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The map label for this gene is 124022816

Identifier: 124022816

GI number: 124022816

Start: 991898

End: 993565

Strand: Direct

Name: 124022816

Synonym: P9303_11091

Alternate gene names: NA

Gene position: 991898-993565 (Clockwise)

Preceding gene: 124022813

Following gene: 124022822

Centisome position: 36.97

GC content: 47.54

Gene sequence:

>1668_bases
GTGAAACTCTTCCAGCAATTGCTGGTGGCACCTGCTGCCTTGGGCCTGATGGCGCCAATGGCTGCGAATGCCGCAGACCT
AGACATCAAAGGTGTGTCCGATTATTCGGCCTCCAGCGAGCAGGTCACCAGCATCTCCCAATTCCAAGATGTTTACCCAA
CCGATTGGGCTTATCAGGCGCTGAGCAACCTGATTGAGCGCTACGGCTGTGTAGCTGGTTATCCAAGTGGTAGCTACCTG
GGCAACAGAGCAATGACCCGCTTTGAAGCGGCTGCTCTGTTGAATGCCTGCCTCGATCGCATCACTGAAGTCACCGACGA
ACTGCGTCGCTTGCTCAACGAATTCGAGCAGGAGCTTGCCATTCTCAAGGGCCGTGTTGATGGGCTAGAAGCCCGCGTTG
GTGAACTCGAAGCCACTCAGTTCTCAACAACAACCAAGCTTGTTGGTCAGACATCCTTCGTTCTTGGAGCAGTCAATGCT
GGAGGTGATGAGTCCCTTTCAGATCCGTACAACGAAGAAGTTGGAGCGTTTACATTCACATATGATCTGCGCCTTGGTCT
TAATACAAGCTTTACGGGTAAAGATCTTCTTTATACCCGACTTCGTTCGGGAAATATGGACTCAACTGCTTGGGAAGGTG
AAGGTCTTAAGGGATCACTAACAGCTCTAGATACTGCTTCTGCGACTGATGATATCGTAACGATCGATCGCCTCTATTAT
AGGTTCCCTGTTGGCGATGAATTTACATTTATCGCTGGACCATTGGCACGAAATACTGAAATGCTCGGTATTAAGCCCAC
GGCCTATGGAAAGAGCAAAGTACTCGATTACTTTGGTGGAACAATGGGCACTCCTGGCGTCTATAACAAAGAAACAGGAG
GTGCTTTTGGTGCAATATGGAAGCAAAAAACCAGCAAAGGTGATCCAGCATTTAGTGCTTCTGTGAGCTATGTTTCTGAC
GCAGGTGAGGCTAACGATGGCAACCCATCAACAGGTGGGTTTATTACAGACAATGCCGAAGGAAATATTACAGGGCAATT
GGCATATAGCAGTAAAAGATGGGGTGTTGCTTTGGGCTATCGTTACGGTCAATGCGGTGTTAAATTTCGTCGCGGCACCG
ACTTTGTTGCAGACAACAAATGGCATCAAAATTGCCAACAGGTCGTTGGCTTTGATGCTGATGGAGACGAGGTCTTTGAT
CAACGCTCCGGTGCATATTCCAACAACTTTGCTGTTAATGCATTCTGGAAACCTGAGGATTCAGGTTGGATCCCGTCCGT
CAGCGCAGGTTGGGGTCTTTCTGGTCTGAGTGGTGATTTCTACGATCTTGCCGACAACGACCTAGAGGATGATCTTGAGG
ACCAGGTAGCAGATCAATTCCAAAGCTGGATGGTTGGATTGCAATGGAGCGATGTCTTTATTGAAGGTAATTACCTAGGA
CTTGCAGGAGGTCAACCGCAGTTTGTTACCAGTCTTAAGGGTGATGAAACCACTTATGATGGTAATTATGCCTTTGAACT
TTGGTATAAGTTCCAAGTTACTGACAACATCTCAATCACACCAGCTGTGTTTTATCTGAGTCGTCCAATGGGGCAAAATA
CCGGAGATCAGTACGATAACCAGTTCAATGTTTTTGGAGGAGTTGTTCAAACTACGTTTAAGTTCTAA

Upstream 100 bases:

>100_bases
GACCAAGCCTTAACGTCTTCTTAGTCACATGCTTTTGTCAAATTTGTAACTTGTATGCGGGCATTTTCGCCCGTCTCTCA
ATTTCTGTGTGAGGAACCAA

Downstream 100 bases:

>100_bases
CTAATAGGCTTAAAAAGCCAAACTCTCACGGATTAAATTCAATGCCCTCCTTAAACGGAGGGCATTTTTTTATTTTCAAA
TAGCATATTCTCAAAGCATC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQALSNLIERYGCVAGYPSGSYL
GNRAMTRFEAAALLNACLDRITEVTDELRRLLNEFEQELAILKGRVDGLEARVGELEATQFSTTTKLVGQTSFVLGAVNA
GGDESLSDPYNEEVGAFTFTYDLRLGLNTSFTGKDLLYTRLRSGNMDSTAWEGEGLKGSLTALDTASATDDIVTIDRLYY
RFPVGDEFTFIAGPLARNTEMLGIKPTAYGKSKVLDYFGGTMGTPGVYNKETGGAFGAIWKQKTSKGDPAFSASVSYVSD
AGEANDGNPSTGGFITDNAEGNITGQLAYSSKRWGVALGYRYGQCGVKFRRGTDFVADNKWHQNCQQVVGFDADGDEVFD
QRSGAYSNNFAVNAFWKPEDSGWIPSVSAGWGLSGLSGDFYDLADNDLEDDLEDQVADQFQSWMVGLQWSDVFIEGNYLG
LAGGQPQFVTSLKGDETTYDGNYAFELWYKFQVTDNISITPAVFYLSRPMGQNTGDQYDNQFNVFGGVVQTTFKF

Sequences:

>Translated_555_residues
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQALSNLIERYGCVAGYPSGSYL
GNRAMTRFEAAALLNACLDRITEVTDELRRLLNEFEQELAILKGRVDGLEARVGELEATQFSTTTKLVGQTSFVLGAVNA
GGDESLSDPYNEEVGAFTFTYDLRLGLNTSFTGKDLLYTRLRSGNMDSTAWEGEGLKGSLTALDTASATDDIVTIDRLYY
RFPVGDEFTFIAGPLARNTEMLGIKPTAYGKSKVLDYFGGTMGTPGVYNKETGGAFGAIWKQKTSKGDPAFSASVSYVSD
AGEANDGNPSTGGFITDNAEGNITGQLAYSSKRWGVALGYRYGQCGVKFRRGTDFVADNKWHQNCQQVVGFDADGDEVFD
QRSGAYSNNFAVNAFWKPEDSGWIPSVSAGWGLSGLSGDFYDLADNDLEDDLEDQVADQFQSWMVGLQWSDVFIEGNYLG
LAGGQPQFVTSLKGDETTYDGNYAFELWYKFQVTDNISITPAVFYLSRPMGQNTGDQYDNQFNVFGGVVQTTFKF
>Mature_555_residues
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQALSNLIERYGCVAGYPSGSYL
GNRAMTRFEAAALLNACLDRITEVTDELRRLLNEFEQELAILKGRVDGLEARVGELEATQFSTTTKLVGQTSFVLGAVNA
GGDESLSDPYNEEVGAFTFTYDLRLGLNTSFTGKDLLYTRLRSGNMDSTAWEGEGLKGSLTALDTASATDDIVTIDRLYY
RFPVGDEFTFIAGPLARNTEMLGIKPTAYGKSKVLDYFGGTMGTPGVYNKETGGAFGAIWKQKTSKGDPAFSASVSYVSD
AGEANDGNPSTGGFITDNAEGNITGQLAYSSKRWGVALGYRYGQCGVKFRRGTDFVADNKWHQNCQQVVGFDADGDEVFD
QRSGAYSNNFAVNAFWKPEDSGWIPSVSAGWGLSGLSGDFYDLADNDLEDDLEDQVADQFQSWMVGLQWSDVFIEGNYLG
LAGGQPQFVTSLKGDETTYDGNYAFELWYKFQVTDNISITPAVFYLSRPMGQNTGDQYDNQFNVFGGVVQTTFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 60499; Mature: 60499

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQA
CHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
LSNLIERYGCVAGYPSGSYLGNRAMTRFEAAALLNACLDRITEVTDELRRLLNEFEQELA
HHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKGRVDGLEARVGELEATQFSTTTKLVGQTSFVLGAVNAGGDESLSDPYNEEVGAFTFT
HHHCCCCCHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE
YDLRLGLNTSFTGKDLLYTRLRSGNMDSTAWEGEGLKGSLTALDTASATDDIVTIDRLYY
EEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEHEEE
RFPVGDEFTFIAGPLARNTEMLGIKPTAYGKSKVLDYFGGTMGTPGVYNKETGGAFGAIW
ECCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
KQKTSKGDPAFSASVSYVSDAGEANDGNPSTGGFITDNAEGNITGQLAYSSKRWGVALGY
HHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEE
RYGQCGVKFRRGTDFVADNKWHQNCQQVVGFDADGDEVFDQRSGAYSNNFAVNAFWKPED
EECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCC
SGWIPSVSAGWGLSGLSGDFYDLADNDLEDDLEDQVADQFQSWMVGLQWSDVFIEGNYLG
CCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCEEE
LAGGQPQFVTSLKGDETTYDGNYAFELWYKFQVTDNISITPAVFYLSRPMGQNTGDQYDN
ECCCCCCEEEECCCCCCEECCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCC
QFNVFGGVVQTTFKF
CCHHHHHHHHHEECC
>Mature Secondary Structure
MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQA
CHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
LSNLIERYGCVAGYPSGSYLGNRAMTRFEAAALLNACLDRITEVTDELRRLLNEFEQELA
HHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKGRVDGLEARVGELEATQFSTTTKLVGQTSFVLGAVNAGGDESLSDPYNEEVGAFTFT
HHHCCCCCHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE
YDLRLGLNTSFTGKDLLYTRLRSGNMDSTAWEGEGLKGSLTALDTASATDDIVTIDRLYY
EEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEHEEE
RFPVGDEFTFIAGPLARNTEMLGIKPTAYGKSKVLDYFGGTMGTPGVYNKETGGAFGAIW
ECCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
KQKTSKGDPAFSASVSYVSDAGEANDGNPSTGGFITDNAEGNITGQLAYSSKRWGVALGY
HHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEE
RYGQCGVKFRRGTDFVADNKWHQNCQQVVGFDADGDEVFDQRSGAYSNNFAVNAFWKPED
EECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCC
SGWIPSVSAGWGLSGLSGDFYDLADNDLEDDLEDQVADQFQSWMVGLQWSDVFIEGNYLG
CCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCEEE
LAGGQPQFVTSLKGDETTYDGNYAFELWYKFQVTDNISITPAVFYLSRPMGQNTGDQYDN
ECCCCCCEEEECCCCCCEECCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCC
QFNVFGGVVQTTFKF
CCHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]