| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022911
Identifier: 124022911
GI number: 124022911
Start: 1050014
End: 1051939
Strand: Reverse
Name: 124022911
Synonym: P9303_12041
Alternate gene names: NA
Gene position: 1051939-1050014 (Counterclockwise)
Preceding gene: 124022912
Following gene: 124022909
Centisome position: 39.21
GC content: 48.08
Gene sequence:
>1926_bases ATGGCCATCCGGTACAGCTCTCTAGCCGATCCTCTGATAGCCTACATAGACAAAGATCAAGAAAATACATCGGGCAGAGC ATCAAGCTTACTGACCCCAATCAACTACAACGCAGATCTATTTGCTAACGAGGCAAAGTTTTTCACTGGTAACTATGGAT TTGACGGATATATTGGTGTACCGGGCTTACTCGGGCCAGGGGGCCAGCAGGCAGCTGCGCATCACAATGTTGCCTGGGAA AGTGTTGATCCAGATCTGAGTCCAACGCTCCGCGCGCTAACAAGTGCAGCGAGCGTTGTTGGATCTAAAGCTGTTTATGG CATGAATCTTTTGTTGCAAGACACCATGCCATTGGTGTTCAGTTATCCAGTCTTACCAACAACCTTAGATGGAAATGGAA GCGATTTTGAGATCACCCTGAACGATGGTTCGATCGTATCGCCTGCCCTTGCAGGATTCTTGCCAAACCTCGAATACAAT GAACGCCAAACGATAGTGGTGGCAGGTGATTTCGGCAATCGCCTCAACCCCGAAAGTGAAGGAGCCCGCTATCCGGTATC GGTTCGAATCGTCAATGACGGCACACCCCTGCAGATGCTCTCAGCAAAAGGGCCTGTCTTTGCTACAGAACTGTCCGTCG ATAGCAGCAACTCCTATGTTCAAGGGGATGGCCCGAAGCTTGTTGCGGCCAAACTCAATACCTTCAGTCCGCTTGGAGAA GGCGGACCTATTGGCGTTGGCGCCACTTCAGCTAGCAACAGCGGGAGCGATCTTTATGGGGATCAAGCCCAATATCGCCT ACGCCTTTATACCAGTGCAGGATTCTCACCAGATGGCATTGCAAGCCTGCAACCCAGCGAGTTCAATAAATACTTTATTC TTGAAGCGAAAGGCGATAACGGCGAAAAAATTTCACTTACTAAATCGAATCAGGATTATCTTATTGGCAAATATGGTTCC ATCAAAGTTGTAGGAATAGCAGATTTAGCACCAGCAGGAACAATAGAAAATGCCGCTTATGTGGAAGATCATGATAATTA CTACGACATCATCCTAGAAGGTGATCTCAGTGCAATTACGAGACTAAAAAGTGTTCGTATGCCATCAAGGGGTAATTACC AGGCCGTTTATAACCCTGGTGGACCCGGTAATAATCCGGACGCACAGGCTGCAGCACCAGGCCCGTTTACGATGCCGAGC GTCGATCACACCATTGCCATCATCAACGACCTTAATGGTGCGATGACTGCCACCTATGTCGAAATCGAAGGAGACGTACT GACAAATCCATTGAGTAACTTGCCGGTTGGAAAGCTGCTAGGAGTAGCAGTGGAAGACACGATCAGCGGCCAGCAAATTT ACGCGTACGAAGATCCCTATGGACGTCGTTTCTACACAAGTTTCGAAGCCTCCAAAGACGTAGCCTCGGTACTTCCTAGC AACCTCCTGAAGCCGAAGCCGATTGACCTGATCGACACAACAGGTTTTGCGCCCGACTCCAGCGTCATTATTTCCGGGTC ATTTAGTCGCTCAGCATCTCACAGCTCAACATTGCAGTTTTATGAGGTAGCAGGACCCGATGGTGGTGTAGTTGACCCTG TTACTGGCAGAACGCTGATGCCCAATGAAAGCGGCTACAACTATGTGGCGAGGAGCAATCTGCTTACCAGCCAAAATAGT TCATTGAAAATCGAAAATAAGGAAATTAATAAATTTCAGTTCAATGCCGAGGCCGGAAAGATTTATGCACCATTGCTGAT CAACGAAGTAACTGGTGAACAGTATTTTGCCTTCACTGGCGCTAACTCTGACAAGTCCGCGCATTTCACTGCTCTTGGTC CCAATGGCTTTGGTATAGAGGATCTATTTGGTGGTGGAGATAAGGATTTTGCCGACATGATCGTGCAATATACGATCACA GTCTGA
Upstream 100 bases:
>100_bases AAGCAACCCAGTACAGCAGGCTAAAAGTAGATGGCATCAGCCCTTGCTAAAATATATTTTTAAAGGTCTAAACTATGTTC ACTAGCTAAAATCATTAATT
Downstream 100 bases:
>100_bases ATCTCAACAGTTAAGTCAAGCTTTCTGTAGTTCTTCCATTAAGCGTTCACTCATACATAAAGATCTGCTGCACTGCCGTC CTCTTGAGCAGCGACTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 641; Mature: 640
Protein sequence:
>641_residues MAIRYSSLADPLIAYIDKDQENTSGRASSLLTPINYNADLFANEAKFFTGNYGFDGYIGVPGLLGPGGQQAAAHHNVAWE SVDPDLSPTLRALTSAASVVGSKAVYGMNLLLQDTMPLVFSYPVLPTTLDGNGSDFEITLNDGSIVSPALAGFLPNLEYN ERQTIVVAGDFGNRLNPESEGARYPVSVRIVNDGTPLQMLSAKGPVFATELSVDSSNSYVQGDGPKLVAAKLNTFSPLGE GGPIGVGATSASNSGSDLYGDQAQYRLRLYTSAGFSPDGIASLQPSEFNKYFILEAKGDNGEKISLTKSNQDYLIGKYGS IKVVGIADLAPAGTIENAAYVEDHDNYYDIILEGDLSAITRLKSVRMPSRGNYQAVYNPGGPGNNPDAQAAAPGPFTMPS VDHTIAIINDLNGAMTATYVEIEGDVLTNPLSNLPVGKLLGVAVEDTISGQQIYAYEDPYGRRFYTSFEASKDVASVLPS NLLKPKPIDLIDTTGFAPDSSVIISGSFSRSASHSSTLQFYEVAGPDGGVVDPVTGRTLMPNESGYNYVARSNLLTSQNS SLKIENKEINKFQFNAEAGKIYAPLLINEVTGEQYFAFTGANSDKSAHFTALGPNGFGIEDLFGGGDKDFADMIVQYTIT V
Sequences:
>Translated_641_residues MAIRYSSLADPLIAYIDKDQENTSGRASSLLTPINYNADLFANEAKFFTGNYGFDGYIGVPGLLGPGGQQAAAHHNVAWE SVDPDLSPTLRALTSAASVVGSKAVYGMNLLLQDTMPLVFSYPVLPTTLDGNGSDFEITLNDGSIVSPALAGFLPNLEYN ERQTIVVAGDFGNRLNPESEGARYPVSVRIVNDGTPLQMLSAKGPVFATELSVDSSNSYVQGDGPKLVAAKLNTFSPLGE GGPIGVGATSASNSGSDLYGDQAQYRLRLYTSAGFSPDGIASLQPSEFNKYFILEAKGDNGEKISLTKSNQDYLIGKYGS IKVVGIADLAPAGTIENAAYVEDHDNYYDIILEGDLSAITRLKSVRMPSRGNYQAVYNPGGPGNNPDAQAAAPGPFTMPS VDHTIAIINDLNGAMTATYVEIEGDVLTNPLSNLPVGKLLGVAVEDTISGQQIYAYEDPYGRRFYTSFEASKDVASVLPS NLLKPKPIDLIDTTGFAPDSSVIISGSFSRSASHSSTLQFYEVAGPDGGVVDPVTGRTLMPNESGYNYVARSNLLTSQNS SLKIENKEINKFQFNAEAGKIYAPLLINEVTGEQYFAFTGANSDKSAHFTALGPNGFGIEDLFGGGDKDFADMIVQYTIT V >Mature_640_residues AIRYSSLADPLIAYIDKDQENTSGRASSLLTPINYNADLFANEAKFFTGNYGFDGYIGVPGLLGPGGQQAAAHHNVAWES VDPDLSPTLRALTSAASVVGSKAVYGMNLLLQDTMPLVFSYPVLPTTLDGNGSDFEITLNDGSIVSPALAGFLPNLEYNE RQTIVVAGDFGNRLNPESEGARYPVSVRIVNDGTPLQMLSAKGPVFATELSVDSSNSYVQGDGPKLVAAKLNTFSPLGEG GPIGVGATSASNSGSDLYGDQAQYRLRLYTSAGFSPDGIASLQPSEFNKYFILEAKGDNGEKISLTKSNQDYLIGKYGSI KVVGIADLAPAGTIENAAYVEDHDNYYDIILEGDLSAITRLKSVRMPSRGNYQAVYNPGGPGNNPDAQAAAPGPFTMPSV DHTIAIINDLNGAMTATYVEIEGDVLTNPLSNLPVGKLLGVAVEDTISGQQIYAYEDPYGRRFYTSFEASKDVASVLPSN LLKPKPIDLIDTTGFAPDSSVIISGSFSRSASHSSTLQFYEVAGPDGGVVDPVTGRTLMPNESGYNYVARSNLLTSQNSS LKIENKEINKFQFNAEAGKIYAPLLINEVTGEQYFAFTGANSDKSAHFTALGPNGFGIEDLFGGGDKDFADMIVQYTITV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68091; Mature: 67960
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRYSSLADPLIAYIDKDQENTSGRASSLLTPINYNADLFANEAKFFTGNYGFDGYIGV CEEECCHHCCCCEEEECCCCCCCCCCHHHEECCCCCCCCEEECCCEEEECCCCCCCEECC PGLLGPGGQQAAAHHNVAWESVDPDLSPTLRALTSAASVVGSKAVYGMNLLLQDTMPLVF CCCCCCCCCCCHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCHHEEEEEEEECCCCEEE SYPVLPTTLDGNGSDFEITLNDGSIVSPALAGFLPNLEYNERQTIVVAGDFGNRLNPESE ECCCCEEEECCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC GARYPVSVRIVNDGTPLQMLSAKGPVFATELSVDSSNSYVQGDGPKLVAAKLNTFSPLGE CCCCCEEEEEECCCCCEEEEECCCCEEEEEEEECCCCCEEECCCCEEEEEECCCCCCCCC GGPIGVGATSASNSGSDLYGDQAQYRLRLYTSAGFSPDGIASLQPSEFNKYFILEAKGDN CCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCC GEKISLTKSNQDYLIGKYGSIKVVGIADLAPAGTIENAAYVEDHDNYYDIILEGDLSAIT CCEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCEEEEEEECCHHHHH RLKSVRMPSRGNYQAVYNPGGPGNNPDAQAAAPGPFTMPSVDHTIAIINDLNGAMTATYV HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE EIEGDVLTNPLSNLPVGKLLGVAVEDTISGQQIYAYEDPYGRRFYTSFEASKDVASVLPS EEECCEECCCCCCCCHHHHEEEEEECCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHH NLLKPKPIDLIDTTGFAPDSSVIISGSFSRSASHSSTLQFYEVAGPDGGVVDPVTGRTLM HCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEECCCCCCEEC PNESGYNYVARSNLLTSQNSSLKIENKEINKFQFNAEAGKIYAPLLINEVTGEQYFAFTG CCCCCCCEEEECCEEECCCCCEEEECCCCCEEEEECCCCEEEEEEEEEECCCCEEEEEEC ANSDKSAHFTALGPNGFGIEDLFGGGDKDFADMIVQYTITV CCCCCCEEEEEECCCCCCHHHHCCCCCHHHHHEEEEEEEEC >Mature Secondary Structure AIRYSSLADPLIAYIDKDQENTSGRASSLLTPINYNADLFANEAKFFTGNYGFDGYIGV EEECCHHCCCCEEEECCCCCCCCCCHHHEECCCCCCCCEEECCCEEEECCCCCCCEECC PGLLGPGGQQAAAHHNVAWESVDPDLSPTLRALTSAASVVGSKAVYGMNLLLQDTMPLVF CCCCCCCCCCCHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCHHEEEEEEEECCCCEEE SYPVLPTTLDGNGSDFEITLNDGSIVSPALAGFLPNLEYNERQTIVVAGDFGNRLNPESE ECCCCEEEECCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC GARYPVSVRIVNDGTPLQMLSAKGPVFATELSVDSSNSYVQGDGPKLVAAKLNTFSPLGE CCCCCEEEEEECCCCCEEEEECCCCEEEEEEEECCCCCEEECCCCEEEEEECCCCCCCCC GGPIGVGATSASNSGSDLYGDQAQYRLRLYTSAGFSPDGIASLQPSEFNKYFILEAKGDN CCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCC GEKISLTKSNQDYLIGKYGSIKVVGIADLAPAGTIENAAYVEDHDNYYDIILEGDLSAIT CCEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCEEEEEEECCHHHHH RLKSVRMPSRGNYQAVYNPGGPGNNPDAQAAAPGPFTMPSVDHTIAIINDLNGAMTATYV HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE EIEGDVLTNPLSNLPVGKLLGVAVEDTISGQQIYAYEDPYGRRFYTSFEASKDVASVLPS EEECCEECCCCCCCCHHHHEEEEEECCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHH NLLKPKPIDLIDTTGFAPDSSVIISGSFSRSASHSSTLQFYEVAGPDGGVVDPVTGRTLM HCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEECCCCCCEEC PNESGYNYVARSNLLTSQNSSLKIENKEINKFQFNAEAGKIYAPLLINEVTGEQYFAFTG CCCCCCCEEEECCEEECCCCCEEEECCCCCEEEEECCCCEEEEEEEEEECCCCEEEEEEC ANSDKSAHFTALGPNGFGIEDLFGGGDKDFADMIVQYTITV CCCCCCEEEEEECCCCCCHHHHCCCCCHHHHHEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA