Click here to switch to the map view.

The map label for this gene is 124023052

Identifier: 124023052

GI number: 124023052

Start: 1154836

End: 1155234

Strand: Direct

Name: 124023052

Synonym: P9303_13471

Alternate gene names: NA

Gene position: 1154836-1155234 (Clockwise)

Preceding gene: 124023050

Following gene: 124023055

Centisome position: 43.05

GC content: 48.62

Gene sequence:

>399_bases
ATGTCTGTTGCGCCAGTTTTCTTGCTCGCAGGTATTGGAGGTTTGCTTGTAGTTCTCAATAGCCGATTGGTTCGCATTGT
TGATCGTTCTCGTGAGCTTCAAGCTTTGACCCAGAGCCGGGATACACCTGTCTCATCAGAGCGTGAGAGCAAAACAGAGT
TACAAGCAATGAAGAGGCGCATGGCGTTGGTGATGAAAGCGATTGAACTTCTCACCGTCACGATTCTATTGGTGGCACTG
GTTGTAGCTGTTGTCTTTATCAGTGTGGTCACTCAACTTGATCTTGCCTTACTTGTGGTGCCTTTGTTCGTTATGGCGAT
GGTATGCCTAATGGCAGCAGCCCTTCTCTTTCAACGCGAGGTGCAGTTGGCCACTGCTCAGGTTAGACGATGGCTTTAA

Upstream 100 bases:

>100_bases
CTGCTCGATACGTTTGCTCATGATTTATGTCTTGCGGCTTGTTGACCTGGTTGCCCAAGTGGGTCATCAACCCGCTGAAA
ACCTGTCGAGGGCCATCCAG

Downstream 100 bases:

>100_bases
GCCTTTTCCTAATTATGCTTTCACCGAAAGCTTTGTTTTGTTGGCATTTGATTTGTTGCTGAGGTTGATTCTGGTTGGGC
GCAGGTCAAGTCTTGGACCC

Product: HAMP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSVAPVFLLAGIGGLLVVLNSRLVRIVDRSRELQALTQSRDTPVSSERESKTELQAMKRRMALVMKAIELLTVTILLVAL
VVAVVFISVVTQLDLALLVVPLFVMAMVCLMAAALLFQREVQLATAQVRRWL

Sequences:

>Translated_132_residues
MSVAPVFLLAGIGGLLVVLNSRLVRIVDRSRELQALTQSRDTPVSSERESKTELQAMKRRMALVMKAIELLTVTILLVAL
VVAVVFISVVTQLDLALLVVPLFVMAMVCLMAAALLFQREVQLATAQVRRWL
>Mature_131_residues
SVAPVFLLAGIGGLLVVLNSRLVRIVDRSRELQALTQSRDTPVSSERESKTELQAMKRRMALVMKAIELLTVTILLVALV
VAVVFISVVTQLDLALLVVPLFVMAMVCLMAAALLFQREVQLATAQVRRWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14557; Mature: 14426

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAPVFLLAGIGGLLVVLNSRLVRIVDRSRELQALTQSRDTPVSSERESKTELQAMKRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
MALVMKAIELLTVTILLVALVVAVVFISVVTQLDLALLVVPLFVMAMVCLMAAALLFQRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLATAQVRRWL
HHHHHHHHHHCC
>Mature Secondary Structure 
SVAPVFLLAGIGGLLVVLNSRLVRIVDRSRELQALTQSRDTPVSSERESKTELQAMKRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
MALVMKAIELLTVTILLVALVVAVVFISVVTQLDLALLVVPLFVMAMVCLMAAALLFQRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLATAQVRRWL
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA