| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is yfeJ [H]
Identifier: 124023116
GI number: 124023116
Start: 1207143
End: 1207886
Strand: Direct
Name: yfeJ [H]
Synonym: P9303_14111
Alternate gene names: 124023116
Gene position: 1207143-1207886 (Clockwise)
Preceding gene: 124023115
Following gene: 124023117
Centisome position: 45.0
GC content: 48.39
Gene sequence:
>744_bases ATGACTCCCCTCTTTGTTGTTCAACATTTAGAACGTGAAACTCCTGGTTTGTTTCAAGACCTTGCACAACAACATGGGAT GGCAGTCCAAGTCATCCGTGTGGACCTAGGGGAACCTTTGCCTTCTTTGGTCAAAGGAGATGGTTTGCTGGTCCTAGGAG GACCGATGGGCGTAGCGGATCTGTATAAACCAGCCTTCCCATGGTTAGAGGATGAGGTTCTCTTAATTCAACAAGCCTTG GAGCATCAGATCCCTTTTGTTGGTGTCTGTCTTGGAGCACAGTTACTTGCACATGCTGCTGGTGGAGGCGTTGAACCGCT GTTGGGCGGCGATCCACCGCGCCCCCTTGCGGAAGTCGGGTGGGCACCAATTACATCAACGCTCGAGGCAGCAAATCAGT CACTGATAACGTCTTTAATGCAGCCACTTGATGTTTTGCATTGGCATGGCGATAGGATAATTCTGCCAGAAACTGCCAAC GTTCTTGCCACTAGTGTTCGCTGTCGTGAGCAATTGTTTAGAATTGGACCGTTGGCATATGGCCTCCAGTTTCATCTAGA GGTCGAGGATCAAGATGTTTTTCGTTGGATTGCTGAAGACAATGATTTTATCTGTGGGGCCCTTGGCGAGAACGCAGCAG ATATCTTGCGAGATCAGCAGCGACTATATAGCAGTAGTAGTAGACCTAGACGGCTAAAATTGCTTGCAGATTTATTTCGC GAGCTATGGCCATCATATTTTTAG
Upstream 100 bases:
>100_bases GATCTCGTTTCAGGAGCCAACCCTTATCAATCAGTCTGTTGATAGAGCTATAGCGGTTAAACTCAACAATATCAGTGCAA CAAATTCATTTTCTATTCAA
Downstream 100 bases:
>100_bases ATCATTAGATATTCTTTAATCTATTGCGACGGAATCTTGATCTGCTTATGGTTTAATTGAACAATTAAAACTTAATAAAT CAGTCCCTAGTTTTTCAATG
Product: glutamine amidotransferase class-I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTPLFVVQHLERETPGLFQDLAQQHGMAVQVIRVDLGEPLPSLVKGDGLLVLGGPMGVADLYKPAFPWLEDEVLLIQQAL EHQIPFVGVCLGAQLLAHAAGGGVEPLLGGDPPRPLAEVGWAPITSTLEAANQSLITSLMQPLDVLHWHGDRIILPETAN VLATSVRCREQLFRIGPLAYGLQFHLEVEDQDVFRWIAEDNDFICGALGENAADILRDQQRLYSSSSRPRRLKLLADLFR ELWPSYF
Sequences:
>Translated_247_residues MTPLFVVQHLERETPGLFQDLAQQHGMAVQVIRVDLGEPLPSLVKGDGLLVLGGPMGVADLYKPAFPWLEDEVLLIQQAL EHQIPFVGVCLGAQLLAHAAGGGVEPLLGGDPPRPLAEVGWAPITSTLEAANQSLITSLMQPLDVLHWHGDRIILPETAN VLATSVRCREQLFRIGPLAYGLQFHLEVEDQDVFRWIAEDNDFICGALGENAADILRDQQRLYSSSSRPRRLKLLADLFR ELWPSYF >Mature_246_residues TPLFVVQHLERETPGLFQDLAQQHGMAVQVIRVDLGEPLPSLVKGDGLLVLGGPMGVADLYKPAFPWLEDEVLLIQQALE HQIPFVGVCLGAQLLAHAAGGGVEPLLGGDPPRPLAEVGWAPITSTLEAANQSLITSLMQPLDVLHWHGDRIILPETANV LATSVRCREQLFRIGPLAYGLQFHLEVEDQDVFRWIAEDNDFICGALGENAADILRDQQRLYSSSSRPRRLKLLADLFRE LWPSYF
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: NA
Molecular weight: Translated: 27311; Mature: 27180
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLFVVQHLERETPGLFQDLAQQHGMAVQVIRVDLGEPLPSLVKGDGLLVLGGPMGVAD CCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHCCCCEEEEECCCCHHH LYKPAFPWLEDEVLLIQQALEHQIPFVGVCLGAQLLAHAAGGGVEPLLGGDPPRPLAEVG HHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC WAPITSTLEAANQSLITSLMQPLDVLHWHGDRIILPETANVLATSVRCREQLFRIGPLAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEE GLQFHLEVEDQDVFRWIAEDNDFICGALGENAADILRDQQRLYSSSSRPRRLKLLADLFR CEEEEEEECHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ELWPSYF HHCCCCC >Mature Secondary Structure TPLFVVQHLERETPGLFQDLAQQHGMAVQVIRVDLGEPLPSLVKGDGLLVLGGPMGVAD CHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHCCCCEEEEECCCCHHH LYKPAFPWLEDEVLLIQQALEHQIPFVGVCLGAQLLAHAAGGGVEPLLGGDPPRPLAEVG HHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC WAPITSTLEAANQSLITSLMQPLDVLHWHGDRIILPETANVLATSVRCREQLFRIGPLAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEE GLQFHLEVEDQDVFRWIAEDNDFICGALGENAADILRDQQRLYSSSSRPRRLKLLADLFR CEEEEEEECHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ELWPSYF HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]