| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is csoS3
Identifier: 124022521
GI number: 124022521
Start: 741976
End: 743523
Strand: Direct
Name: csoS3
Synonym: P9303_08121
Alternate gene names: NA
Gene position: 741976-743523 (Clockwise)
Preceding gene: 124022520
Following gene: 124022522
Centisome position: 27.66
GC content: 46.25
Gene sequence:
>1548_bases ATGGCCTATCGCAATCGCAATTTGGCCTCTCAAACGCAAAGACCCTTGGCGCCGACTGCTCCAAGGCGGAGGCCTGTGGT AACAACACCTCAGATCTCTGATCGCTCAAGGCTTAGAGGGTTTACCAATGTTGGTTCAGGACCTTGCCACCCTCTCACAG ACAGAGCTGCAAACCAGCATCTGCAGGCTTATGAAGCCAATGTTAAAGGCTGTTTTGAGCTGATTGTGCCTTTGCTTAAA AGGATCTCAGCACTTCAGCATGATCAGGATTTTGTCTCAAAGTCTCAAAGTCTTGCTCGCTCTGAACTTGGTTTTGATTT GCCGAGCCACCTTTTGGAACAGGCTTGGGTACGAGCATTGGATATGAGGGCCTTATTTGCTTGGTGTGTGTTTCAGTTTC ATCAGCAGATGAGTGACCGCTTTTTTCAAGAAGACCCTCTGCAAGGAGGAGAAGGCAGCATTCAAGCAAAGCATTTCCAA TCATTTCTTGTTGATTGTGGTTTTCATCTCCTTGATGTCTCCCCCTGTGCTGATGGACGCTTGGCGCATACGATTGCTTA TGCCTTACGGATTCCATTTAGTTCAGTAAGACGTCGCTCCCATGCAGGCGCTCTATTTGATGTTGAGAAAACTGTCAACC GTTGGATTAAGACAGAACACAGACGATATCGAGAAGGTGTGCCAAATTCAGCCGACTCTCCAACACGTTATCTCAAGGTT GTCACCTATCATTTTAGTTCCCTTGATCCATCTCATCAAGGATGTGCGGCTCATGGGAGTGATGATGCCTTGGCAGCTTC TGCTGGCCAACAGCGCCTGCTTGATTTTCGTGAATCCGTCGAAAATAGTTTCTGTTGTGGTGCATCAGTAGACCTTCTTT TGATCGGGCTTGATACCGATACTGATGCCATTCGCGTACATGTTCCTGCGGCAGATGGTTCAATTGTTTTAGATGAATGG CTTTCTGCGGAAGATCTTTATCACGAGACGCTTGCTCTAAATTTAGATGAGGCGATGCAACATATTGCTGAACGTGTTGA AGCAAGTGCACCTAAGAAACCCGACGAGGGGATGGTTGCATTCATTGCGAAATTGATTGCAAACAACTTTTCTCAGATTG ACTACGTGAAACAATCACATGCTGGCCCCTACCCAGATGCTGGGCATGCAGAGCGCTTTATTGGAGTTGGAATAGGTTTT AAGGAAGTGCATCTTCGCAACCTAACTTATTTCGCTCATTTGGATACTGTCGAAGTAGGTGCCCCAGATTTAGATGTAGG AGTGAAAATTTTTAAAGGGTTGAATGTTTCTCGAGACCTACCAATTCCTGTTGTTGTTCGTTTTGATTATTCTGGCCAAG TCCCAGGGGCAAGGGATCGTGCTGTCACTGATTGCTATCGCGTAAATCAAGCTATTGCTGAGCGTTATTCTGATCTTTTC GATCAGGGCCTTCTTCATACATTCTTGACGATTCGTGATCGTGATAAAAAAGACACTTCAGAGGTAGTCGGTTCCTCCTT GGAGCCTGTTCATCAGGAGGCACACTGA
Upstream 100 bases:
>100_bases GAACTTTCTCAACCAATGAGTCGCGTAACAGGGTCAAGTGGTAATACTGATCAAGGCTCCTTGATCACAGTCTCTGGCGG CGCAAGGGGTTGATTGATTG
Downstream 100 bases:
>100_bases CATGTTGATCTGCAAGGTTCTTAAGCCGCTTGTTTCCACCAATCGAATCCCTGGATTCGAACACAAACACCTTCAAGTTG TTCTTGATGGAAGTTCCAAG
Product: carboxysome shell protein CsoS3
Products: NA
Alternate protein names: Carboxysome Shell; Carboxysome Peptide; Carboxysome Shell Carbonic Anhydrase Epsilon
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MAYRNRNLASQTQRPLAPTAPRRRPVVTTPQISDRSRLRGFTNVGSGPCHPLTDRAANQHLQAYEANVKGCFELIVPLLK RISALQHDQDFVSKSQSLARSELGFDLPSHLLEQAWVRALDMRALFAWCVFQFHQQMSDRFFQEDPLQGGEGSIQAKHFQ SFLVDCGFHLLDVSPCADGRLAHTIAYALRIPFSSVRRRSHAGALFDVEKTVNRWIKTEHRRYREGVPNSADSPTRYLKV VTYHFSSLDPSHQGCAAHGSDDALAASAGQQRLLDFRESVENSFCCGASVDLLLIGLDTDTDAIRVHVPAADGSIVLDEW LSAEDLYHETLALNLDEAMQHIAERVEASAPKKPDEGMVAFIAKLIANNFSQIDYVKQSHAGPYPDAGHAERFIGVGIGF KEVHLRNLTYFAHLDTVEVGAPDLDVGVKIFKGLNVSRDLPIPVVVRFDYSGQVPGARDRAVTDCYRVNQAIAERYSDLF DQGLLHTFLTIRDRDKKDTSEVVGSSLEPVHQEAH
Sequences:
>Translated_515_residues MAYRNRNLASQTQRPLAPTAPRRRPVVTTPQISDRSRLRGFTNVGSGPCHPLTDRAANQHLQAYEANVKGCFELIVPLLK RISALQHDQDFVSKSQSLARSELGFDLPSHLLEQAWVRALDMRALFAWCVFQFHQQMSDRFFQEDPLQGGEGSIQAKHFQ SFLVDCGFHLLDVSPCADGRLAHTIAYALRIPFSSVRRRSHAGALFDVEKTVNRWIKTEHRRYREGVPNSADSPTRYLKV VTYHFSSLDPSHQGCAAHGSDDALAASAGQQRLLDFRESVENSFCCGASVDLLLIGLDTDTDAIRVHVPAADGSIVLDEW LSAEDLYHETLALNLDEAMQHIAERVEASAPKKPDEGMVAFIAKLIANNFSQIDYVKQSHAGPYPDAGHAERFIGVGIGF KEVHLRNLTYFAHLDTVEVGAPDLDVGVKIFKGLNVSRDLPIPVVVRFDYSGQVPGARDRAVTDCYRVNQAIAERYSDLF DQGLLHTFLTIRDRDKKDTSEVVGSSLEPVHQEAH >Mature_514_residues AYRNRNLASQTQRPLAPTAPRRRPVVTTPQISDRSRLRGFTNVGSGPCHPLTDRAANQHLQAYEANVKGCFELIVPLLKR ISALQHDQDFVSKSQSLARSELGFDLPSHLLEQAWVRALDMRALFAWCVFQFHQQMSDRFFQEDPLQGGEGSIQAKHFQS FLVDCGFHLLDVSPCADGRLAHTIAYALRIPFSSVRRRSHAGALFDVEKTVNRWIKTEHRRYREGVPNSADSPTRYLKVV TYHFSSLDPSHQGCAAHGSDDALAASAGQQRLLDFRESVENSFCCGASVDLLLIGLDTDTDAIRVHVPAADGSIVLDEWL SAEDLYHETLALNLDEAMQHIAERVEASAPKKPDEGMVAFIAKLIANNFSQIDYVKQSHAGPYPDAGHAERFIGVGIGFK EVHLRNLTYFAHLDTVEVGAPDLDVGVKIFKGLNVSRDLPIPVVVRFDYSGQVPGARDRAVTDCYRVNQAIAERYSDLFD QGLLHTFLTIRDRDKKDTSEVVGSSLEPVHQEAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57391; Mature: 57260
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRNRNLASQTQRPLAPTAPRRRPVVTTPQISDRSRLRGFTNVGSGPCHPLTDRAANQH CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHH LQAYEANVKGCFELIVPLLKRISALQHDQDFVSKSQSLARSELGFDLPSHLLEQAWVRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DMRALFAWCVFQFHQQMSDRFFQEDPLQGGEGSIQAKHFQSFLVDCGFHLLDVSPCADGR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHEEECCCCCCCH LAHTIAYALRIPFSSVRRRSHAGALFDVEKTVNRWIKTEHRRYREGVPNSADSPTRYLKV HHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH VTYHFSSLDPSHQGCAAHGSDDALAASAGQQRLLDFRESVENSFCCGASVDLLLIGLDTD HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCC TDAIRVHVPAADGSIVLDEWLSAEDLYHETLALNLDEAMQHIAERVEASAPKKPDEGMVA CCEEEEEEECCCCCEEHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHH FIAKLIANNFSQIDYVKQSHAGPYPDAGHAERFIGVGIGFKEVHLRNLTYFAHLDTVEVG HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHEECCCCHHHHHHHHEEEEEEECEEECC APDLDVGVKIFKGLNVSRDLPIPVVVRFDYSGQVPGARDRAVTDCYRVNQAIAERYSDLF CCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DQGLLHTFLTIRDRDKKDTSEVVGSSLEPVHQEAH HHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHCCC >Mature Secondary Structure AYRNRNLASQTQRPLAPTAPRRRPVVTTPQISDRSRLRGFTNVGSGPCHPLTDRAANQH CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHH LQAYEANVKGCFELIVPLLKRISALQHDQDFVSKSQSLARSELGFDLPSHLLEQAWVRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DMRALFAWCVFQFHQQMSDRFFQEDPLQGGEGSIQAKHFQSFLVDCGFHLLDVSPCADGR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHEEECCCCCCCH LAHTIAYALRIPFSSVRRRSHAGALFDVEKTVNRWIKTEHRRYREGVPNSADSPTRYLKV HHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH VTYHFSSLDPSHQGCAAHGSDDALAASAGQQRLLDFRESVENSFCCGASVDLLLIGLDTD HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCC TDAIRVHVPAADGSIVLDEWLSAEDLYHETLALNLDEAMQHIAERVEASAPKKPDEGMVA CCEEEEEEECCCCCEEHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHH FIAKLIANNFSQIDYVKQSHAGPYPDAGHAERFIGVGIGFKEVHLRNLTYFAHLDTVEVG HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHEECCCCHHHHHHHHEEEEEEECEEECC APDLDVGVKIFKGLNVSRDLPIPVVVRFDYSGQVPGARDRAVTDCYRVNQAIAERYSDLF CCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DQGLLHTFLTIRDRDKKDTSEVVGSSLEPVHQEAH HHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA