Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124023160

Identifier: 124023160

GI number: 124023160

Start: 1252333

End: 1253391

Strand: Direct

Name: 124023160

Synonym: P9303_14561

Alternate gene names: NA

Gene position: 1252333-1253391 (Clockwise)

Preceding gene: 124023159

Following gene: 124023162

Centisome position: 46.68

GC content: 48.91

Gene sequence:

>1059_bases
ATGCAGTTGTCCTCGAGGCCTTCAAGCTTGGTTCTTGATCACCATCAAAATAAATTTTTAACGCCTTGGTCTGACCCTGC
CGACCCCCAGATTCTCTTTCCAATTCAACCTCTTGAACATTTACTCGTTCAGTTGGGTTGGCCTGATCCACAAGCTTGGC
TTATCCATTGGCAAAACCGAGGCGGCATATCGTTAAAAAGGCCTTTCTGGCATCCATCTACCCGCACCGATTGGATTTGG
GGGCTTGGTTTGCCTTTACTCACACTTGTGGAAGGTTGTCTTGGTAAAAGCGATCGATCATTGCTAGGTATTACAGGCCT
TCCGGGTTGCGGAAAGACGAGCCTTGGCTGTTGGCTCGAAGCCGCTGCTGGAGAACTGGGTTGGCCGATCAAGGTGATTT
CATTGGATGATTTTTATTGGCCATTCCCTGAACTCGATCGAAGCATGAGCGGTAATCCCTGGAGAGTGCCTAGAGCGCTT
CCAGGCAGCCATGATCTCGATTTGTTGGCCAGTGTGCTGGATACATGGCAGTCAACTGGTCACTTAAAAGCACCGATGTT
CGACAAAGCGCTCCGTCATGGTCGAGGTGATCGAGATGGCTGGCACCTTTCTGATCCAAAGGTACTTGTCATAGAAGGAT
GGATCCTTGGTTGCTTACCTTGCAAATTTGAAGAGGCAGACAAATTTTCGGATCAGCTCGTACCACCGCTGAACAAGCTT
GAGCATGATTATCGCCTTGTTGTCCAAGACGCTTTGAACGGCTATGTGCCGATATGGGACCGTTTAGATACTCTTTGGCA
CCTGAAAGCAATCGACCCAAGCTCTACACGAATTTGGAAAGCCAACCAGGAGAGCTTGATGCAACTAAATCGTGGTGTTT
GCCTGGATCAAGAATCGTTTGAGGGTTTTGTGCGCATGATCCTTGCCTCTATTCCCTTAACTTGTCTCGATGGAATAGAG
GCTGATGTCGTCGCTACCCTTACGCCTGCACGCCAGTTGATGTGGGTCGGTCAGAGGGGATATCAAGACTCATCATCATC
AGACTCTTGCATTGGATAA

Upstream 100 bases:

>100_bases
TTGATCATTGAGCTATTGGTCTTTTTGCGCAGCCGTGTTGAGATTGAGCCTTGGCCGTTGCACTGGTTGGCTTTGGACAA
CCTGAGGATTGGCGCGGTTT

Downstream 100 bases:

>100_bases
ACAAATCCTTGTGCTCGACCACTTAGAACCGATTTGCCGATTGATAGAGCGCGTTGAGCCGCTGTGGCGGCTTTAGCTTT
CCAGATGGCATGACGTTGAT

Product: kinase

Products: NA

Alternate protein names: Glycerate Kinase; Phosphoribulokinase/Uridine Kinase Family; Phosphoribulokinase/Uridine Kinase Family Protein; Kinase-Like Protein

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MQLSSRPSSLVLDHHQNKFLTPWSDPADPQILFPIQPLEHLLVQLGWPDPQAWLIHWQNRGGISLKRPFWHPSTRTDWIW
GLGLPLLTLVEGCLGKSDRSLLGITGLPGCGKTSLGCWLEAAAGELGWPIKVISLDDFYWPFPELDRSMSGNPWRVPRAL
PGSHDLDLLASVLDTWQSTGHLKAPMFDKALRHGRGDRDGWHLSDPKVLVIEGWILGCLPCKFEEADKFSDQLVPPLNKL
EHDYRLVVQDALNGYVPIWDRLDTLWHLKAIDPSSTRIWKANQESLMQLNRGVCLDQESFEGFVRMILASIPLTCLDGIE
ADVVATLTPARQLMWVGQRGYQDSSSSDSCIG

Sequences:

>Translated_352_residues
MQLSSRPSSLVLDHHQNKFLTPWSDPADPQILFPIQPLEHLLVQLGWPDPQAWLIHWQNRGGISLKRPFWHPSTRTDWIW
GLGLPLLTLVEGCLGKSDRSLLGITGLPGCGKTSLGCWLEAAAGELGWPIKVISLDDFYWPFPELDRSMSGNPWRVPRAL
PGSHDLDLLASVLDTWQSTGHLKAPMFDKALRHGRGDRDGWHLSDPKVLVIEGWILGCLPCKFEEADKFSDQLVPPLNKL
EHDYRLVVQDALNGYVPIWDRLDTLWHLKAIDPSSTRIWKANQESLMQLNRGVCLDQESFEGFVRMILASIPLTCLDGIE
ADVVATLTPARQLMWVGQRGYQDSSSSDSCIG
>Mature_352_residues
MQLSSRPSSLVLDHHQNKFLTPWSDPADPQILFPIQPLEHLLVQLGWPDPQAWLIHWQNRGGISLKRPFWHPSTRTDWIW
GLGLPLLTLVEGCLGKSDRSLLGITGLPGCGKTSLGCWLEAAAGELGWPIKVISLDDFYWPFPELDRSMSGNPWRVPRAL
PGSHDLDLLASVLDTWQSTGHLKAPMFDKALRHGRGDRDGWHLSDPKVLVIEGWILGCLPCKFEEADKFSDQLVPPLNKL
EHDYRLVVQDALNGYVPIWDRLDTLWHLKAIDPSSTRIWKANQESLMQLNRGVCLDQESFEGFVRMILASIPLTCLDGIE
ADVVATLTPARQLMWVGQRGYQDSSSSDSCIG

Specific function: Unknown

COG id: COG4240

COG function: function code R; Predicted kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39574; Mature: 39574

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSSRPSSLVLDHHQNKFLTPWSDPADPQILFPIQPLEHLLVQLGWPDPQAWLIHWQNR
CCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCEEEEEEECC
GGISLKRPFWHPSTRTDWIWGLGLPLLTLVEGCLGKSDRSLLGITGLPGCGKTSLGCWLE
CCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHH
AAAGELGWPIKVISLDDFYWPFPELDRSMSGNPWRVPRALPGSHDLDLLASVLDTWQSTG
HHCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCC
HLKAPMFDKALRHGRGDRDGWHLSDPKVLVIEGWILGCLPCKFEEADKFSDQLVPPLNKL
CCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECEEEEECCCCCCHHHHHHHHCCCCHHHH
EHDYRLVVQDALNGYVPIWDRLDTLWHLKAIDPSSTRIWKANQESLMQLNRGVCLDQESF
CHHHHHHHHHHHCCCCCHHHHHHHHEEEEECCCCCCEEEECCHHHHHHHHCCCCCCHHHH
EGFVRMILASIPLTCLDGIEADVVATLTPARQLMWVGQRGYQDSSSSDSCIG
HHHHHHHHHHCCHHHHCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQLSSRPSSLVLDHHQNKFLTPWSDPADPQILFPIQPLEHLLVQLGWPDPQAWLIHWQNR
CCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCEEEEEEECC
GGISLKRPFWHPSTRTDWIWGLGLPLLTLVEGCLGKSDRSLLGITGLPGCGKTSLGCWLE
CCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHH
AAAGELGWPIKVISLDDFYWPFPELDRSMSGNPWRVPRALPGSHDLDLLASVLDTWQSTG
HHCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCC
HLKAPMFDKALRHGRGDRDGWHLSDPKVLVIEGWILGCLPCKFEEADKFSDQLVPPLNKL
CCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECEEEEECCCCCCHHHHHHHHCCCCHHHH
EHDYRLVVQDALNGYVPIWDRLDTLWHLKAIDPSSTRIWKANQESLMQLNRGVCLDQESF
CHHHHHHHHHHHCCCCCHHHHHHHHEEEEECCCCCCEEEECCHHHHHHHHCCCCCCHHHH
EGFVRMILASIPLTCLDGIEADVVATLTPARQLMWVGQRGYQDSSSSDSCIG
HHHHHHHHHHCCHHHHCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA