Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is yceA [C]

Identifier: 124022704

GI number: 124022704

Start: 909044

End: 909976

Strand: Direct

Name: yceA [C]

Synonym: P9303_09971

Alternate gene names: 124022704

Gene position: 909044-909976 (Clockwise)

Preceding gene: 124022703

Following gene: 124022706

Centisome position: 33.89

GC content: 46.52

Gene sequence:

>933_bases
ATGAATCTGCAAGATGATCAGACCTCTGCAGATCTATTTCAGGTAGCGACTTTCTATTCCTTTACTGCTTGGCCTGAGGT
CACTATTACCTGCTTATTGCAGGATCTGCTGAGCCTTGGGGATGAACATCAACTGATGGGAACTGTGCTGTTAGCAGAGG
AAGGGGTGAATGGAACGATTTGTGGATCGGTTGATGGTGTTAGCGCTTTGCTTGAGAGGTTAGAACGCGATTTGATCGAG
GGTTTGTTTGAGCTGAAAATTAGCTGGACGCCTGAGCAGGCTTTTCGTCGCTTCAAGGTTCGCCGTAAGGCAGAGATTGT
GACCATGGGTCTTGCCGGGTTGAATCCATCAAAGACGGTGGGGACTTATGTGGACGCTCATGAATGGAATGATCTAATTG
ATGATCCAGATACTCTCTTGATCGATACGCGAAATGACTATGAGATTGCGATTGGGGAATTTAAAGGAGCAATAAACCCC
CAAACGAAGTGCTTCCGCGACTTTCCTGCTTGGGTTGAACAGCAGTTGCGTTCCATGGTTAAAGCAAAAACTTCAGCACG
AATAGCCATGTATTGCACAGGTGGTATTCGCTGTGAGAAGGCTACGTCTTATCTGATTGAGAAGGGCTTTACTAACGTCC
ATCATCTTCGTGGTGGCATTCTTCGTTATTTTGAGGAGGTATCTCAATCTGAAAGTCGCTGGCAAGGAGAGTGTTTTGTT
TTTGATCAACGTGTGGCTTTGAATCATCAGCTTTCACCTGGTGTTTATCGTCTTTGTCATGCCTGTGGAATGCCCCTCAC
CCCTGAGGATCAGGCGATGAATAGTTATCGGACTGGTGTTCAGTGTCGCCACTGCGTGGATCAATTTAGTGATACGGACC
GTATTCGTTTTGCTGAAAGACAACGGCAGATGGAACACAGTTCTAGGAAGTAG

Upstream 100 bases:

>100_bases
ACGGCGATAGTTTGCTAACTACCAGCAATCCTGATGTAAAAACTGATCGCGAACTTCTCTCTCAGGCAGGAGTTCATGCG
AATTGGGAGGAGAGTGACGA

Downstream 100 bases:

>100_bases
ACAACACAGCCATGAAGACAGCGTGTCTGTATATTTTCTTAGTTAGAGATTGGCTAAGTTTAGGCCAAGAGCATTTGAAT
GTCTCCAAGCAGGCTTTCCA

Product: sulfurtransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNLQDDQTSADLFQVATFYSFTAWPEVTITCLLQDLLSLGDEHQLMGTVLLAEEGVNGTICGSVDGVSALLERLERDLIE
GLFELKISWTPEQAFRRFKVRRKAEIVTMGLAGLNPSKTVGTYVDAHEWNDLIDDPDTLLIDTRNDYEIAIGEFKGAINP
QTKCFRDFPAWVEQQLRSMVKAKTSARIAMYCTGGIRCEKATSYLIEKGFTNVHHLRGGILRYFEEVSQSESRWQGECFV
FDQRVALNHQLSPGVYRLCHACGMPLTPEDQAMNSYRTGVQCRHCVDQFSDTDRIRFAERQRQMEHSSRK

Sequences:

>Translated_310_residues
MNLQDDQTSADLFQVATFYSFTAWPEVTITCLLQDLLSLGDEHQLMGTVLLAEEGVNGTICGSVDGVSALLERLERDLIE
GLFELKISWTPEQAFRRFKVRRKAEIVTMGLAGLNPSKTVGTYVDAHEWNDLIDDPDTLLIDTRNDYEIAIGEFKGAINP
QTKCFRDFPAWVEQQLRSMVKAKTSARIAMYCTGGIRCEKATSYLIEKGFTNVHHLRGGILRYFEEVSQSESRWQGECFV
FDQRVALNHQLSPGVYRLCHACGMPLTPEDQAMNSYRTGVQCRHCVDQFSDTDRIRFAERQRQMEHSSRK
>Mature_310_residues
MNLQDDQTSADLFQVATFYSFTAWPEVTITCLLQDLLSLGDEHQLMGTVLLAEEGVNGTICGSVDGVSALLERLERDLIE
GLFELKISWTPEQAFRRFKVRRKAEIVTMGLAGLNPSKTVGTYVDAHEWNDLIDDPDTLLIDTRNDYEIAIGEFKGAINP
QTKCFRDFPAWVEQQLRSMVKAKTSARIAMYCTGGIRCEKATSYLIEKGFTNVHHLRGGILRYFEEVSQSESRWQGECFV
FDQRVALNHQLSPGVYRLCHACGMPLTPEDQAMNSYRTGVQCRHCVDQFSDTDRIRFAERQRQMEHSSRK

Specific function: Unknown. [C]

COG id: COG1054

COG function: function code R; Predicted sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Homo sapiens, GI111038120, Length=267, Percent_Identity=32.2097378277154, Blast_Score=115, Evalue=4e-26,
Organism=Escherichia coli, GI1787294, Length=285, Percent_Identity=32.280701754386, Blast_Score=134, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR020936 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 35294; Mature: 35294

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQDDQTSADLFQVATFYSFTAWPEVTITCLLQDLLSLGDEHQLMGTVLLAEEGVNGTI
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCEE
CGSVDGVSALLERLERDLIEGLFELKISWTPEQAFRRFKVRRKAEIVTMGLAGLNPSKTV
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
GTYVDAHEWNDLIDDPDTLLIDTRNDYEIAIGEFKGAINPQTKCFRDFPAWVEQQLRSMV
CCEECHHHHHHHCCCCCEEEEECCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KAKTSARIAMYCTGGIRCEKATSYLIEKGFTNVHHLRGGILRYFEEVSQSESRWQGECFV
HHHHCCEEEEEEECCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
FDQRVALNHQLSPGVYRLCHACGMPLTPEDQAMNSYRTGVQCRHCVDQFSDTDRIRFAER
EECHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH
QRQMEHSSRK
HHHHHHHCCC
>Mature Secondary Structure
MNLQDDQTSADLFQVATFYSFTAWPEVTITCLLQDLLSLGDEHQLMGTVLLAEEGVNGTI
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCEE
CGSVDGVSALLERLERDLIEGLFELKISWTPEQAFRRFKVRRKAEIVTMGLAGLNPSKTV
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
GTYVDAHEWNDLIDDPDTLLIDTRNDYEIAIGEFKGAINPQTKCFRDFPAWVEQQLRSMV
CCEECHHHHHHHCCCCCEEEEECCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KAKTSARIAMYCTGGIRCEKATSYLIEKGFTNVHHLRGGILRYFEEVSQSESRWQGECFV
HHHHCCEEEEEEECCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
FDQRVALNHQLSPGVYRLCHACGMPLTPEDQAMNSYRTGVQCRHCVDQFSDTDRIRFAER
EECHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH
QRQMEHSSRK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]