| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022982
Identifier: 124022982
GI number: 124022982
Start: 1097629
End: 1098789
Strand: Reverse
Name: 124022982
Synonym: P9303_12771
Alternate gene names: NA
Gene position: 1098789-1097629 (Counterclockwise)
Preceding gene: 124022983
Following gene: 124022981
Centisome position: 40.96
GC content: 52.63
Gene sequence:
>1161_bases ATGGGCAAGCTCAGCAACACCGAACCCTGGCTAAAAACCTTCCGCAATCTCGTCCGCAAGACGACTGCTGAGGATTGGTG GATTGTGAAATCTGGCAATCGCATACGGCTTCAGGTTCCTGGTGTTGGCAGCAAAGTGTTGCCCTACGACTGGTCGGAAG AAGGTGCAGCCCATGCCTTGCCCCGCATTCAGCAGATCTTTAAGCGTTGGGCTGATGGAAACATCACACTTGCAGAGGCA GCGCAAACTGCTGATACCAGCAGTTCCAAGCAGCAACTGAACTTCGACGAGCTGATCGAGAGCTATAGAAAGTTCGTCCC CAACGCTGGCGATAAAACCTGGAAGAAGAATTATCTGCCCGTACTGCGCAATTGCCGAGACAAGTTCAAAGGAACCCCAC CACGTGATGGCGAAATACTCTGCATGGGATGCCTTGAGCAATGGGAGCAAGGCTCCAGGTCCCGTCAGATCAGCCGTCAA AAGCTTTATGGCTTTCTGACTTGGGCGGTGCAACGTGGTCACCTAAAAACGATCTACTTGCCTCCTACGTCCCTGCCAGA AGTGCGTAAGGCCAAGCGCGTTGGCTATGCCATTTCAGATGTAGAGATCCTCAGGTTGTTGGAAGGAATGCCTGATCCAC GTTGGCAATTTGCTGTTCAGCTCTGCAGCGTCTATGGCCTCAGGCCAGAAGAATTGCGATGGCTACGGATCAAAAACGGG GCAAAGGGTTCTGAACTGTGGACCATCTATCAAAAGTCGATGGGCGGCAGGAAAGGAGATAAGACAGAACCGCGTCGCTT GCTACCGCTACTCGTTCGTGATCTTGACGGCTCTTCCATTGATTGGAAGTTGCAAGCCCGGCTTCAAGTTGGCGAAAAGT TACCCCCACTGCAGAGCGATGGCGATGGAGCACAGGCATTAAGGAACTACCTACGTCGGCGTGAGGTTTGGAGGAGCTTG AAAACTGAGGCGTTGAACACAGGTGAACAGCTCACGACGTATTCCTTTAGGCATCGCTATGCCAAGGCTTCACATGCAGC CGGTTTGCCTGTGGCCAATATCGCTGAGGCCATGGGGCACACGATTGAAGTGCATCTCGGTAGTTACGCCAGGTTCAAAC CAGATGCAACAGCAGACCTTTATGCGCAGGTGAACGCTTAA
Upstream 100 bases:
>100_bases AGCATTTCTGTGTCATCAGGTGTCATCTGATGTTGCCTGGCGCTTGACTCTGACAACAGGCTGACCACAGAATGGGTATA GCAACCGGTCCCGCCCTCTA
Downstream 100 bases:
>100_bases TGGAAGAACTACAGCCAACCGACGAGCAACTTGCTCAAAGCATGCCTCTCACGCTCCATTCACGTTGGGGAAGGCAAGGT TTCGGTTCCATGGGGGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MGKLSNTEPWLKTFRNLVRKTTAEDWWIVKSGNRIRLQVPGVGSKVLPYDWSEEGAAHALPRIQQIFKRWADGNITLAEA AQTADTSSSKQQLNFDELIESYRKFVPNAGDKTWKKNYLPVLRNCRDKFKGTPPRDGEILCMGCLEQWEQGSRSRQISRQ KLYGFLTWAVQRGHLKTIYLPPTSLPEVRKAKRVGYAISDVEILRLLEGMPDPRWQFAVQLCSVYGLRPEELRWLRIKNG AKGSELWTIYQKSMGGRKGDKTEPRRLLPLLVRDLDGSSIDWKLQARLQVGEKLPPLQSDGDGAQALRNYLRRREVWRSL KTEALNTGEQLTTYSFRHRYAKASHAAGLPVANIAEAMGHTIEVHLGSYARFKPDATADLYAQVNA
Sequences:
>Translated_386_residues MGKLSNTEPWLKTFRNLVRKTTAEDWWIVKSGNRIRLQVPGVGSKVLPYDWSEEGAAHALPRIQQIFKRWADGNITLAEA AQTADTSSSKQQLNFDELIESYRKFVPNAGDKTWKKNYLPVLRNCRDKFKGTPPRDGEILCMGCLEQWEQGSRSRQISRQ KLYGFLTWAVQRGHLKTIYLPPTSLPEVRKAKRVGYAISDVEILRLLEGMPDPRWQFAVQLCSVYGLRPEELRWLRIKNG AKGSELWTIYQKSMGGRKGDKTEPRRLLPLLVRDLDGSSIDWKLQARLQVGEKLPPLQSDGDGAQALRNYLRRREVWRSL KTEALNTGEQLTTYSFRHRYAKASHAAGLPVANIAEAMGHTIEVHLGSYARFKPDATADLYAQVNA >Mature_385_residues GKLSNTEPWLKTFRNLVRKTTAEDWWIVKSGNRIRLQVPGVGSKVLPYDWSEEGAAHALPRIQQIFKRWADGNITLAEAA QTADTSSSKQQLNFDELIESYRKFVPNAGDKTWKKNYLPVLRNCRDKFKGTPPRDGEILCMGCLEQWEQGSRSRQISRQK LYGFLTWAVQRGHLKTIYLPPTSLPEVRKAKRVGYAISDVEILRLLEGMPDPRWQFAVQLCSVYGLRPEELRWLRIKNGA KGSELWTIYQKSMGGRKGDKTEPRRLLPLLVRDLDGSSIDWKLQARLQVGEKLPPLQSDGDGAQALRNYLRRREVWRSLK TEALNTGEQLTTYSFRHRYAKASHAAGLPVANIAEAMGHTIEVHLGSYARFKPDATADLYAQVNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44020; Mature: 43889
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLSNTEPWLKTFRNLVRKTTAEDWWIVKSGNRIRLQVPGVGSKVLPYDWSEEGAAHAL CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHH PRIQQIFKRWADGNITLAEAAQTADTSSSKQQLNFDELIESYRKFVPNAGDKTWKKNYLP HHHHHHHHHHCCCCEEEHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCHH VLRNCRDKFKGTPPRDGEILCMGCLEQWEQGSRSRQISRQKLYGFLTWAVQRGHLKTIYL HHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE PPTSLPEVRKAKRVGYAISDVEILRLLEGMPDPRWQFAVQLCSVYGLRPEELRWLRIKNG CCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHEEEEEECCC AKGSELWTIYQKSMGGRKGDKTEPRRLLPLLVRDLDGSSIDWKLQARLQVGEKLPPLQSD CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCC GDGAQALRNYLRRREVWRSLKTEALNTGEQLTTYSFRHRYAKASHAAGLPVANIAEAMGH CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC TIEVHLGSYARFKPDATADLYAQVNA EEEEEECCCEECCCCCCEEHEEEECC >Mature Secondary Structure GKLSNTEPWLKTFRNLVRKTTAEDWWIVKSGNRIRLQVPGVGSKVLPYDWSEEGAAHAL CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHH PRIQQIFKRWADGNITLAEAAQTADTSSSKQQLNFDELIESYRKFVPNAGDKTWKKNYLP HHHHHHHHHHCCCCEEEHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCHH VLRNCRDKFKGTPPRDGEILCMGCLEQWEQGSRSRQISRQKLYGFLTWAVQRGHLKTIYL HHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE PPTSLPEVRKAKRVGYAISDVEILRLLEGMPDPRWQFAVQLCSVYGLRPEELRWLRIKNG CCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHEEEEEECCC AKGSELWTIYQKSMGGRKGDKTEPRRLLPLLVRDLDGSSIDWKLQARLQVGEKLPPLQSD CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCC GDGAQALRNYLRRREVWRSLKTEALNTGEQLTTYSFRHRYAKASHAAGLPVANIAEAMGH CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC TIEVHLGSYARFKPDATADLYAQVNA EEEEEECCCEECCCCCCEEHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA