Click here to switch to the map view.

The map label for this gene is yjeP [H]

Identifier: 124022548

GI number: 124022548

Start: 761660

End: 762922

Strand: Reverse

Name: yjeP [H]

Synonym: P9303_08391

Alternate gene names: 124022548

Gene position: 762922-761660 (Counterclockwise)

Preceding gene: 124022549

Following gene: 124022546

Centisome position: 28.44

GC content: 43.78

Gene sequence:

>1263_bases
ATGAGAAGTCCTCTCGATCTACTGCAACTCGCCCTGGAAATGGGGCAACGGCCAGTTGTTCTATGGCAACTACTAGGGAT
CGCTATTGCACTTGGCGCATCTAAATTACTGATAGGCGTGCGCAAAAGATCAGATCAATTCTGGTTGATGCCTATTGCTA
GCTTGTTACTTGGTTTAGTGGCGCTGTTGCTGGCAAGCATCGGCATACCAAATGAAATCGTCTTAGTAATAACAGCTGTA
TTTGGAAGCTTGACCTTGTTGCAAGTTATCTATGCATTGCTGAGAAAGCTGCGCATGGAAGCAACTCTCGACAAGTTCTT
CTCTCGCTTTGCCAGACCTGCTGTCATTGTTATTTCCGTAGCACTTCTAATTCGTGCTGCCGGCTTTGAAGAGCTTTGGT
CAGTATCAATATTGCCCACCAATGCGGGAGGTCAGTACCCTCTGCGGATCACTATTGGGGAAATATCTAGATCTCTTATA
GCCTTCTATTTGCTATTTGTCACCTCAGGATTAGCCAGCAAGGCTGCAAGTATAGTCAGCAAGTTCTCACTAGGCGTATC
AACAGAATCCTCTGAAATTATTGCTGAGCTGTCTCGTTATATCTATATCTTTTCAGGGTTAATCTTTATCTTGATATCAA
TTGGTATCACCGGAAATTTCCTTATAGCAATTGCAGCATCTTTATCTGTAGGCATTGGTTTTGGAATAAAAGATATTGCA
GCGAACTTTATCAGCGGAGTTTGGTTATTGCTTGAGGGCGTCATTCGTCCAGGCGACATTATCTATATAGATCAAGATCC
CTGCATAGTTAATCGACTAGGGCCACGTGCCGCAAGACTCTGGCGTGAACGTGACAATGCAGACCTAGTAGTTCCAAATC
TCCAGTTCTTTTCTGATACAACCACCACCTACACCAGTACCGATAGATTACGCCGCGCTGAGGTACAAGTTAGAGCTGCT
TTAAACCATAAACCTTCTGAAGTCATGGCCTTGCTCGAGCAAATACCATCAAAGATTGATGGGGTATTAACAAGTAAACC
ACCCTCAGCTTTGTTAATAGATTACGAACCTGCCGCAATCCTATACAGCTTACGCTTCATGATTAATGATCCAATGAGGA
ATATTGGCATTACAAGTTCAGTCCGGCAGGCCATTTGGGAATGTTTTGAGGAGCATGGCATTGAAATCCCTTTCCAAAAA
CACGTCTTAATCTCAGATGCACGCCATAAAGCCCAACTTGCATCAAAAAAACCGCAGCAATGA

Upstream 100 bases:

>100_bases
GGAATGGCTTGTTACAGGAAACATTCATGCCCTACTGGAACGAAGCAATAGGAGTGCAAGAGCTAGTGGATAACGTCATC
GATGCTTTCGCTGTACGCCG

Downstream 100 bases:

>100_bases
TCAACCTTAACAATTGAAAAATCAGTGCCAAGCTTTCAACAAATCACTATCAGTTAATCCAACTTATTCATTAATAACTA
GCAACCAGCGCCGCAACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MRSPLDLLQLALEMGQRPVVLWQLLGIAIALGASKLLIGVRKRSDQFWLMPIASLLLGLVALLLASIGIPNEIVLVITAV
FGSLTLLQVIYALLRKLRMEATLDKFFSRFARPAVIVISVALLIRAAGFEELWSVSILPTNAGGQYPLRITIGEISRSLI
AFYLLFVTSGLASKAASIVSKFSLGVSTESSEIIAELSRYIYIFSGLIFILISIGITGNFLIAIAASLSVGIGFGIKDIA
ANFISGVWLLLEGVIRPGDIIYIDQDPCIVNRLGPRAARLWRERDNADLVVPNLQFFSDTTTTYTSTDRLRRAEVQVRAA
LNHKPSEVMALLEQIPSKIDGVLTSKPPSALLIDYEPAAILYSLRFMINDPMRNIGITSSVRQAIWECFEEHGIEIPFQK
HVLISDARHKAQLASKKPQQ

Sequences:

>Translated_420_residues
MRSPLDLLQLALEMGQRPVVLWQLLGIAIALGASKLLIGVRKRSDQFWLMPIASLLLGLVALLLASIGIPNEIVLVITAV
FGSLTLLQVIYALLRKLRMEATLDKFFSRFARPAVIVISVALLIRAAGFEELWSVSILPTNAGGQYPLRITIGEISRSLI
AFYLLFVTSGLASKAASIVSKFSLGVSTESSEIIAELSRYIYIFSGLIFILISIGITGNFLIAIAASLSVGIGFGIKDIA
ANFISGVWLLLEGVIRPGDIIYIDQDPCIVNRLGPRAARLWRERDNADLVVPNLQFFSDTTTTYTSTDRLRRAEVQVRAA
LNHKPSEVMALLEQIPSKIDGVLTSKPPSALLIDYEPAAILYSLRFMINDPMRNIGITSSVRQAIWECFEEHGIEIPFQK
HVLISDARHKAQLASKKPQQ
>Mature_420_residues
MRSPLDLLQLALEMGQRPVVLWQLLGIAIALGASKLLIGVRKRSDQFWLMPIASLLLGLVALLLASIGIPNEIVLVITAV
FGSLTLLQVIYALLRKLRMEATLDKFFSRFARPAVIVISVALLIRAAGFEELWSVSILPTNAGGQYPLRITIGEISRSLI
AFYLLFVTSGLASKAASIVSKFSLGVSTESSEIIAELSRYIYIFSGLIFILISIGITGNFLIAIAASLSVGIGFGIKDIA
ANFISGVWLLLEGVIRPGDIIYIDQDPCIVNRLGPRAARLWRERDNADLVVPNLQFFSDTTTTYTSTDRLRRAEVQVRAA
LNHKPSEVMALLEQIPSKIDGVLTSKPPSALLIDYEPAAILYSLRFMINDPMRNIGITSSVRQAIWECFEEHGIEIPFQK
HVLISDARHKAQLASKKPQQ

Specific function: Unknown

COG id: COG3264

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI2367355, Length=279, Percent_Identity=26.5232974910394, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1786670, Length=265, Percent_Identity=24.1509433962264, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 46194; Mature: 46194

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPLDLLQLALEMGQRPVVLWQLLGIAIALGASKLLIGVRKRSDQFWLMPIASLLLGLV
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEHHHHHHHHHHHH
ALLLASIGIPNEIVLVITAVFGSLTLLQVIYALLRKLRMEATLDKFFSRFARPAVIVISV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ALLIRAAGFEELWSVSILPTNAGGQYPLRITIGEISRSLIAFYLLFVTSGLASKAASIVS
HHHHHHCCHHHHHEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFSLGVSTESSEIIAELSRYIYIFSGLIFILISIGITGNFLIAIAASLSVGIGFGIKDIA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH
ANFISGVWLLLEGVIRPGDIIYIDQDPCIVNRLGPRAARLWRERDNADLVVPNLQFFSDT
HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCHHHHHHHHCCCCCCEEECCHHHHCCC
TTTYTSTDRLRRAEVQVRAALNHKPSEVMALLEQIPSKIDGVLTSKPPSALLIDYEPAAI
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH
LYSLRFMINDPMRNIGITSSVRQAIWECFEEHGIEIPFQKHVLISDARHKAQLASKKPQQ
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRSPLDLLQLALEMGQRPVVLWQLLGIAIALGASKLLIGVRKRSDQFWLMPIASLLLGLV
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEHHHHHHHHHHHH
ALLLASIGIPNEIVLVITAVFGSLTLLQVIYALLRKLRMEATLDKFFSRFARPAVIVISV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ALLIRAAGFEELWSVSILPTNAGGQYPLRITIGEISRSLIAFYLLFVTSGLASKAASIVS
HHHHHHCCHHHHHEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFSLGVSTESSEIIAELSRYIYIFSGLIFILISIGITGNFLIAIAASLSVGIGFGIKDIA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH
ANFISGVWLLLEGVIRPGDIIYIDQDPCIVNRLGPRAARLWRERDNADLVVPNLQFFSDT
HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCHHHHHHHHCCCCCCEEECCHHHHCCC
TTTYTSTDRLRRAEVQVRAALNHKPSEVMALLEQIPSKIDGVLTSKPPSALLIDYEPAAI
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH
LYSLRFMINDPMRNIGITSSVRQAIWECFEEHGIEIPFQKHVLISDARHKAQLASKKPQQ
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 3042771 [H]