Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124022892

Identifier: 124022892

GI number: 124022892

Start: 1041392

End: 1042837

Strand: Direct

Name: 124022892

Synonym: P9303_11851

Alternate gene names: NA

Gene position: 1041392-1042837 (Clockwise)

Preceding gene: 124022890

Following gene: 124022893

Centisome position: 38.82

GC content: 50.35

Gene sequence:

>1446_bases
ATGTCTGCCTTTTCACAACGCATCATTGACCTCATGAAAACGAGCAAAAATGATGTTCTCGAGCTGGTGATCGGTAGCTT
CGAACTGAGTAAGATCAAGGCAGGGCAACCAGCGATCGGTAAGGACCAGGTTCTCTACAAGGTTGGGCGTTACGACGGCG
TTAACTGGATTCTCGAGGCTGGATATCCGGTGCAGGGACGAACATTCAGTGATGATGAAAAAATGTTTGATGATGTTGCC
TACGCCAACGGCCAAAAGGTTGACAACGCAGTGATTGTCAGGGTTGACGATTCAACTCCAGGAAATCCAGACAGCTATTA
CGTCTATAACGAGAACTGGGAGAGAGTGGCACCCGGCACCGTGACTAACGGTATGAAAACAGTGGTGATCGGCCCCGACA
AAAACCCTTACCTGACTGATGGGCACCACACGCTGAACACTTTTTCACAGATGAAGCGAGGAGGATTCGAAGATTTCAAG
ATCAATCTAGTTGTGGAAGCTAATTACTCAAATCTGAAAGACAAGAATAATAACGGCAGTTCCATGGATGAATTCTGGAT
AGAAATGGCCAACAGCGGCAACGCCTGGCTCAAGGTTCTCAAAGAAAACGAACCCGGATACCGTTATCTGAATGGTGTGG
AAGGAGACCAGGATGAATACATGGTGCACTCCGTGGACCTGGACAGGTTCAAGGGTCAGCTGCCAGAAGAAATGAAACCG
GAGGCCTTCAGGAATGACCCCTATCGAGCCATCATGAATTTCACAAGAGGAATCGCATGGGAGGCGCCTGAAGGAACAAA
AGCTGATGGATTACCCTTCCTTGAATTTTACTGGGCGGAAGAAATTCAGAATGCCATTGGCGATGGCAATAGCGCTCTTG
ATGTTCATACTGAGGCCTCTCCATACAACCTCTCTAATCTCGACAGTTATGTCTCGGCAGTGCAGGAGATCTCCAACTGG
ATCATCAATCTTGACCCGGATACCATCATCGGCACCAGTGTTTTTACAGCCAGGGAGATGGGCCAGAAAACTGAGATCGA
TGAAGGGAAATTAAACAGCCTGATCGATTCCGGCAAGACGCTCGAAGCCTCATCATCCGATGAAAAAGACGCCGTCGATG
TGCCCAGTTTCGGAAAACTCGGCTACGCCTGGGCGCAACGGAACGGAGGAAGCGAAGGCAACGACAGGCTCACGGGCCTT
CCCGGACCAGACCTCTTCGTACTGTCACCCGGAAACGATGTGATAAGTGATTTCCGCATCGGCGAGGATTCCATCAGCGT
TGCGGGAACTCCTGACCTGCGCTTCAGACAGACAGGAGAGGGACTGTTGATCAGTGCCGGAGACGATATCCACACCCTGC
TTCTGAATGTGCACAGGGATGCGTTTCTGGCTCATGAACCGGCCCATCTGCATATCATTCCAGCCCAGGACGACAACCTG
ATCTGA

Upstream 100 bases:

>100_bases
CAGGCTGTTCATTCTGACAAGACTGGTCAAAGGCGAGGCTGTTAAAAGTGATTAGGCCTGCAAAGCAGCCATGGCTATTA
TTTCTAATAAATCATAAAAA

Downstream 100 bases:

>100_bases
TCTTTACTGTCCTGCTGAAGGCACAGATCAGATCATTCGCTGCAGTTCCGAGTTGATGATTCAGGGCCCGAAGCACACGT
CGTCATGATGTCGTCGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MSAFSQRIIDLMKTSKNDVLELVIGSFELSKIKAGQPAIGKDQVLYKVGRYDGVNWILEAGYPVQGRTFSDDEKMFDDVA
YANGQKVDNAVIVRVDDSTPGNPDSYYVYNENWERVAPGTVTNGMKTVVIGPDKNPYLTDGHHTLNTFSQMKRGGFEDFK
INLVVEANYSNLKDKNNNGSSMDEFWIEMANSGNAWLKVLKENEPGYRYLNGVEGDQDEYMVHSVDLDRFKGQLPEEMKP
EAFRNDPYRAIMNFTRGIAWEAPEGTKADGLPFLEFYWAEEIQNAIGDGNSALDVHTEASPYNLSNLDSYVSAVQEISNW
IINLDPDTIIGTSVFTAREMGQKTEIDEGKLNSLIDSGKTLEASSSDEKDAVDVPSFGKLGYAWAQRNGGSEGNDRLTGL
PGPDLFVLSPGNDVISDFRIGEDSISVAGTPDLRFRQTGEGLLISAGDDIHTLLLNVHRDAFLAHEPAHLHIIPAQDDNL
I

Sequences:

>Translated_481_residues
MSAFSQRIIDLMKTSKNDVLELVIGSFELSKIKAGQPAIGKDQVLYKVGRYDGVNWILEAGYPVQGRTFSDDEKMFDDVA
YANGQKVDNAVIVRVDDSTPGNPDSYYVYNENWERVAPGTVTNGMKTVVIGPDKNPYLTDGHHTLNTFSQMKRGGFEDFK
INLVVEANYSNLKDKNNNGSSMDEFWIEMANSGNAWLKVLKENEPGYRYLNGVEGDQDEYMVHSVDLDRFKGQLPEEMKP
EAFRNDPYRAIMNFTRGIAWEAPEGTKADGLPFLEFYWAEEIQNAIGDGNSALDVHTEASPYNLSNLDSYVSAVQEISNW
IINLDPDTIIGTSVFTAREMGQKTEIDEGKLNSLIDSGKTLEASSSDEKDAVDVPSFGKLGYAWAQRNGGSEGNDRLTGL
PGPDLFVLSPGNDVISDFRIGEDSISVAGTPDLRFRQTGEGLLISAGDDIHTLLLNVHRDAFLAHEPAHLHIIPAQDDNL
I
>Mature_480_residues
SAFSQRIIDLMKTSKNDVLELVIGSFELSKIKAGQPAIGKDQVLYKVGRYDGVNWILEAGYPVQGRTFSDDEKMFDDVAY
ANGQKVDNAVIVRVDDSTPGNPDSYYVYNENWERVAPGTVTNGMKTVVIGPDKNPYLTDGHHTLNTFSQMKRGGFEDFKI
NLVVEANYSNLKDKNNNGSSMDEFWIEMANSGNAWLKVLKENEPGYRYLNGVEGDQDEYMVHSVDLDRFKGQLPEEMKPE
AFRNDPYRAIMNFTRGIAWEAPEGTKADGLPFLEFYWAEEIQNAIGDGNSALDVHTEASPYNLSNLDSYVSAVQEISNWI
INLDPDTIIGTSVFTAREMGQKTEIDEGKLNSLIDSGKTLEASSSDEKDAVDVPSFGKLGYAWAQRNGGSEGNDRLTGLP
GPDLFVLSPGNDVISDFRIGEDSISVAGTPDLRFRQTGEGLLISAGDDIHTLLLNVHRDAFLAHEPAHLHIIPAQDDNLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53257; Mature: 53125

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFSQRIIDLMKTSKNDVLELVIGSFELSKIKAGQPAIGKDQVLYKVGRYDGVNWILEA
CCHHHHHHHHHHHCCCCCEEHHHHCCEEEEEECCCCCCCCCCHHEEEECCCCCCEEEEEC
GYPVQGRTFSDDEKMFDDVAYANGQKVDNAVIVRVDDSTPGNPDSYYVYNENWERVAPGT
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEECCCC
VTNGMKTVVIGPDKNPYLTDGHHTLNTFSQMKRGGFEDFKINLVVEANYSNLKDKNNNGS
CCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCC
SMDEFWIEMANSGNAWLKVLKENEPGYRYLNGVEGDQDEYMVHSVDLDRFKGQLPEEMKP
CHHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCCCCEEEEEECHHHHHCCCCHHCCC
EAFRNDPYRAIMNFTRGIAWEAPEGTKADGLPFLEFYWAEEIQNAIGDGNSALDVHTEAS
HHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
PYNLSNLDSYVSAVQEISNWIINLDPDTIIGTSVFTAREMGQKTEIDEGKLNSLIDSGKT
CCCHHHHHHHHHHHHHHHCCEEECCCCCEECCHHHHHHHCCCCCCCCCCHHHHHHHCCCE
LEASSSDEKDAVDVPSFGKLGYAWAQRNGGSEGNDRLTGLPGPDLFVLSPGNDVISDFRI
EECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHEEC
GEDSISVAGTPDLRFRQTGEGLLISAGDDIHTLLLNVHRDAFLAHEPAHLHIIPAQDDNL
CCCCEEECCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCCCC
I
C
>Mature Secondary Structure 
SAFSQRIIDLMKTSKNDVLELVIGSFELSKIKAGQPAIGKDQVLYKVGRYDGVNWILEA
CHHHHHHHHHHHCCCCCEEHHHHCCEEEEEECCCCCCCCCCHHEEEECCCCCCEEEEEC
GYPVQGRTFSDDEKMFDDVAYANGQKVDNAVIVRVDDSTPGNPDSYYVYNENWERVAPGT
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEECCCC
VTNGMKTVVIGPDKNPYLTDGHHTLNTFSQMKRGGFEDFKINLVVEANYSNLKDKNNNGS
CCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCC
SMDEFWIEMANSGNAWLKVLKENEPGYRYLNGVEGDQDEYMVHSVDLDRFKGQLPEEMKP
CHHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCCCCEEEEEECHHHHHCCCCHHCCC
EAFRNDPYRAIMNFTRGIAWEAPEGTKADGLPFLEFYWAEEIQNAIGDGNSALDVHTEAS
HHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
PYNLSNLDSYVSAVQEISNWIINLDPDTIIGTSVFTAREMGQKTEIDEGKLNSLIDSGKT
CCCHHHHHHHHHHHHHHHCCEEECCCCCEECCHHHHHHHCCCCCCCCCCHHHHHHHCCCE
LEASSSDEKDAVDVPSFGKLGYAWAQRNGGSEGNDRLTGLPGPDLFVLSPGNDVISDFRI
EECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHEEC
GEDSISVAGTPDLRFRQTGEGLLISAGDDIHTLLLNVHRDAFLAHEPAHLHIIPAQDDNL
CCCCEEECCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA