| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is malE [C]
Identifier: 124023230
GI number: 124023230
Start: 1331545
End: 1332813
Strand: Direct
Name: malE [C]
Synonym: P9303_15281
Alternate gene names: 124023230
Gene position: 1331545-1332813 (Clockwise)
Preceding gene: 124023229
Following gene: 124023231
Centisome position: 49.63
GC content: 46.41
Gene sequence:
>1269_bases ATGAAGAGAAGGACATTTTGGAAAATAGCTCTGCTGTTCTCTTTGACTAGCGTTGCACTATTTGCAAGCTGGGCCCTGAG CACTCGCCCTGTTCAGATCAACATCTTAATGCCAGCTCCATTTGCTGAGTCAACAACTGATCTAGTCCAAAAATTCAACA AAGATCATCACGGCAGTATCCAACTTCAGGTGACTCGAGGTCCACTTGAAACAGAAGCAGTATCGGATTTAGCCATCAGC AGTCTTCTTTTAGGTAAAAGTCCATTCGATGCACTTTTAATTGATGTCACTTGGTTGCCGAAATACGCCGCCGCAGGATG GCTTATTCCCTTGGATCCATGGATCGATCAACAACAGATTGATTCCATTGCTCCGGGGGCAATGCTTGGAAATAATTTCG ACGGGAAACTGTATCGATGGCCACTTGTGGCTGACATGGGATTGCTTTATTGGCGGACAGATTTGATGAGTGAACCACCG CGTACCCCTGAGGAACTCATTAAAGTTAGTCTTAAGCTCCAAAAAGAAGGCCGTATTGCTTTTGGCTATGTCTGGCAAGG CCGTCAATATGAAGGCCTAAGTTGTGTATTTCTAGAAGTTCTTGACGGATTTGGAGGACAATGGCTTGAACCCGAAACCG ATAATGTTGGCCTCGACAGCTCCGCAAGTCTTCAGGCTGCAAGTTGGTTGCGTGAACTGATCAGCAGTGGAGTGAGCCCC GAAGCAGTGATCAACTATGCCGAAAATGAAACTCTTCAAGCCTTTAAGTCTGGAGATGTTGCGCTAATGCGTAACTGGCC TTATGCCTGGGGAGAACTGCAGAAGCCTAACAGCGATGTTAGAGGCAATGTTGGAGTAACCACGATGGTTGCTACCGCTG CCAATCGATCCACATCAACCCTAGGCAGCTGGGGCTTCTCGATCCTCAAGGGCTCATCTAATCCTCAAGCTGCAGCAGAG GCCATTGCCTTCCTCACATCAACATCTGCACAAAAAAGACTGTTCTTGAACGACAGCTATACCCCAACTAAAGCAGAACT ATTTAAAGACCCAGAACTGCTCTCAAAATCACAAATTCTTCCGGAGCTTGCTAATGCCCTACAAAGCACTGATCAACGTC CAGCAACCCCTCTATATGCACAGATTAGTGATGTACTACAACGAAATCTGAGTTCAATTTTTACAGGCCAATCCACCGTT AGCGATGCAATGTCCAACGCCCAAGCAAACACCAAGAAGATTCTTATGGCGGCAAGAGAAACTAAATGA
Upstream 100 bases:
>100_bases ACAATGTGATAACGATTGCTATTGTTGACTCATGCACAGTCAAGGATTGGCCAGAAGAGCAAATGAAAAGTTTGGTTGAT AAAATAGAAGCTACGCAACC
Downstream 100 bases:
>100_bases TCCAATTGCTTCTATTCCCGGCAGCTCTATTAATTGCCTTCGTCTTTGGTATCCCTCTACTTCGTTATTCCTGGTTGAGC TTCCATGCTGATTCAGTCCT
Product: sugar ABC transporter substrate-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKRRTFWKIALLFSLTSVALFASWALSTRPVQINILMPAPFAESTTDLVQKFNKDHHGSIQLQVTRGPLETEAVSDLAIS SLLLGKSPFDALLIDVTWLPKYAAAGWLIPLDPWIDQQQIDSIAPGAMLGNNFDGKLYRWPLVADMGLLYWRTDLMSEPP RTPEELIKVSLKLQKEGRIAFGYVWQGRQYEGLSCVFLEVLDGFGGQWLEPETDNVGLDSSASLQAASWLRELISSGVSP EAVINYAENETLQAFKSGDVALMRNWPYAWGELQKPNSDVRGNVGVTTMVATAANRSTSTLGSWGFSILKGSSNPQAAAE AIAFLTSTSAQKRLFLNDSYTPTKAELFKDPELLSKSQILPELANALQSTDQRPATPLYAQISDVLQRNLSSIFTGQSTV SDAMSNAQANTKKILMAARETK
Sequences:
>Translated_422_residues MKRRTFWKIALLFSLTSVALFASWALSTRPVQINILMPAPFAESTTDLVQKFNKDHHGSIQLQVTRGPLETEAVSDLAIS SLLLGKSPFDALLIDVTWLPKYAAAGWLIPLDPWIDQQQIDSIAPGAMLGNNFDGKLYRWPLVADMGLLYWRTDLMSEPP RTPEELIKVSLKLQKEGRIAFGYVWQGRQYEGLSCVFLEVLDGFGGQWLEPETDNVGLDSSASLQAASWLRELISSGVSP EAVINYAENETLQAFKSGDVALMRNWPYAWGELQKPNSDVRGNVGVTTMVATAANRSTSTLGSWGFSILKGSSNPQAAAE AIAFLTSTSAQKRLFLNDSYTPTKAELFKDPELLSKSQILPELANALQSTDQRPATPLYAQISDVLQRNLSSIFTGQSTV SDAMSNAQANTKKILMAARETK >Mature_422_residues MKRRTFWKIALLFSLTSVALFASWALSTRPVQINILMPAPFAESTTDLVQKFNKDHHGSIQLQVTRGPLETEAVSDLAIS SLLLGKSPFDALLIDVTWLPKYAAAGWLIPLDPWIDQQQIDSIAPGAMLGNNFDGKLYRWPLVADMGLLYWRTDLMSEPP RTPEELIKVSLKLQKEGRIAFGYVWQGRQYEGLSCVFLEVLDGFGGQWLEPETDNVGLDSSASLQAASWLRELISSGVSP EAVINYAENETLQAFKSGDVALMRNWPYAWGELQKPNSDVRGNVGVTTMVATAANRSTSTLGSWGFSILKGSSNPQAAAE AIAFLTSTSAQKRLFLNDSYTPTKAELFKDPELLSKSQILPELANALQSTDQRPATPLYAQISDVLQRNLSSIFTGQSTV SDAMSNAQANTKKILMAARETK
Specific function: Probably part of a binding-protein-dependent transport system [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46413; Mature: 46413
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRTFWKIALLFSLTSVALFASWALSTRPVQINILMPAPFAESTTDLVQKFNKDHHGSI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEE QLQVTRGPLETEAVSDLAISSLLLGKSPFDALLIDVTWLPKYAAAGWLIPLDPWIDQQQI EEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHCCCEEECCCCCCHHHH DSIAPGAMLGNNFDGKLYRWPLVADMGLLYWRTDLMSEPPRTPEELIKVSLKLQKEGRIA HHCCCCHHCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCEE FGYVWQGRQYEGLSCVFLEVLDGFGGQWLEPETDNVGLDSSASLQAASWLRELISSGVSP EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH EAVINYAENETLQAFKSGDVALMRNWPYAWGELQKPNSDVRGNVGVTTMVATAANRSTST HHHEECCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCH LGSWGFSILKGSSNPQAAAEAIAFLTSTSAQKRLFLNDSYTPTKAELFKDPELLSKSQIL HHHCCHHEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHH PELANALQSTDQRPATPLYAQISDVLQRNLSSIFTGQSTVSDAMSNAQANTKKILMAARE HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHEEEECC TK CC >Mature Secondary Structure MKRRTFWKIALLFSLTSVALFASWALSTRPVQINILMPAPFAESTTDLVQKFNKDHHGSI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEE QLQVTRGPLETEAVSDLAISSLLLGKSPFDALLIDVTWLPKYAAAGWLIPLDPWIDQQQI EEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHCCCEEECCCCCCHHHH DSIAPGAMLGNNFDGKLYRWPLVADMGLLYWRTDLMSEPPRTPEELIKVSLKLQKEGRIA HHCCCCHHCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCEE FGYVWQGRQYEGLSCVFLEVLDGFGGQWLEPETDNVGLDSSASLQAASWLRELISSGVSP EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH EAVINYAENETLQAFKSGDVALMRNWPYAWGELQKPNSDVRGNVGVTTMVATAANRSTST HHHEECCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCH LGSWGFSILKGSSNPQAAAEAIAFLTSTSAQKRLFLNDSYTPTKAELFKDPELLSKSQIL HHHCCHHEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHH PELANALQSTDQRPATPLYAQISDVLQRNLSSIFTGQSTVSDAMSNAQANTKKILMAARE HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHEEEECC TK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]