Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is yfiH [C]

Identifier: 124022482

GI number: 124022482

Start: 711947

End: 712801

Strand: Reverse

Name: yfiH [C]

Synonym: P9303_07731

Alternate gene names: 124022482

Gene position: 712801-711947 (Counterclockwise)

Preceding gene: 124022483

Following gene: 124022479

Centisome position: 26.57

GC content: 54.85

Gene sequence:

>855_bases
ATGACATCGCTGGGGCAGGCAGCGGAAACTGACAAACAAGACCCGCTTGCCACTCCAGATACCCTGTTTAACCAACTCAA
AGGATGGACCTGGGTAGGTTGCTATGGGGGCTACTACCTGCAGGCCGACCTTCTACAAAAGGCTGGTTTCGAACATGGAT
TCTTCACGCGACGCTGGCAAGATCGAGGCCCCGATCAACTAGCTGGTTACCTAAGCGCAGGCATTAGCGTTCATAGACCC
CAACAAGTTCATGGCGGCAGGGTGCTCGAAGCCTCACAAGCCAACCGCCCACCCTGGCCGGAAGCTGATGGCCTCGTCAG
CGACAGGGGTGGACAAAGTCTCTGGGTCTGCACTGCCGACTGCACTCCAGTACTGATTGCCGACCACTCGACAGGACATG
CAGCAGCATGTCATGTGGGCTGGCGAGGCTTAACCGCCAAAATCCTGCAGGAAGCTCTAGCAAAGCTGGAATCTCGAGGA
GCAAAAATCGAGACTCTGCTTGTTGCTCTAGGACCAGCTGTGAGCGGTTCCAACTATCAGATTCAAATTGATGTTGCCGA
AGCTGTGGCAAAGAGCCTCGAAGCAGATCCAAACAACCCACCAATCCAGCTGGAAAAACGGCTCTCCGCGCTAAAAGAAC
GAGGCATTCTCGATGCAGAAAAAGAGCCACAGCAACTGCGTCTCGACATTCGCTTGGCTGCTGCTGACCAACTAAAACGA
GCTGGGTTAAGCAGCGAGCAGATCAGCAGTTGCCCGCTATGCACAGTGGCAGAGTCCAGCCTCTTTTACTCATGGCGCAG
GGACCACGTCAAAGCCGTGCAGTGGAGTGGAATCGTCGCTCAAGCTGGAGAATGA

Upstream 100 bases:

>100_bases
CAAGAGAGCAAGCCGGCGGGCTGCAATTCATCTCTGTGCAGACCTCCCCAGAAGAAAAACGATTTGCTGGTTTCTGGATG
CTGCGTGACCTGCCGCAACC

Downstream 100 bases:

>100_bases
ACAACCACAAGCTGTTTCGCCAGGGCTTCTGCAGCCCTAATCCCATCGATGCCAGCCGAAAGGATGCCTCCGGCATAACC
AGCCCCTTCTCCAGCAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTSLGQAAETDKQDPLATPDTLFNQLKGWTWVGCYGGYYLQADLLQKAGFEHGFFTRRWQDRGPDQLAGYLSAGISVHRP
QQVHGGRVLEASQANRPPWPEADGLVSDRGGQSLWVCTADCTPVLIADHSTGHAAACHVGWRGLTAKILQEALAKLESRG
AKIETLLVALGPAVSGSNYQIQIDVAEAVAKSLEADPNNPPIQLEKRLSALKERGILDAEKEPQQLRLDIRLAAADQLKR
AGLSSEQISSCPLCTVAESSLFYSWRRDHVKAVQWSGIVAQAGE

Sequences:

>Translated_284_residues
MTSLGQAAETDKQDPLATPDTLFNQLKGWTWVGCYGGYYLQADLLQKAGFEHGFFTRRWQDRGPDQLAGYLSAGISVHRP
QQVHGGRVLEASQANRPPWPEADGLVSDRGGQSLWVCTADCTPVLIADHSTGHAAACHVGWRGLTAKILQEALAKLESRG
AKIETLLVALGPAVSGSNYQIQIDVAEAVAKSLEADPNNPPIQLEKRLSALKERGILDAEKEPQQLRLDIRLAAADQLKR
AGLSSEQISSCPLCTVAESSLFYSWRRDHVKAVQWSGIVAQAGE
>Mature_283_residues
TSLGQAAETDKQDPLATPDTLFNQLKGWTWVGCYGGYYLQADLLQKAGFEHGFFTRRWQDRGPDQLAGYLSAGISVHRPQ
QVHGGRVLEASQANRPPWPEADGLVSDRGGQSLWVCTADCTPVLIADHSTGHAAACHVGWRGLTAKILQEALAKLESRGA
KIETLLVALGPAVSGSNYQIQIDVAEAVAKSLEADPNNPPIQLEKRLSALKERGILDAEKEPQQLRLDIRLAAADQLKRA
GLSSEQISSCPLCTVAESSLFYSWRRDHVKAVQWSGIVAQAGE

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=190, Percent_Identity=31.0526315789474, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 30819; Mature: 30688

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLGQAAETDKQDPLATPDTLFNQLKGWTWVGCYGGYYLQADLLQKAGFEHGFFTRRWQ
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEHHHHHHHCCCCCCCCCHHHC
DRGPDQLAGYLSAGISVHRPQQVHGGRVLEASQANRPPWPEADGLVSDRGGQSLWVCTAD
CCCHHHHHHHHHCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCCEECCCCCEEEEEECC
CTPVLIADHSTGHAAACHVGWRGLTAKILQEALAKLESRGAKIETLLVALGPAVSGSNYQ
CCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEE
IQIDVAEAVAKSLEADPNNPPIQLEKRLSALKERGILDAEKEPQQLRLDIRLAAADQLKR
EEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHH
AGLSSEQISSCPLCTVAESSLFYSWRRDHVKAVQWSGIVAQAGE
CCCCHHHHCCCCCCEEHHHHHHHHHHHHHHHEEEECCEEECCCC
>Mature Secondary Structure 
TSLGQAAETDKQDPLATPDTLFNQLKGWTWVGCYGGYYLQADLLQKAGFEHGFFTRRWQ
CCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEHHHHHHHCCCCCCCCCHHHC
DRGPDQLAGYLSAGISVHRPQQVHGGRVLEASQANRPPWPEADGLVSDRGGQSLWVCTAD
CCCHHHHHHHHHCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCCEECCCCCEEEEEECC
CTPVLIADHSTGHAAACHVGWRGLTAKILQEALAKLESRGAKIETLLVALGPAVSGSNYQ
CCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEE
IQIDVAEAVAKSLEADPNNPPIQLEKRLSALKERGILDAEKEPQQLRLDIRLAAADQLKR
EEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHH
AGLSSEQISSCPLCTVAESSLFYSWRRDHVKAVQWSGIVAQAGE
CCCCHHHHCCCCCCEEHHHHHHHHHHHHHHHEEEECCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]