| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is lplA [H]
Identifier: 124022497
GI number: 124022497
Start: 722786
End: 723562
Strand: Reverse
Name: lplA [H]
Synonym: P9303_07881
Alternate gene names: 124022497
Gene position: 723562-722786 (Counterclockwise)
Preceding gene: 124022502
Following gene: 124022495
Centisome position: 26.97
GC content: 55.21
Gene sequence:
>777_bases TTGTCTGGCCCAGAACAGATGGCCCTCGATGAGGTGCTTCTCGAGTCTTACCAAGCAGATGCGAAACCACTGCCAACACT GCGCTTCTATCAATGGAACGGTCCATGGCTTTCCCTTGGTCGCAACCAACGCCACTGGCCAGAGCACTGGAATGCCCTGG CCAAACGAGGAGATCTACAGCTGGTTCGGCGACCCAGTGGCGGCAGTGCAGTCCTGCATGCAGGAGGGCTCACTTATGCA CTGATCTGGCCCTCTCCTCCCCGCCAGAGACAACAAGCCTATAAACAAGCTTGTCAATGGCTCATACGGGGCTTTAAAGA ACTCGAATTACCTTTGCAATTTGGCGACCACCCTGCCAGGGGGGCCAGAGAAAGTAACTGCTTCGCCACAGCCACAGCCG CTGATCTTGTGGATTCTCAGGGTCACAAACGCATCGGCAGTGCCCAACTCTGGCGTCAGGGTCATCTCCTTCAACATGGC GAAATCATCCTCAATCCCCCTCAAAGACTCTGGCGAGAGGTCTTCGATTGCGAACCACCCAGCCAAGCACCAGCATCAAT CCCAAGGCAAGAGCTGAGCCATCACCTGCAAACAACGTTTTGCTCCTGTTGGCCAGAGGTGAGCTGGCAAGAGAGCCCTA TCACCAGCGATGAATGGAGCTCAGTTGCCAACGAAGCAGCGAACTATGAAGTACTGCTGGATGCCTCAGGCTGCTCAACC AATCCGCCAGAGATCATCGACTCCACAACTTTAGGCAGTGCCATACCCAGGGGATAG
Upstream 100 bases:
>100_bases ACACCAGCAAATCCCACAACACCATCACTGCTCTATGCCGACAGCTGCATCCTGCCTACCTATCTCGCCAGGTCGCGGCC GCTTGATCTCCCCTTTGCAA
Downstream 100 bases:
>100_bases GTGTTCTGACGGCGAGCAGCTTCGAGAAACTGAGCAGGAAGCCTTACCCCAAGACGCTTAAGAACAGCTTCGGAGAGATC AATTCGATCTAATGTTCCGC
Product: biotin/lipoate A/B protein ligase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSGPEQMALDEVLLESYQADAKPLPTLRFYQWNGPWLSLGRNQRHWPEHWNALAKRGDLQLVRRPSGGSAVLHAGGLTYA LIWPSPPRQRQQAYKQACQWLIRGFKELELPLQFGDHPARGARESNCFATATAADLVDSQGHKRIGSAQLWRQGHLLQHG EIILNPPQRLWREVFDCEPPSQAPASIPRQELSHHLQTTFCSCWPEVSWQESPITSDEWSSVANEAANYEVLLDASGCST NPPEIIDSTTLGSAIPRG
Sequences:
>Translated_258_residues MSGPEQMALDEVLLESYQADAKPLPTLRFYQWNGPWLSLGRNQRHWPEHWNALAKRGDLQLVRRPSGGSAVLHAGGLTYA LIWPSPPRQRQQAYKQACQWLIRGFKELELPLQFGDHPARGARESNCFATATAADLVDSQGHKRIGSAQLWRQGHLLQHG EIILNPPQRLWREVFDCEPPSQAPASIPRQELSHHLQTTFCSCWPEVSWQESPITSDEWSSVANEAANYEVLLDASGCST NPPEIIDSTTLGSAIPRG >Mature_257_residues SGPEQMALDEVLLESYQADAKPLPTLRFYQWNGPWLSLGRNQRHWPEHWNALAKRGDLQLVRRPSGGSAVLHAGGLTYAL IWPSPPRQRQQAYKQACQWLIRGFKELELPLQFGDHPARGARESNCFATATAADLVDSQGHKRIGSAQLWRQGHLLQHGE IILNPPQRLWREVFDCEPPSQAPASIPRQELSHHLQTTFCSCWPEVSWQESPITSDEWSSVANEAANYEVLLDASGCSTN PPEIIDSTTLGSAIPRG
Specific function: Unknown
COG id: COG0095
COG function: function code H; Lipoate-protein ligase A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004143 [H]
Pfam domain/function: PF03099 BPL_LipA_LipB [H]
EC number: NA
Molecular weight: Translated: 28888; Mature: 28756
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPEQMALDEVLLESYQADAKPLPTLRFYQWNGPWLSLGRNQRHWPEHWNALAKRGDLQ CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHCCCEE LVRRPSGGSAVLHAGGLTYALIWPSPPRQRQQAYKQACQWLIRGFKELELPLQFGDHPAR EEECCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC GARESNCFATATAADLVDSQGHKRIGSAQLWRQGHLLQHGEIILNPPQRLWREVFDCEPP CCCCCCCEEHHHHHHHHHCCCCHHCCHHHHHHCCCCEECCCEEECCHHHHHHHHHCCCCC SQAPASIPRQELSHHLQTTFCSCWPEVSWQESPITSDEWSSVANEAANYEVLLDASGCST CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCC NPPEIIDSTTLGSAIPRG CCHHHHCCCHHCCCCCCC >Mature Secondary Structure SGPEQMALDEVLLESYQADAKPLPTLRFYQWNGPWLSLGRNQRHWPEHWNALAKRGDLQ CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHCCCEE LVRRPSGGSAVLHAGGLTYALIWPSPPRQRQQAYKQACQWLIRGFKELELPLQFGDHPAR EEECCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC GARESNCFATATAADLVDSQGHKRIGSAQLWRQGHLLQHGEIILNPPQRLWREVFDCEPP CCCCCCCEEHHHHHHHHHCCCCHHCCHHHHHHCCCCEECCCEEECCHHHHHHHHHCCCCC SQAPASIPRQELSHHLQTTFCSCWPEVSWQESPITSDEWSSVANEAANYEVLLDASGCST CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCC NPPEIIDSTTLGSAIPRG CCHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]