| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022867
Identifier: 124022867
GI number: 124022867
Start: 1025444
End: 1025803
Strand: Reverse
Name: 124022867
Synonym: P9303_11601
Alternate gene names: NA
Gene position: 1025803-1025444 (Counterclockwise)
Preceding gene: 124022868
Following gene: 124022865
Centisome position: 38.24
GC content: 44.44
Gene sequence:
>360_bases ATGGATCAAAATGTTTTAGGCGAACCTCTCGAGATTTGTAGTTGTGATCCGAACACGGGTTGGTATCGAGACGGAAAATG TAGAACTGATGGAAATGACCTTGGTCAGCATACGGTTTGCTGCGTGATCAGCGAGCAATTTCTGACCTATAGCAAAGCTC AAGGGAACGATCTATCAACGCCAATGCCTCAGTATGGCTTCTCAGGGCTGAAGCCAGGTGATCATTGGTGTGTATGTGCA TCTCGTTGGAAACAAGCCTATGATGATGGCATGGCCCCAAATATTCGATTAGAAGCAACGAATATCGAAGTTTTGGCAAT TGTAGATCTTCAGATACTCAAGCAATACAGTCATGCTTGA
Upstream 100 bases:
>100_bases AGAATGCTACTTATGTTTAACTCAAAGCAAATGCTAAGGCTCAGTTGCTATTGCCTTACAGCTTTAAACCTATAAGATTT AGCTAATCAGTCATTTGCCA
Downstream 100 bases:
>100_bases GCTGCATAGATCTTTGAGAATTGAGAGCACTGATAGGCATGATCGATATCTCGGATGCGCCAAGGAATCACTATTTAATA CTCTTCCAACAATACTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MDQNVLGEPLEICSCDPNTGWYRDGKCRTDGNDLGQHTVCCVISEQFLTYSKAQGNDLSTPMPQYGFSGLKPGDHWCVCA SRWKQAYDDGMAPNIRLEATNIEVLAIVDLQILKQYSHA
Sequences:
>Translated_119_residues MDQNVLGEPLEICSCDPNTGWYRDGKCRTDGNDLGQHTVCCVISEQFLTYSKAQGNDLSTPMPQYGFSGLKPGDHWCVCA SRWKQAYDDGMAPNIRLEATNIEVLAIVDLQILKQYSHA >Mature_119_residues MDQNVLGEPLEICSCDPNTGWYRDGKCRTDGNDLGQHTVCCVISEQFLTYSKAQGNDLSTPMPQYGFSGLKPGDHWCVCA SRWKQAYDDGMAPNIRLEATNIEVLAIVDLQILKQYSHA
Specific function: Unknown
COG id: COG3651
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13258; Mature: 13258
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQNVLGEPLEICSCDPNTGWYRDGKCRTDGNDLGQHTVCCVISEQFLTYSKAQGNDLST CCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCC PMPQYGFSGLKPGDHWCVCASRWKQAYDDGMAPNIRLEATNIEVLAIVDLQILKQYSHA CCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHHHHHHHCCC >Mature Secondary Structure MDQNVLGEPLEICSCDPNTGWYRDGKCRTDGNDLGQHTVCCVISEQFLTYSKAQGNDLST CCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCC PMPQYGFSGLKPGDHWCVCASRWKQAYDDGMAPNIRLEATNIEVLAIVDLQILKQYSHA CCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA