| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022854
Identifier: 124022854
GI number: 124022854
Start: 1018404
End: 1018895
Strand: Direct
Name: 124022854
Synonym: P9303_11471
Alternate gene names: NA
Gene position: 1018404-1018895 (Clockwise)
Preceding gene: 124022852
Following gene: 124022858
Centisome position: 37.96
GC content: 49.8
Gene sequence:
>492_bases GTGCTCGATGCGTTCATAGCAGAGAAGCCTCCAGGCTTGAACCTTGCTCAAGCCATGCAACTTTTGTATTCCCTTGACGA TGCACCTATTGATCGATGGATTTTGAGTCGCGAAAACCGTACCAGAGTCGTTCAAAACGGGATGTCTATCTCCGACCGGC CCTGGTTCTCACGACCTTTTTGGTTCGGTTGTACCATCCAGCTGCATCAAACTGTAGGGGTCTTGAAGAGATCAATCATG TATTCACTATTCGATTCCGTCTTTGACGTTCCATTCGGCTACAGCATCCCTCGTGATCGCGTTGTTGTGATCCCTGATTC GCAGTACAACAAGCTGCGTGCGCAAGAAAATGAGCGCCAAGTTGCCAAACTTGAAGCTCGCAAAGAGCATCACTCTCAGG TGATTGAGCGCCTCAATGAGCAGATCGGCGAACTCCAAGCTGCACTACCAGCAGCTGAGCCAGATAAAGAGTTAGCGGCC ACAAAAGAGTGA
Upstream 100 bases:
>100_bases GCGTAAGCGTGTGCAGCGTGAGAAGAAATAGCTCGAGAACCTTATTGCTGAATTTCAAGACAACGGCGAGGTATAGGAGC CAAGCGCGGAGCAGTTCTAG
Downstream 100 bases:
>100_bases CCGCTAGCGGCAGCTGGAGTGGGACCCATCTGCCGTCATTTGCTGGGATACAACAGCACGTTCTACGGGGCCTGCGGGCC CCTTTCTCTTGTCTGAGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MLDAFIAEKPPGLNLAQAMQLLYSLDDAPIDRWILSRENRTRVVQNGMSISDRPWFSRPFWFGCTIQLHQTVGVLKRSIM YSLFDSVFDVPFGYSIPRDRVVVIPDSQYNKLRAQENERQVAKLEARKEHHSQVIERLNEQIGELQAALPAAEPDKELAA TKE
Sequences:
>Translated_163_residues MLDAFIAEKPPGLNLAQAMQLLYSLDDAPIDRWILSRENRTRVVQNGMSISDRPWFSRPFWFGCTIQLHQTVGVLKRSIM YSLFDSVFDVPFGYSIPRDRVVVIPDSQYNKLRAQENERQVAKLEARKEHHSQVIERLNEQIGELQAALPAAEPDKELAA TKE >Mature_163_residues MLDAFIAEKPPGLNLAQAMQLLYSLDDAPIDRWILSRENRTRVVQNGMSISDRPWFSRPFWFGCTIQLHQTVGVLKRSIM YSLFDSVFDVPFGYSIPRDRVVVIPDSQYNKLRAQENERQVAKLEARKEHHSQVIERLNEQIGELQAALPAAEPDKELAA TKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18725; Mature: 18725
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAFIAEKPPGLNLAQAMQLLYSLDDAPIDRWILSRENRTRVVQNGMSISDRPWFSRPF CCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCE WFGCTIQLHQTVGVLKRSIMYSLFDSVFDVPFGYSIPRDRVVVIPDSQYNKLRAQENERQ EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH VAKLEARKEHHSQVIERLNEQIGELQAALPAAEPDKELAATKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC >Mature Secondary Structure MLDAFIAEKPPGLNLAQAMQLLYSLDDAPIDRWILSRENRTRVVQNGMSISDRPWFSRPF CCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCE WFGCTIQLHQTVGVLKRSIMYSLFDSVFDVPFGYSIPRDRVVVIPDSQYNKLRAQENERQ EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH VAKLEARKEHHSQVIERLNEQIGELQAALPAAEPDKELAATKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA