| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022954
Identifier: 124022954
GI number: 124022954
Start: 1079044
End: 1079649
Strand: Reverse
Name: 124022954
Synonym: P9303_12481
Alternate gene names: NA
Gene position: 1079649-1079044 (Counterclockwise)
Preceding gene: 124022956
Following gene: 124022953
Centisome position: 40.25
GC content: 42.08
Gene sequence:
>606_bases ATGAAAAACCGAAAGACTTCCCCAATTGCCTTGACTAGTTTATCCCTCGCCATGATCCTTAGTGGATGCTTAGGGAGCAA TGAGCCTCAGAAATCGGCTAGCGATCAGAACGTTCAAGAGAGAGTGGAGATAGAAAAGGATCAACCACAGGTGAAACAAG AAAGCACCTCAGTAACGAGACAAGCTCGTCAGAGAATTAAAAATGCACTAGCTGTTGAGCCGCATGAGCTTGATGGTGTT GAGGTTGCGCTAATGAGAGTCAAGCGCTCAAGTGGAAACACATTAAATATCTATTGGACATATACCAATAACTCTTCAGA GGAGAAGAAGCTTACCGAGGGATGTTATGGTTGGCTCTGTAAATATAGGGCAGCTTCAGATGCTTATATCATCGACAATA TTAATCAGAAAAAGCATCTTGTTGTAAAGGCTGATGGCAAGCCAATAACAAGTAATAAGTCAATGTTAGGTAGGGAAAAT ACTTTAGAGCCTGGTGCCACTATTAATGTTTGGGCAAAGTTCCCTGCACCTCCAAACGATATTGAAACGATATCTTTATA CCTTCCTGGCATCCCTCCAATCGAGGATGTCCAAATCACAGAATAA
Upstream 100 bases:
>100_bases GACTTGCCTATTTTTATTGATTGGCTTATAAGGGTGTGATGGATAGAAATGAAATGGCCAATTAATCCATTGTTCTAATA ACAAATCGAAATCTAAACTC
Downstream 100 bases:
>100_bases CTCAATGAATAAAACCAACCTTCAACATACAAATAACATAAAATGGGCATTCAATACTCTTCTTCTAGTCTCTTTTCTTC TTCCGCATTATCTCAGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKNRKTSPIALTSLSLAMILSGCLGSNEPQKSASDQNVQERVEIEKDQPQVKQESTSVTRQARQRIKNALAVEPHELDGV EVALMRVKRSSGNTLNIYWTYTNNSSEEKKLTEGCYGWLCKYRAASDAYIIDNINQKKHLVVKADGKPITSNKSMLGREN TLEPGATINVWAKFPAPPNDIETISLYLPGIPPIEDVQITE
Sequences:
>Translated_201_residues MKNRKTSPIALTSLSLAMILSGCLGSNEPQKSASDQNVQERVEIEKDQPQVKQESTSVTRQARQRIKNALAVEPHELDGV EVALMRVKRSSGNTLNIYWTYTNNSSEEKKLTEGCYGWLCKYRAASDAYIIDNINQKKHLVVKADGKPITSNKSMLGREN TLEPGATINVWAKFPAPPNDIETISLYLPGIPPIEDVQITE >Mature_201_residues MKNRKTSPIALTSLSLAMILSGCLGSNEPQKSASDQNVQERVEIEKDQPQVKQESTSVTRQARQRIKNALAVEPHELDGV EVALMRVKRSSGNTLNIYWTYTNNSSEEKKLTEGCYGWLCKYRAASDAYIIDNINQKKHLVVKADGKPITSNKSMLGREN TLEPGATINVWAKFPAPPNDIETISLYLPGIPPIEDVQITE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22357; Mature: 22357
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRKTSPIALTSLSLAMILSGCLGSNEPQKSASDQNVQERVEIEKDQPQVKQESTSVTR CCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH QARQRIKNALAVEPHELDGVEVALMRVKRSSGNTLNIYWTYTNNSSEEKKLTEGCYGWLC HHHHHHHHHHCCCCCCCCCCEEEEEEHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH KYRAASDAYIIDNINQKKHLVVKADGKPITSNKSMLGRENTLEPGATINVWAKFPAPPND HHCCCCCEEEEECCCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCCC IETISLYLPGIPPIEDVQITE CEEEEEEECCCCCCCCCEECC >Mature Secondary Structure MKNRKTSPIALTSLSLAMILSGCLGSNEPQKSASDQNVQERVEIEKDQPQVKQESTSVTR CCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH QARQRIKNALAVEPHELDGVEVALMRVKRSSGNTLNIYWTYTNNSSEEKKLTEGCYGWLC HHHHHHHHHHCCCCCCCCCCEEEEEEHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH KYRAASDAYIIDNINQKKHLVVKADGKPITSNKSMLGRENTLEPGATINVWAKFPAPPND HHCCCCCEEEEECCCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCCC IETISLYLPGIPPIEDVQITE CEEEEEEECCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA