| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124022832
Identifier: 124022832
GI number: 124022832
Start: 1006342
End: 1006944
Strand: Reverse
Name: 124022832
Synonym: P9303_11251
Alternate gene names: NA
Gene position: 1006944-1006342 (Counterclockwise)
Preceding gene: 124022833
Following gene: 124022830
Centisome position: 37.54
GC content: 54.73
Gene sequence:
>603_bases ATGACGGCACTTGCAGATCACGCCATGACCTGGATGAAGTTGATGCAAACGGCGAGTCGCCAGGCTCGCGTGGATTTACT GTTCGACTATCTGAGATCGCATGGCCAGTCCAGCTACGACCCATCTGTGAGCCAGCTGGAGCATGCCCTACAAACGGCGC ATTTGGCTCAACAGGAATCGCAACTGCCTCACCTAGTGGTGGCGTCGCTACTCCATGACATTGGTCATTTGATGCTGGAT GAACATGATGAGCGTGGTGATTTCCTCCACCAGGATTGGGCCCACGAGGCCGTCGCGGCACGGGCACTTTCTGAATTTTT CCCATCGAATGTTGTCACGCCGGTCCAGCGCCACGTTTCAGCAAAACGTCTGCTCTGCTCCCTGGACGGGGCATACTACG AGGGTCTATCCGAAGCATCGAAACGTAGTTTTGCTGTTCAGGGCGGTCCTTTGAGTCGATTCGAGGCAGAACGACTCCAG GCGCTCGAAGGAATGCAGGATGCAATGGCTCTTCGTCGTTGGGATGACCGGGCCAAGGCTAAGGGCTTCGAGGTGCCTGG ATTAGAAATGTATTTCGATCTTGCCTTTGTCCACTTACTGTGA
Upstream 100 bases:
>100_bases CCGAAGGCAATTTGCGATCGGACTACTACGACCACAAAAAGGAAGCGCTAGCTCAGGGACGCGTCAGTTTGATCAACCAT TTTCTCGGGGAGGACGTCTC
Downstream 100 bases:
>100_bases ACAAATATCCACAACAGGGTTGACCGCCAAGAAAGTTGATTAAGAACCAGAAAAAATCATATTCTAGTGCAATATTTAAT CAATCAATTTCTTAATCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTALADHAMTWMKLMQTASRQARVDLLFDYLRSHGQSSYDPSVSQLEHALQTAHLAQQESQLPHLVVASLLHDIGHLMLD EHDERGDFLHQDWAHEAVAARALSEFFPSNVVTPVQRHVSAKRLLCSLDGAYYEGLSEASKRSFAVQGGPLSRFEAERLQ ALEGMQDAMALRRWDDRAKAKGFEVPGLEMYFDLAFVHLL
Sequences:
>Translated_200_residues MTALADHAMTWMKLMQTASRQARVDLLFDYLRSHGQSSYDPSVSQLEHALQTAHLAQQESQLPHLVVASLLHDIGHLMLD EHDERGDFLHQDWAHEAVAARALSEFFPSNVVTPVQRHVSAKRLLCSLDGAYYEGLSEASKRSFAVQGGPLSRFEAERLQ ALEGMQDAMALRRWDDRAKAKGFEVPGLEMYFDLAFVHLL >Mature_199_residues TALADHAMTWMKLMQTASRQARVDLLFDYLRSHGQSSYDPSVSQLEHALQTAHLAQQESQLPHLVVASLLHDIGHLMLDE HDERGDFLHQDWAHEAVAARALSEFFPSNVVTPVQRHVSAKRLLCSLDGAYYEGLSEASKRSFAVQGGPLSRFEAERLQA LEGMQDAMALRRWDDRAKAKGFEVPGLEMYFDLAFVHLL
Specific function: Unknown
COG id: COG4341
COG function: function code R; Predicted HD phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22557; Mature: 22426
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALADHAMTWMKLMQTASRQARVDLLFDYLRSHGQSSYDPSVSQLEHALQTAHLAQQES CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH QLPHLVVASLLHDIGHLMLDEHDERGDFLHQDWAHEAVAARALSEFFPSNVVTPVQRHVS CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AKRLLCSLDGAYYEGLSEASKRSFAVQGGPLSRFEAERLQALEGMQDAMALRRWDDRAKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGFEVPGLEMYFDLAFVHLL CCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure TALADHAMTWMKLMQTASRQARVDLLFDYLRSHGQSSYDPSVSQLEHALQTAHLAQQES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH QLPHLVVASLLHDIGHLMLDEHDERGDFLHQDWAHEAVAARALSEFFPSNVVTPVQRHVS CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AKRLLCSLDGAYYEGLSEASKRSFAVQGGPLSRFEAERLQALEGMQDAMALRRWDDRAKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGFEVPGLEMYFDLAFVHLL CCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA