| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022760
Identifier: 124022760
GI number: 124022760
Start: 952627
End: 953052
Strand: Direct
Name: 124022760
Synonym: P9303_10531
Alternate gene names: NA
Gene position: 952627-953052 (Clockwise)
Preceding gene: 124022759
Following gene: 124022761
Centisome position: 35.51
GC content: 53.29
Gene sequence:
>426_bases ATGACGCACGAGGTCTCTCTTGCTGTGCTGGAAAGGGATGGTCGCTGGCTCCTTCAACTTCGTGATGACATCGAAGGAAT CTTGTTTCCAGGTCATTGGGGATTATTTGGAGGTCACCTGAATGCAGGAGAAACGCCTTTTCAGGCCGTGAACCGTGAAC TTGTCGAGGAAATTAACTGGGCACCTGAAAATCTCCTCGTTCCTTGGTTCAGCAACCACAGCAGCACGCTTGTGGTGCAT GTGTTTCGAGGGCCACTGTGTGTTTCCCTTGGCCAATTGCAGTTGCTTGAGGGGCAGGATATGACCCTGGCGAATTTGGA GGAGCTGGCGAGTGGTGCTATCTGGAGCCCCAGACTTAGGGAGTTCAGACCGATTGCGCCAGGCCTGGATATCGTGCTGC AGCGTCAGCTCTCAGATCAAGACTGA
Upstream 100 bases:
>100_bases GATGAGCCGAATTTTTGAACCTTTTGGCGGGTCTATAAGACGTTAAGTAAAAGGGTGCGGCAGGCTGGCGTTATGGGTAA CGACTTTTCGAAATGAAGAG
Downstream 100 bases:
>100_bases AGCCAGGTTGTGTGGAGCAATATTTTGAGGTTTTGCGGAATTTCGATGCAGATAGGTCTTGTAGGCCGACCCCTTGCCAA GACAGCATGAGAGGACTCTC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NUDIX Family Protein; Nudix Family Protein; Mutator MutT Protein; Hydrolase NUDIX Family
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTHEVSLAVLERDGRWLLQLRDDIEGILFPGHWGLFGGHLNAGETPFQAVNRELVEEINWAPENLLVPWFSNHSSTLVVH VFRGPLCVSLGQLQLLEGQDMTLANLEELASGAIWSPRLREFRPIAPGLDIVLQRQLSDQD
Sequences:
>Translated_141_residues MTHEVSLAVLERDGRWLLQLRDDIEGILFPGHWGLFGGHLNAGETPFQAVNRELVEEINWAPENLLVPWFSNHSSTLVVH VFRGPLCVSLGQLQLLEGQDMTLANLEELASGAIWSPRLREFRPIAPGLDIVLQRQLSDQD >Mature_140_residues THEVSLAVLERDGRWLLQLRDDIEGILFPGHWGLFGGHLNAGETPFQAVNRELVEEINWAPENLLVPWFSNHSSTLVVHV FRGPLCVSLGQLQLLEGQDMTLANLEELASGAIWSPRLREFRPIAPGLDIVLQRQLSDQD
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15871; Mature: 15740
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHEVSLAVLERDGRWLLQLRDDIEGILFPGHWGLFGGHLNAGETPFQAVNRELVEEINW CCCCEEEEEEECCCEEEEEECCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHCCC APENLLVPWFSNHSSTLVVHVFRGPLCVSLGQLQLLEGQDMTLANLEELASGAIWSPRLR CCCCEEEEEECCCCCEEEEEEECCCEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCCHH EFRPIAPGLDIVLQRQLSDQD HCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure THEVSLAVLERDGRWLLQLRDDIEGILFPGHWGLFGGHLNAGETPFQAVNRELVEEINW CCCEEEEEEECCCEEEEEECCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHCCC APENLLVPWFSNHSSTLVVHVFRGPLCVSLGQLQLLEGQDMTLANLEELASGAIWSPRLR CCCCEEEEEECCCCCEEEEEEECCCEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCCHH EFRPIAPGLDIVLQRQLSDQD HCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA