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The map label for this gene is 124022446

Identifier: 124022446

GI number: 124022446

Start: 680222

End: 680704

Strand: Reverse

Name: 124022446

Synonym: P9303_07371

Alternate gene names: NA

Gene position: 680704-680222 (Counterclockwise)

Preceding gene: 124022448

Following gene: 124022444

Centisome position: 25.37

GC content: 54.66

Gene sequence:

>483_bases
ATGAACCACTGCGTACTTGAAGTGGAAGTGATCCAGGCACCAACCATTCGTTATACCCAAGACAACCAAACACCGATCGC
CGAAATGGAGGTGCGCTTCGATGCACTTCGTGTCGACACTGCCCCTGGTCAGCTCAAGGTGGTGGGATGGGGCAACCTTG
CCCAGGATCTACAAAACCGCGTCCAAGTTGGGCAAAGGCTTGTGATTGAAGGTCGACTACGAATGAACACAGTTCCTCGC
CAAGATGGCACCAAGGAAAAGCGCGCCGAATTCACGCTCGCGCGTCTTCATTCCCTCTCCGGCCAAGCTGGTCAACCTGC
TAGTAGCCCAGAACGACCTACTAGCACTACAACCAACCAGACCTCACGACCTATACCAATAGCCGAGACGCCAACACCCA
AACCGGCAACAACTGCAGAACCAGAAGCTGCCAGCTGGAATAGTGCCCCACTGGTGCCAGACACCGATGACATTCCCTTC
TGA

Upstream 100 bases:

>100_bases
ACCAAAACAGGCCCTTCACCAGTCCCAGATAGCAACCAGACATGCCGCTGGTCATTCCTGCAAGCTTGCATCAAAATGAC
TTTCACTCCAAGGGAAGGAC

Downstream 100 bases:

>100_bases
ACGCATTCATTACCCGAAGCTGTTCTCGTCTTCAAGGCCCTCGGCAGCTCGAGTCAACAGCTGGCCCAATTCCCTCTCCA
AAGCAGCCAAATCAAGGCGC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: Thylakoid-associated SSB [H]

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNHCVLEVEVIQAPTIRYTQDNQTPIAEMEVRFDALRVDTAPGQLKVVGWGNLAQDLQNRVQVGQRLVIEGRLRMNTVPR
QDGTKEKRAEFTLARLHSLSGQAGQPASSPERPTSTTTNQTSRPIPIAETPTPKPATTAEPEAASWNSAPLVPDTDDIPF

Sequences:

>Translated_160_residues
MNHCVLEVEVIQAPTIRYTQDNQTPIAEMEVRFDALRVDTAPGQLKVVGWGNLAQDLQNRVQVGQRLVIEGRLRMNTVPR
QDGTKEKRAEFTLARLHSLSGQAGQPASSPERPTSTTTNQTSRPIPIAETPTPKPATTAEPEAASWNSAPLVPDTDDIPF
>Mature_160_residues
MNHCVLEVEVIQAPTIRYTQDNQTPIAEMEVRFDALRVDTAPGQLKVVGWGNLAQDLQNRVQVGQRLVIEGRLRMNTVPR
QDGTKEKRAEFTLARLHSLSGQAGQPASSPERPTSTTTNQTSRPIPIAETPTPKPATTAEPEAASWNSAPLVPDTDDIPF

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17549; Mature: 17549

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHCVLEVEVIQAPTIRYTQDNQTPIAEMEVRFDALRVDTAPGQLKVVGWGNLAQDLQNR
CCCEEEEEEEECCCEEEEECCCCCCHHHEEEEEEEEEEECCCCEEEEEECCHHHHHHHHH
VQVGQRLVIEGRLRMNTVPRQDGTKEKRAEFTLARLHSLSGQAGQPASSPERPTSTTTNQ
HHHHHEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
TSRPIPIAETPTPKPATTAEPEAASWNSAPLVPDTDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNHCVLEVEVIQAPTIRYTQDNQTPIAEMEVRFDALRVDTAPGQLKVVGWGNLAQDLQNR
CCCEEEEEEEECCCEEEEECCCCCCHHHEEEEEEEEEEECCCCEEEEEECCHHHHHHHHH
VQVGQRLVIEGRLRMNTVPRQDGTKEKRAEFTLARLHSLSGQAGQPASSPERPTSTTTNQ
HHHHHEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
TSRPIPIAETPTPKPATTAEPEAASWNSAPLVPDTDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]