVLQHGPAVTWSPDGLASVSGAMAPLLQISRYGCLSLRLDRNQLKWQGLVGYRPFGLAPVGIDASP FQYRPMAIKLAASPDTDQALLNMQVKSMDLLFGSLLSKQIIQDSLDKNYGINQQLRARLASLPLDFSLGKQRKGPFQASI KLQLDLPEGSSGWEPVIDTISQRLEARDFIREDKSVVQKDQNIDVDFSGLTLWRQPYSDGERVVGGWVWQQQNGKPTRFG IALGDSPMLTDISNKPIELVHPDVMKLTADTAGLYRLGLLNGFWPAPVKQAKLLTMNLSYLRGAKLKKTDWWWMSGQLIL EQASTP
Sequences:
>Translated_486_residues MSLRSLGHLRLKTIVYIPCRFPVSSAGIFSLLLIPTIVLLLLKGHLTSSRTDRLGTFARLMTEMTLIQSFRGDPQRQAPR LWQDRLGMNLAKDLWRRQGRGLWWQAWANDGEAYLLLPEILWPMSVNSSIAFKRLDDMVVIASDGLHRQQLLQSLGEGFV DSPAGQSSLQRFCNSVLQHGPAVTWSPDGLASVSGAMAPLLQISRYGCLSLRLDRNQLKWQGLVGYRPFGLAPVGIDASP FQYRPMAIKLAASPDTDQALLNMQVKSMDLLFGSLLSKQIIQDSLDKNYGINQQLRARLASLPLDFSLGKQRKGPFQASI KLQLDLPEGSSGWEPVIDTISQRLEARDFIREDKSVVQKDQNIDVDFSGLTLWRQPYSDGERVVGGWVWQQQNGKPTRFG IALGDSPMLTDISNKPIELVHPDVMKLTADTAGLYRLGLLNGFWPAPVKQAKLLTMNLSYLRGAKLKKTDWWWMSGQLIL EQASTP >Mature_485_residues SLRSLGHLRLKTIVYIPCRFPVSSAGIFSLLLIPTIVLLLLKGHLTSSRTDRLGTFARLMTEMTLIQSFRGDPQRQAPRL WQDRLGMNLAKDLWRRQGRGLWWQAWANDGEAYLLLPEILWPMSVNSSIAFKRLDDMVVIASDGLHRQQLLQSLGEGFVD SPAGQSSLQRFCNSVLQHGPAVTWSPDGLASVSGAMAPLLQISRYGCLSLRLDRNQLKWQGLVGYRPFGLAPVGIDASPF QYRPMAIKLAASPDTDQALLNMQVKSMDLLFGSLLSKQIIQDSLDKNYGINQQLRARLASLPLDFSLGKQRKGPFQASIK LQLDLPEGSSGWEPVIDTISQRLEARDFIREDKSVVQKDQNIDVDFSGLTLWRQPYSDGERVVGGWVWQQQNGKPTRFGI ALGDSPMLTDISNKPIELVHPDVMKLTADTAGLYRLGLLNGFWPAPVKQAKLLTMNLSYLRGAKLKKTDWWWMSGQLILE QASTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54422; Mature: 54291
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRSLGHLRLKTIVYIPCRFPVSSAGIFSLLLIPTIVLLLLKGHLTSSRTDRLGTFARL CCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH MTEMTLIQSFRGDPQRQAPRLWQDRLGMNLAKDLWRRQGRGLWWQAWANDGEAYLLLPEI HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHH LWPMSVNSSIAFKRLDDMVVIASDGLHRQQLLQSLGEGFVDSPAGQSSLQRFCNSVLQHG HCCCCCCCCCHHEECCCEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC PAVTWSPDGLASVSGAMAPLLQISRYGCLSLRLDRNQLKWQGLVGYRPFGLAPVGIDASP CCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCCCCCEECCCCCCC FQYRPMAIKLAASPDTDQALLNMQVKSMDLLFGSLLSKQIIQDSLDKNYGINQQLRARLA CEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH SLPLDFSLGKQRKGPFQASIKLQLDLPEGSSGWEPVIDTISQRLEARDFIREDKSVVQKD HCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC QNIDVDFSGLTLWRQPYSDGERVVGGWVWQQQNGKPTRFGIALGDSPMLTDISNKPIELV CCCCEEECCEEEEECCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCEECCCCCCEEEE HPDVMKLTADTAGLYRLGLLNGFWPAPVKQAKLLTMNLSYLRGAKLKKTDWWWMSGQLIL CCCHHHEECCHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCEEEECCEEEE EQASTP ECCCCC >Mature Secondary Structure SLRSLGHLRLKTIVYIPCRFPVSSAGIFSLLLIPTIVLLLLKGHLTSSRTDRLGTFARL CCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH MTEMTLIQSFRGDPQRQAPRLWQDRLGMNLAKDLWRRQGRGLWWQAWANDGEAYLLLPEI HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHH LWPMSVNSSIAFKRLDDMVVIASDGLHRQQLLQSLGEGFVDSPAGQSSLQRFCNSVLQHG HCCCCCCCCCHHEECCCEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC PAVTWSPDGLASVSGAMAPLLQISRYGCLSLRLDRNQLKWQGLVGYRPFGLAPVGIDASP CCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCCCCCEECCCCCCC FQYRPMAIKLAASPDTDQALLNMQVKSMDLLFGSLLSKQIIQDSLDKNYGINQQLRARLA CEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH SLPLDFSLGKQRKGPFQASIKLQLDLPEGSSGWEPVIDTISQRLEARDFIREDKSVVQKD HCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC QNIDVDFSGLTLWRQPYSDGERVVGGWVWQQQNGKPTRFGIALGDSPMLTDISNKPIELV CCCCEEECCEEEEECCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCEECCCCCCEEEE HPDVMKLTADTAGLYRLGLLNGFWPAPVKQAKLLTMNLSYLRGAKLKKTDWWWMSGQLIL CCCHHHEECCHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCEEEECCEEEE EQASTP ECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA