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The map label for this gene is 124023112

Identifier: 124023112

GI number: 124023112

Start: 1202426

End: 1204021

Strand: Direct

Name: 124023112

Synonym: P9303_14071

Alternate gene names: NA

Gene position: 1202426-1204021 (Clockwise)

Preceding gene: 124023111

Following gene: 124023115

Centisome position: 44.82

GC content: 49.5

Gene sequence:

>1596_bases
ATGAAACTCTTCCAGCAATTGCTGGTGGCACCTGCTGCTTTGGGCCTGATGGCCCCTATGGCTGCTAATGCCGCAGACCT
AGACATCAAAGGTGTGTCCGATTATTCGGCCTCCAGCGAGCAGGTCACCAGCATCTCCCAATTCCAAGATGTTTACCCAA
CCGACTGGGCTTATCAGGCTCTGAGCAACCTGATTGAGCGCTACGGCTGTGTGGCTGGCTATCCAAGCGGTAGCTACTTG
GGCAACAGAGCAATGACCCGCTTTGAAGCGGCTGCTCTATTGAATGCCTGCCTCGATCGCATCACTGAAGTCACCGACGA
ACTGCGTCGCTTGCTGCAGGAATTCGAGCAGGAGCTCGCCATCCTCAAGGGCCGTGTTGATGGGCTAGAAGCCCGCGTTG
GTGAACTCGAAGCCACTCAGTTCTCCACCACCACCAAGCTTGTTGGTCAGACATCCTTCGTGATTGGTGCCAACAGCTTT
GGTGGCTCACTTGACGACGCAAGAGATATCTATAACAAAGAGTGGGGTTCAACCAGCTTCAACTATGACCTTCAGCTTGT
GCTGAACACGAGCTTTACAGGTAAGGACACACTGTCTACTACTTTGCGTGCAGGTAATTTCGGAAAGACTGTATTCGGAG
GAGATGGTCCTACAAACCTCTCCACCTTGGAAGTTGCGTCTGAGGCAGAAGGTGGTGCCGATGTCGTCTATATCGACAAG
ATTTTCTACCAACTCCCGATTGGTGAGAGCTTCACCGCAACTCTTGGTGCAATCGTTGGCCAGGAAGACATGCTTGCAAT
TTGGCCAACGGCCTATGCAAGTGATGGATCTTCAACGGTTTTGGATGTCGTCACATTACCTGGTGCATCAGTAGGTGCTT
TCAACAAAAACCTGGGTCAGGGTGCTGGTATTTGGTGGGAGAACAACGGTTGGGCAATCAGTGCCAATTATGTCGCTGCT
AATGGACATAACGGTGATCCCAATTCCAATGATGATCCTTGTGGTGGCATAGCTAATGATTGTTCAGCTGGTACAGGAAC
TGCTCAAATCGGATATACCGATGAGCAGTGGGGTGTCGCTGCGACCTATAGCTATCTTCAAAATAATGATCTTGTCCTTT
ACTCCAGCATCTATGTAGCTGATAGCTACGGATTCACTTCTGGAACCGATAGCTATACAAATGCCTTCGCATTGTCTGCA
TACTGGATGCCTCAAGAGAATGGTTGGATCCCTTCAGTCAGCCTTGGCTGGGGCATCAATTCAACCAGCTTTGACGTTGA
CGATGATGTTTACGATGGAGAAGTTTCTCAGTCGCAGTCATGGATGGTTGGTCTCGAATGGAATGATCTGTTTGTTGAAG
GTAACGCTGGTGGTTTCGCGATTGGCCAGGCACCATTCGCAACCAGACTCAAAGATGGAGATACACCTCATGATGGAAAC
TATGTTTCCGAGCTGTGGTATAAGTTCCAGGCGACTGACAACATTGTTGTTACCCCAGGCCTCTTCTATCTGAGCCGTTC
TGCCTCAGGGCTTATGGATACTGATAAAACACTAAACCAGTTTGGTGGTGTATTTAGAACGACATTTAGCTTCTAG

Upstream 100 bases:

>100_bases
AGCAATTGCTGCGGTTGAAGGAATGAATAGCATCCGCATGGTTAATACTATTAACAGACTATTATTAATCTCTTTTGCCA
CCTTTCGTGTTGGGAACCAA

Downstream 100 bases:

>100_bases
CTTGTTAAGCTTTGACTTGCATCAACAGGTTGATATTTCAAAGTTGTGCTAGAAGAAAATCGAGAGCGTTTTTTTAGACT
CCTTCATATGTCAATTGTTG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQALSNLIERYGCVAGYPSGSYL
GNRAMTRFEAAALLNACLDRITEVTDELRRLLQEFEQELAILKGRVDGLEARVGELEATQFSTTTKLVGQTSFVIGANSF
GGSLDDARDIYNKEWGSTSFNYDLQLVLNTSFTGKDTLSTTLRAGNFGKTVFGGDGPTNLSTLEVASEAEGGADVVYIDK
IFYQLPIGESFTATLGAIVGQEDMLAIWPTAYASDGSSTVLDVVTLPGASVGAFNKNLGQGAGIWWENNGWAISANYVAA
NGHNGDPNSNDDPCGGIANDCSAGTGTAQIGYTDEQWGVAATYSYLQNNDLVLYSSIYVADSYGFTSGTDSYTNAFALSA
YWMPQENGWIPSVSLGWGINSTSFDVDDDVYDGEVSQSQSWMVGLEWNDLFVEGNAGGFAIGQAPFATRLKDGDTPHDGN
YVSELWYKFQATDNIVVTPGLFYLSRSASGLMDTDKTLNQFGGVFRTTFSF

Sequences:

>Translated_531_residues
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQALSNLIERYGCVAGYPSGSYL
GNRAMTRFEAAALLNACLDRITEVTDELRRLLQEFEQELAILKGRVDGLEARVGELEATQFSTTTKLVGQTSFVIGANSF
GGSLDDARDIYNKEWGSTSFNYDLQLVLNTSFTGKDTLSTTLRAGNFGKTVFGGDGPTNLSTLEVASEAEGGADVVYIDK
IFYQLPIGESFTATLGAIVGQEDMLAIWPTAYASDGSSTVLDVVTLPGASVGAFNKNLGQGAGIWWENNGWAISANYVAA
NGHNGDPNSNDDPCGGIANDCSAGTGTAQIGYTDEQWGVAATYSYLQNNDLVLYSSIYVADSYGFTSGTDSYTNAFALSA
YWMPQENGWIPSVSLGWGINSTSFDVDDDVYDGEVSQSQSWMVGLEWNDLFVEGNAGGFAIGQAPFATRLKDGDTPHDGN
YVSELWYKFQATDNIVVTPGLFYLSRSASGLMDTDKTLNQFGGVFRTTFSF
>Mature_531_residues
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQALSNLIERYGCVAGYPSGSYL
GNRAMTRFEAAALLNACLDRITEVTDELRRLLQEFEQELAILKGRVDGLEARVGELEATQFSTTTKLVGQTSFVIGANSF
GGSLDDARDIYNKEWGSTSFNYDLQLVLNTSFTGKDTLSTTLRAGNFGKTVFGGDGPTNLSTLEVASEAEGGADVVYIDK
IFYQLPIGESFTATLGAIVGQEDMLAIWPTAYASDGSSTVLDVVTLPGASVGAFNKNLGQGAGIWWENNGWAISANYVAA
NGHNGDPNSNDDPCGGIANDCSAGTGTAQIGYTDEQWGVAATYSYLQNNDLVLYSSIYVADSYGFTSGTDSYTNAFALSA
YWMPQENGWIPSVSLGWGINSTSFDVDDDVYDGEVSQSQSWMVGLEWNDLFVEGNAGGFAIGQAPFATRLKDGDTPHDGN
YVSELWYKFQATDNIVVTPGLFYLSRSASGLMDTDKTLNQFGGVFRTTFSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 57035; Mature: 57035

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQA
CHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
LSNLIERYGCVAGYPSGSYLGNRAMTRFEAAALLNACLDRITEVTDELRRLLQEFEQELA
HHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKGRVDGLEARVGELEATQFSTTTKLVGQTSFVIGANSFGGSLDDARDIYNKEWGSTSF
HHHCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCC
NYDLQLVLNTSFTGKDTLSTTLRAGNFGKTVFGGDGPTNLSTLEVASEAEGGADVVYIDK
CEEEEEEEECCCCCCHHHHHHHCCCCCCCEEECCCCCCCCEEEEEHHCCCCCCCEEEEEE
IFYQLPIGESFTATLGAIVGQEDMLAIWPTAYASDGSSTVLDVVTLPGASVGAFNKNLGQ
EEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC
GAGIWWENNGWAISANYVAANGHNGDPNSNDDPCGGIANDCSAGTGTAQIGYTDEQWGVA
CCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHH
ATYSYLQNNDLVLYSSIYVADSYGFTSGTDSYTNAFALSAYWMPQENGWIPSVSLGWGIN
HHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCC
STSFDVDDDVYDGEVSQSQSWMVGLEWNDLFVEGNAGGFAIGQAPFATRLKDGDTPHDGN
CCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEECCCCCEEECCCCCHHHCCCCCCCCCCC
YVSELWYKFQATDNIVVTPGLFYLSRSASGLMDTDKTLNQFGGVFRTTFSF
HHHHHHEEEECCCCEEECCCCEEEECCCCCCCCCHHHHHHHCCHHEEECCC
>Mature Secondary Structure
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQA
CHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
LSNLIERYGCVAGYPSGSYLGNRAMTRFEAAALLNACLDRITEVTDELRRLLQEFEQELA
HHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKGRVDGLEARVGELEATQFSTTTKLVGQTSFVIGANSFGGSLDDARDIYNKEWGSTSF
HHHCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCC
NYDLQLVLNTSFTGKDTLSTTLRAGNFGKTVFGGDGPTNLSTLEVASEAEGGADVVYIDK
CEEEEEEEECCCCCCHHHHHHHCCCCCCCEEECCCCCCCCEEEEEHHCCCCCCCEEEEEE
IFYQLPIGESFTATLGAIVGQEDMLAIWPTAYASDGSSTVLDVVTLPGASVGAFNKNLGQ
EEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC
GAGIWWENNGWAISANYVAANGHNGDPNSNDDPCGGIANDCSAGTGTAQIGYTDEQWGVA
CCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHH
ATYSYLQNNDLVLYSSIYVADSYGFTSGTDSYTNAFALSAYWMPQENGWIPSVSLGWGIN
HHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCC
STSFDVDDDVYDGEVSQSQSWMVGLEWNDLFVEGNAGGFAIGQAPFATRLKDGDTPHDGN
CCCCCCCCCCCCCCCCCCCCEEEEEEECEEEEECCCCCEEECCCCCHHHCCCCCCCCCCC
YVSELWYKFQATDNIVVTPGLFYLSRSASGLMDTDKTLNQFGGVFRTTFSF
HHHHHHEEEECCCCEEECCCCEEEECCCCCCCCCHHHHHHHCCHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]