| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is folE [H]
Identifier: 124022493
GI number: 124022493
Start: 719615
End: 720388
Strand: Direct
Name: folE [H]
Synonym: P9303_07841
Alternate gene names: 124022493
Gene position: 719615-720388 (Clockwise)
Preceding gene: 124022492
Following gene: 124022494
Centisome position: 26.82
GC content: 44.06
Gene sequence:
>774_bases ATGACTTCCATAATCCCAGCATCATCTAAAGACCTAGGTCAGCATCGCAATCGCAATGGCTTGCCTGGGAATGGTCAGCC AAAAAATGAAAATAAGATCTCTGAACGTATACGTGCCCGCCTTGTTGCAGAAGATGTTTCCTTCCTCGCCAACGACAATA TTGCAGAACACATTCAACCTGGAGAGCTGAAGGAACTTGAAGTAGAAGTTGCCGATCGCGTGCGAGAACTGCTCCAAAGC CTAGTGATTGATATTGATAATGACCACAACACACAAGAGACTGCCGAGCGGGTTGCTCGCATGTATTTAAATGAAGTATT TAAAGGTCGATTCTATGAGCAGCCAGATGTTACTAGCTTTCCAAATACAAAAGATTTAGATGAAATTTATACTGTTGGCC CCATAACTGTTCGTTCTGCTTGCTCTCATCATTTGGTTCCTATCCTTGGTAACTGTTGGATTGGCATTAAGCCTGGCAGC CGTGTAATTGGGCTCTCAAAGTTTGCGAGAGTGGCTGACTGGGTCTTTTCAAGGCCACATATCCAGGAAGAAGCTGTAAT GATTCTTGCTGATGAAATAGAGCGTTTATGTGAGCCTAAGGGTTTAGGGATAATAGTAAAAGCACAACATTATTGTATGA AATGGCGAGGAGTGAAAGAGCCAAATACCAGCATGGTGAACTCAGTTGTCAGAGGAGTTTTTCGTCATGACCCTAGCCTT AAGCAGGAATTTTTCGAGCTTGTTCGCCAGCAGGAGTCCACGCTAGGAGCTTAA
Upstream 100 bases:
>100_bases GCGGCCGCCGCCCTTCTACACTTGGCTCAGCAGCCACCATCACAGGTGATTGAAGATCTCACTCTAATGCCAGCCACTGG CGCCTTTTAACCAGCCTTTA
Downstream 100 bases:
>100_bases AAGTTCTTTCTAGGTCTTTTAGAGGTATAAGGCTTAATAATGGCCAGCTCTGATTAACATGTGTGTATCAGCTTGGCTTG TTACTGGCCAAGTCGATAAA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTSIIPASSKDLGQHRNRNGLPGNGQPKNENKISERIRARLVAEDVSFLANDNIAEHIQPGELKELEVEVADRVRELLQS LVIDIDNDHNTQETAERVARMYLNEVFKGRFYEQPDVTSFPNTKDLDEIYTVGPITVRSACSHHLVPILGNCWIGIKPGS RVIGLSKFARVADWVFSRPHIQEEAVMILADEIERLCEPKGLGIIVKAQHYCMKWRGVKEPNTSMVNSVVRGVFRHDPSL KQEFFELVRQQESTLGA
Sequences:
>Translated_257_residues MTSIIPASSKDLGQHRNRNGLPGNGQPKNENKISERIRARLVAEDVSFLANDNIAEHIQPGELKELEVEVADRVRELLQS LVIDIDNDHNTQETAERVARMYLNEVFKGRFYEQPDVTSFPNTKDLDEIYTVGPITVRSACSHHLVPILGNCWIGIKPGS RVIGLSKFARVADWVFSRPHIQEEAVMILADEIERLCEPKGLGIIVKAQHYCMKWRGVKEPNTSMVNSVVRGVFRHDPSL KQEFFELVRQQESTLGA >Mature_256_residues TSIIPASSKDLGQHRNRNGLPGNGQPKNENKISERIRARLVAEDVSFLANDNIAEHIQPGELKELEVEVADRVRELLQSL VIDIDNDHNTQETAERVARMYLNEVFKGRFYEQPDVTSFPNTKDLDEIYTVGPITVRSACSHHLVPILGNCWIGIKPGSR VIGLSKFARVADWVFSRPHIQEEAVMILADEIERLCEPKGLGIIVKAQHYCMKWRGVKEPNTSMVNSVVRGVFRHDPSLK QEFFELVRQQESTLGA
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=126, Percent_Identity=41.2698412698413, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI4503949, Length=126, Percent_Identity=41.2698412698413, Blast_Score=106, Evalue=2e-23, Organism=Escherichia coli, GI1788476, Length=183, Percent_Identity=31.6939890710383, Blast_Score=114, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17560486, Length=178, Percent_Identity=33.7078651685393, Blast_Score=110, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6321706, Length=190, Percent_Identity=29.4736842105263, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI24656782, Length=161, Percent_Identity=33.5403726708075, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24656796, Length=158, Percent_Identity=34.1772151898734, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24656791, Length=125, Percent_Identity=38.4, Blast_Score=93, Evalue=2e-19,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 29064; Mature: 28933
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIIPASSKDLGQHRNRNGLPGNGQPKNENKISERIRARLVAEDVSFLANDNIAEHIQP CCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC GELKELEVEVADRVRELLQSLVIDIDNDHNTQETAERVARMYLNEVFKGRFYEQPDVTSF CCHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PNTKDLDEIYTVGPITVRSACSHHLVPILGNCWIGIKPGSRVIGLSKFARVADWVFSRPH CCCCCHHHHHHCCCHHHHHHHHHCCHHHHCCCEEEECCCCCEECHHHHHHHHHHHHCCCC IQEEAVMILADEIERLCEPKGLGIIVKAQHYCMKWRGVKEPNTSMVNSVVRGVFRHDPSL CHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH KQEFFELVRQQESTLGA HHHHHHHHHHHHHHCCC >Mature Secondary Structure TSIIPASSKDLGQHRNRNGLPGNGQPKNENKISERIRARLVAEDVSFLANDNIAEHIQP CCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC GELKELEVEVADRVRELLQSLVIDIDNDHNTQETAERVARMYLNEVFKGRFYEQPDVTSF CCHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PNTKDLDEIYTVGPITVRSACSHHLVPILGNCWIGIKPGSRVIGLSKFARVADWVFSRPH CCCCCHHHHHHCCCHHHHHHHHHCCHHHHCCCEEEECCCCCEECHHHHHHHHHHHHCCCC IQEEAVMILADEIERLCEPKGLGIIVKAQHYCMKWRGVKEPNTSMVNSVVRGVFRHDPSL CHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH KQEFFELVRQQESTLGA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA