| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022855
Identifier: 124022855
GI number: 124022855
Start: 1019306
End: 1020016
Strand: Reverse
Name: 124022855
Synonym: P9303_11481
Alternate gene names: NA
Gene position: 1020016-1019306 (Counterclockwise)
Preceding gene: 124022856
Following gene: 124022853
Centisome position: 38.02
GC content: 51.9
Gene sequence:
>711_bases ATGGATCGCTGGGCACTCGTAAGCGGTCTCCGCGGAGATTTGGAGGTTTATAACCTCATCCAGCGAGACTTAAAGAAAAC CCGTGGGGTAGAGACCCTCTTTGTCTTGGGAGATCTGATTGGTCCTGATCGCAACTGCAACGCACTGTTGAACCGTCTGC AAAACCCTCATCGCAATGAATTAAAACCCCAATGCATCTATGGGTGGTGGGAAGAACAATTGCTTGCAGAGCGCGGGTTT CGTGGTGATCGAAATGCCGAAGCACTACGTCTCAACCAAGGAGAAGATGCTGTGCATGCACTTGTCAATGCTGTTGATTC TGCTCACTTGAACTGGCTGGCCTCTCTTCAATTCGGCTTCATTGAACTGGATTGTGGTCTCATCCATGGCAGCTCGGCGG ACGTTGGCGACAACCTGACGCCAGAGAGCTCACCGTTAGTGCTCCTTGATCGCCTCACACGACTCGATGTGAACAGACTG TTCACTGCACGCAGCACTCAGCAATTTCGTCTTGAGTTAACAGGTGGAGGTATCGACTCACAAGTCAAGGATTTGGAGGG TCAACAGCAACATCAACAGACGGTTCCCAAACGGAGCGTGATCGGCATCGGAGCTGGCCCTCATTACACCCTTTACGACC CAGGCAGCGATCAAATCGACTTCCTCACTGCCGGAAGTCAAACGCCATCCAAGCATCGCGGTTTTGCTTGA
Upstream 100 bases:
>100_bases TTGTTGAAGCGGGGCTACCTCCAGTGTTCGCCTGGCGCTTGAGCCATGGCTTCGAATATGCCGAACAAGCAGAAGACGCC AGCCACGTGTGTGAACGCTG
Downstream 100 bases:
>100_bases ACTAACCCTGCCCAACAGGACAAGTTAAAAGTTCAGTGAAAGACAGGAGCGCCTAAACCCTTGATGGCAATGGGGTTTAA CACTCTCTTACGATCCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MDRWALVSGLRGDLEVYNLIQRDLKKTRGVETLFVLGDLIGPDRNCNALLNRLQNPHRNELKPQCIYGWWEEQLLAERGF RGDRNAEALRLNQGEDAVHALVNAVDSAHLNWLASLQFGFIELDCGLIHGSSADVGDNLTPESSPLVLLDRLTRLDVNRL FTARSTQQFRLELTGGGIDSQVKDLEGQQQHQQTVPKRSVIGIGAGPHYTLYDPGSDQIDFLTAGSQTPSKHRGFA
Sequences:
>Translated_236_residues MDRWALVSGLRGDLEVYNLIQRDLKKTRGVETLFVLGDLIGPDRNCNALLNRLQNPHRNELKPQCIYGWWEEQLLAERGF RGDRNAEALRLNQGEDAVHALVNAVDSAHLNWLASLQFGFIELDCGLIHGSSADVGDNLTPESSPLVLLDRLTRLDVNRL FTARSTQQFRLELTGGGIDSQVKDLEGQQQHQQTVPKRSVIGIGAGPHYTLYDPGSDQIDFLTAGSQTPSKHRGFA >Mature_236_residues MDRWALVSGLRGDLEVYNLIQRDLKKTRGVETLFVLGDLIGPDRNCNALLNRLQNPHRNELKPQCIYGWWEEQLLAERGF RGDRNAEALRLNQGEDAVHALVNAVDSAHLNWLASLQFGFIELDCGLIHGSSADVGDNLTPESSPLVLLDRLTRLDVNRL FTARSTQQFRLELTGGGIDSQVKDLEGQQQHQQTVPKRSVIGIGAGPHYTLYDPGSDQIDFLTAGSQTPSKHRGFA
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26266; Mature: 26266
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRWALVSGLRGDLEVYNLIQRDLKKTRGVETLFVLGDLIGPDRNCNALLNRLQNPHRNE CCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHHHHHHHCCCCCCC LKPQCIYGWWEEQLLAERGFRGDRNAEALRLNQGEDAVHALVNAVDSAHLNWLASLQFGF CCCCEEHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCE IELDCGLIHGSSADVGDNLTPESSPLVLLDRLTRLDVNRLFTARSTQQFRLELTGGGIDS EEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCH QVKDLEGQQQHQQTVPKRSVIGIGAGPHYTLYDPGSDQIDFLTAGSQTPSKHRGFA HHHHCCCHHHHHHHCCCCCEEEECCCCCEEEECCCCCCEEEEECCCCCCHHCCCCC >Mature Secondary Structure MDRWALVSGLRGDLEVYNLIQRDLKKTRGVETLFVLGDLIGPDRNCNALLNRLQNPHRNE CCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHHHHHHHCCCCCCC LKPQCIYGWWEEQLLAERGFRGDRNAEALRLNQGEDAVHALVNAVDSAHLNWLASLQFGF CCCCEEHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCE IELDCGLIHGSSADVGDNLTPESSPLVLLDRLTRLDVNRLFTARSTQQFRLELTGGGIDS EEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCH QVKDLEGQQQHQQTVPKRSVIGIGAGPHYTLYDPGSDQIDFLTAGSQTPSKHRGFA HHHHCCCHHHHHHHCCCCCEEEECCCCCEEEECCCCCCEEEEECCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA