| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023026
Identifier: 124023026
GI number: 124023026
Start: 1128520
End: 1129587
Strand: Direct
Name: 124023026
Synonym: P9303_13211
Alternate gene names: NA
Gene position: 1128520-1129587 (Clockwise)
Preceding gene: 124023021
Following gene: 124023034
Centisome position: 42.07
GC content: 50.75
Gene sequence:
>1068_bases ATGGACGGCAGCGTAAGCGGCGGCGGGCTGATCAGTGCCATCGAGCCTTTGTTGGTTCGTTCCGGTAGCGTCATCTTTGC TTTTGAGTTGGTTGTCATGGGGAAACGCCACCTCGCTCTAATGCTTTTCAGCGCTGGGGTTTTAAGCCTCATGGGTAGCT TGGCTTTGAAGTCACTCAGTACCACCAATGTTTTTGTGGCGGAACGCCAATCCGCATCAAAAAGTCCGATTCTGCCAAGC GATGCCGATCGGCCACGTATGGCTGATGGGCGTCATTACCCCATCGTTCCAGATGATCCGATCAAGCTTGCGGATCTTCT TCAAGAAGTAGAAGAAGCGCTGCTTCAACCATCAACACCTGAAGAAGATCTACCAAGCCTTGGCCATCAACAACAGCTCA TCTACCGGGTGTTGTCTAAGGATCTACCCACTTCTAATAAGGTGCTGGCTCACTTGCCGAGCCGTTGGCGTCATGTGGCT GAACGCCATTTAGCCGCAAGGCGTGAGTTTCTTGCGATGCACAGGAGATCCTTTACTCCTCGCTTAATGCCGGCCTGGAG AATCATTCCACCCGAGCCTGCAGAGAAGTTATTGAGCTATTACCGCAAAGCAGAACGTTCAACGGGTATCGATTGGGAAG TTTTAGCGGCGGTGAACCTTGTTGAAACAGGAATGGGCCGCATCGATGGTGTCTCTGTAGCTAATGCGCAAGGACCGATG CAGTTCTTGCCAACAACTTGGCAAGAGAATGGTATTGGAGAAGGTGACATCCGTGACCCCCATGACGCGATTCAGGCAGC CGCTCGCTATCTAGTACGCCGCGGCGGGCTGCAAGATATCCGTAAAGGGTTGTGGGGATATAACAATAGCGACCATTACG GAAGGGCCGTGCTCGAATACACAGCCTTATTGAAGGAAGATCCGCGCGCATTCACTGGACTTTATCATTGGGAAATTCAC TTTGACATTGATGCTGGGGATTTATGGCTGCCTGTTGGTTATAATCAAAACAAGCCAATTCCTGTGTCTAGCTATTTAAG GAAGTTTCCAGCAAGTAGCCCAAGATAA
Upstream 100 bases:
>100_bases TAGCTCCGCATAGCGGGCTACGTCCTCGCTGGACCAGCCAAGTTCTTTGAGCTCATCAGCTCGGTGAGTGGATTCCTTGG CCACGCGAGGGTTTCATGTA
Downstream 100 bases:
>100_bases ACGCTTTGATCAATTTAGAATGGTAAGGAGGATGATCAATTGCTAACACACTATGAATTAGGCCATAAATAGTCAATAGC TTTTAATCCCCGCAAGTGGA
Product: transglycosylase SLT domain-containing protein
Products: NA
Alternate protein names: NLP/P60 Protein; Transglycosylase SLT Domain-Containing Protein; Peptidase; Membrane-Bound Lytic Murein Transglycosylase B-Like Protein; Transglycosylase Family Protein
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MDGSVSGGGLISAIEPLLVRSGSVIFAFELVVMGKRHLALMLFSAGVLSLMGSLALKSLSTTNVFVAERQSASKSPILPS DADRPRMADGRHYPIVPDDPIKLADLLQEVEEALLQPSTPEEDLPSLGHQQQLIYRVLSKDLPTSNKVLAHLPSRWRHVA ERHLAARREFLAMHRRSFTPRLMPAWRIIPPEPAEKLLSYYRKAERSTGIDWEVLAAVNLVETGMGRIDGVSVANAQGPM QFLPTTWQENGIGEGDIRDPHDAIQAAARYLVRRGGLQDIRKGLWGYNNSDHYGRAVLEYTALLKEDPRAFTGLYHWEIH FDIDAGDLWLPVGYNQNKPIPVSSYLRKFPASSPR
Sequences:
>Translated_355_residues MDGSVSGGGLISAIEPLLVRSGSVIFAFELVVMGKRHLALMLFSAGVLSLMGSLALKSLSTTNVFVAERQSASKSPILPS DADRPRMADGRHYPIVPDDPIKLADLLQEVEEALLQPSTPEEDLPSLGHQQQLIYRVLSKDLPTSNKVLAHLPSRWRHVA ERHLAARREFLAMHRRSFTPRLMPAWRIIPPEPAEKLLSYYRKAERSTGIDWEVLAAVNLVETGMGRIDGVSVANAQGPM QFLPTTWQENGIGEGDIRDPHDAIQAAARYLVRRGGLQDIRKGLWGYNNSDHYGRAVLEYTALLKEDPRAFTGLYHWEIH FDIDAGDLWLPVGYNQNKPIPVSSYLRKFPASSPR >Mature_355_residues MDGSVSGGGLISAIEPLLVRSGSVIFAFELVVMGKRHLALMLFSAGVLSLMGSLALKSLSTTNVFVAERQSASKSPILPS DADRPRMADGRHYPIVPDDPIKLADLLQEVEEALLQPSTPEEDLPSLGHQQQLIYRVLSKDLPTSNKVLAHLPSRWRHVA ERHLAARREFLAMHRRSFTPRLMPAWRIIPPEPAEKLLSYYRKAERSTGIDWEVLAAVNLVETGMGRIDGVSVANAQGPM QFLPTTWQENGIGEGDIRDPHDAIQAAARYLVRRGGLQDIRKGLWGYNNSDHYGRAVLEYTALLKEDPRAFTGLYHWEIH FDIDAGDLWLPVGYNQNKPIPVSSYLRKFPASSPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39555; Mature: 39555
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGSVSGGGLISAIEPLLVRSGSVIFAFELVVMGKRHLALMLFSAGVLSLMGSLALKSLS CCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC TTNVFVAERQSASKSPILPSDADRPRMADGRHYPIVPDDPIKLADLLQEVEEALLQPSTP CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC EEDLPSLGHQQQLIYRVLSKDLPTSNKVLAHLPSRWRHVAERHLAARREFLAMHRRSFTP HHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC RLMPAWRIIPPEPAEKLLSYYRKAERSTGIDWEVLAAVNLVETGMGRIDGVSVANAQGPM CCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCH QFLPTTWQENGIGEGDIRDPHDAIQAAARYLVRRGGLQDIRKGLWGYNNSDHYGRAVLEY HHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHH TALLKEDPRAFTGLYHWEIHFDIDAGDLWLPVGYNQNKPIPVSSYLRKFPASSPR HHHHHCCCHHHHEEEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MDGSVSGGGLISAIEPLLVRSGSVIFAFELVVMGKRHLALMLFSAGVLSLMGSLALKSLS CCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC TTNVFVAERQSASKSPILPSDADRPRMADGRHYPIVPDDPIKLADLLQEVEEALLQPSTP CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC EEDLPSLGHQQQLIYRVLSKDLPTSNKVLAHLPSRWRHVAERHLAARREFLAMHRRSFTP HHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC RLMPAWRIIPPEPAEKLLSYYRKAERSTGIDWEVLAAVNLVETGMGRIDGVSVANAQGPM CCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCH QFLPTTWQENGIGEGDIRDPHDAIQAAARYLVRRGGLQDIRKGLWGYNNSDHYGRAVLEY HHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHH TALLKEDPRAFTGLYHWEIHFDIDAGDLWLPVGYNQNKPIPVSSYLRKFPASSPR HHHHHCCCHHHHEEEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA