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The map label for this gene is thf1 [H]

Identifier: 124023249

GI number: 124023249

Start: 1350507

End: 1351259

Strand: Direct

Name: thf1 [H]

Synonym: P9303_15471

Alternate gene names: 124023249

Gene position: 1350507-1351259 (Clockwise)

Preceding gene: 124023247

Following gene: 124023254

Centisome position: 50.34

GC content: 49.4

Gene sequence:

>753_bases
ATGCGAAAAGGTCGGGCCAAGCACTTGAGTGACCGAAAGACCATTGCTGACAGCAAACGTGCGTTTAATCATGATTTCCC
TCATGTCATCCCCTCGCTGTACAGACGTACAACCGATGAACTTCTTGTCGAGCTGCATCTCCTGAGCCACCAGAAGCATT
TCCACCCTGACGCACTCTTTGCTATTGGCCTTAGCCAAGTTTTTGATGTCTTCACCCGTGGTTACCGACCAGAAGCTCAC
GTCAAGACCTTGTTCGATGCACTATGTCGAAGCTGCGGCTTCGACCCAAATGCTTTGCGCAAGCAGGCCCAAAAAACTCT
TGAGTCGGTCCGTGGTCACGATCTTGAGGAGGTCCAAGGTTGGATCCAACAACAAGGCAAAGGGGCTCCTGAAGCTCTCG
CCCAGGCATTACGTAATACTGGCAGCAACACCTTTCATTACTCACGCCTAATGGCCGTGGGGTTGCTAAGCCTTCTCGCA
TCTGCCCAAGGTGATGAATCCTCTGATCCCGAAAAACTGAGCCAAATCGCCCATGAACTAAGTGAATCAGTTGGATTCAC
TAAAGCCAGAGTCGAAAAAGATCTGAACCTCTACAAGTCCAACCTCGAGAAGATGGCCCAGGCTGTAGAACTAAGTGAAC
AAATTCTCGAATCTGAACGTCGCAAACGGGAACAAAAGGAATCTGAAAAGCTCAACACTGGATCATCAGACCAAATGTCT
CAGGGGGTTGAAGCTTGTTCCAATATCAGCTGA

Upstream 100 bases:

>100_bases
GCCCTTTCCCCACGGCCCGACTCTTCAATCACAATCGGGATCATACTGCTCTGCTCGGTTTTCACGATCTTAACGGCGCC
GTGAGCAGCGCTATGGTCAG

Downstream 100 bases:

>100_bases
CCTGACATCCACCACCAGTCTGTTTTTTTGAGTTTGGCACCCCGCAAATAACTTAGGTTCATCGTTAACAACTTAGCTTG
TTTTACTGGGGCAGGCCAGA

Product: Thf1-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRKGRAKHLSDRKTIADSKRAFNHDFPHVIPSLYRRTTDELLVELHLLSHQKHFHPDALFAIGLSQVFDVFTRGYRPEAH
VKTLFDALCRSCGFDPNALRKQAQKTLESVRGHDLEEVQGWIQQQGKGAPEALAQALRNTGSNTFHYSRLMAVGLLSLLA
SAQGDESSDPEKLSQIAHELSESVGFTKARVEKDLNLYKSNLEKMAQAVELSEQILESERRKREQKESEKLNTGSSDQMS
QGVEACSNIS

Sequences:

>Translated_250_residues
MRKGRAKHLSDRKTIADSKRAFNHDFPHVIPSLYRRTTDELLVELHLLSHQKHFHPDALFAIGLSQVFDVFTRGYRPEAH
VKTLFDALCRSCGFDPNALRKQAQKTLESVRGHDLEEVQGWIQQQGKGAPEALAQALRNTGSNTFHYSRLMAVGLLSLLA
SAQGDESSDPEKLSQIAHELSESVGFTKARVEKDLNLYKSNLEKMAQAVELSEQILESERRKREQKESEKLNTGSSDQMS
QGVEACSNIS
>Mature_250_residues
MRKGRAKHLSDRKTIADSKRAFNHDFPHVIPSLYRRTTDELLVELHLLSHQKHFHPDALFAIGLSQVFDVFTRGYRPEAH
VKTLFDALCRSCGFDPNALRKQAQKTLESVRGHDLEEVQGWIQQQGKGAPEALAQALRNTGSNTFHYSRLMAVGLLSLLA
SAQGDESSDPEKLSQIAHELSESVGFTKARVEKDLNLYKSNLEKMAQAVELSEQILESERRKREQKESEKLNTGSSDQMS
QGVEACSNIS

Specific function: May be involved in photosynthetic membrane biogenesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the THF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017499 [H]

Pfam domain/function: PF11264 ThylakoidFormat [H]

EC number: NA

Molecular weight: Translated: 28099; Mature: 28099

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGRAKHLSDRKTIADSKRAFNHDFPHVIPSLYRRTTDELLVELHLLSHQKHFHPDALF
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AIGLSQVFDVFTRGYRPEAHVKTLFDALCRSCGFDPNALRKQAQKTLESVRGHDLEEVQG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
WIQQQGKGAPEALAQALRNTGSNTFHYSRLMAVGLLSLLASAQGDESSDPEKLSQIAHEL
HHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SESVGFTKARVEKDLNLYKSNLEKMAQAVELSEQILESERRKREQKESEKLNTGSSDQMS
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
QGVEACSNIS
HHHHHHHCCC
>Mature Secondary Structure
MRKGRAKHLSDRKTIADSKRAFNHDFPHVIPSLYRRTTDELLVELHLLSHQKHFHPDALF
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AIGLSQVFDVFTRGYRPEAHVKTLFDALCRSCGFDPNALRKQAQKTLESVRGHDLEEVQG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
WIQQQGKGAPEALAQALRNTGSNTFHYSRLMAVGLLSLLASAQGDESSDPEKLSQIAHEL
HHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SESVGFTKARVEKDLNLYKSNLEKMAQAVELSEQILESERRKREQKESEKLNTGSSDQMS
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
QGVEACSNIS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]