| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022429
Identifier: 124022429
GI number: 124022429
Start: 667002
End: 669209
Strand: Reverse
Name: 124022429
Synonym: P9303_07201
Alternate gene names: NA
Gene position: 669209-667002 (Counterclockwise)
Preceding gene: 124022430
Following gene: 124022425
Centisome position: 24.95
GC content: 42.16
Gene sequence:
>2208_bases ATGAGCTACGATCCAGGATACACCAATCCCATATATAGCATACCCACAAAATATTCAGGGGGTAACCTCCCAATACCAAC ATACCAATTTCTGCAGGACGTCCAGCAACAACAAGCTCAAAATTTTTCTATTTTCCCAACTGGAGCAACGCTCATCTCTG GCCTTGGCTGGGCATGGATAAATCAACAGCTCGCCAATTATGAACAAGCCAATTATAAAAAAACAGTACCTTTATTCCAT GGCTGGAGCATCAACGGATGGTATAACGCTTATTTGGAAGGTTCAACAGCCGGGACTAATAATCTACCTAACCTTGGCGA GCAGGCTTACGACACATTGAGCCGGCGTGGTCCCTTTCGAAATGCGTTATATCAACCAATGACAGTAAACCCCTATTCAT CTGCTAGTGAATATTTAAGTGGCCTAGCTATTCACCCCAACACATTTAATGCAGATGATCTAAAGGTGCATGGATCTAGC AATCGCCGAGTTAATGGCGCGAGTCCAACAATAAAACCTCAGACACGCGTTACGCAGGGAACTGAGTCAAAAAAGGATTG GTTCGTAATTAGTGTCCCCAAACATGGAGCTGCAATCAGCGAAGATTACTCAATAACATTTTCTTCTGAAACAGGCGCAA GCGTTGATCAGTCGCACGGATGGTCAAGTCAAACAAGTGTAGAAGCGACAACGGGAATTAGTGCATCCTTAGGGCCTGTA GATGCATCTTTTTCAGCAACTGTTGGCAAAACTTGGGAGCTTAATGGTGACAAGACAGCTAGCAACCACAACACTAAAAC AACAACAACAACAGCTTCGAATACATACACTGTCAAACCAGGTCAGAGTATCGCCCTACTGGGAACTTACATGCAGGGTA CTCTTCCAATGACATATAACTCTCCTGCAGTAATCGACTATCCGGGCAATTATGGAGGAGCAGGTACATTTGGAGCGAAA GGTGCTTTAGCCTCGACGGGACAAACAGTGTTGAATATGGGGAGCAGGTATACTCCACCTTCTCCTTTGAGTGTAACAGC TGCAGACGTTAACCATTACTGCCGTGCAGCGATGGTTCCTGGGCACCAACATATATCTGAAGCGAGCCAAATGGGCAATA GCCTTTATAGTCTTACGTCAAGTGGTACAGTTAGTCTCAAAGATGTAGGCCAACATGAGATCAAGGAGTATGTTGTAATC GGAGGGGAATGGGTGTCTAGTCTTAGCGCAACCAGCCTTCAAGGTGAAAGTCAAAATGATGACTTGTCCACCAAAAATGC GATGGAATCTACAAGCTATACACCTCACGAAGGAGACACTTTAATTGTTAATGGCGTTGAGAAAAATATAGGCGTCCTGT ATGATGAAGCCAATAAAGCCAATGGTGTTTATTTGGGCAGCAAATATGACGACAGGTTCTATTTAAATGGTCCAAATCAA ACAGTTCATACATATTCTGGCGAAGACCATGTAGAAGGTTCTATCTATAATGACAAAATATTCGCAGATAACAATGGATC TAGTGGTAATAGTATTGAGTCTGGCGACGGGGATGACACTATTAGCGCGATTAACGGTGGAGACTATATAGATGCAGGTG CTGGCGATGACAATGTTTATGTAACACTAGATGATAATCTAGTCGACGAAGTCAACCTCGGCAGCGGTTCTGACACCTTA ACCATAGACCTATCAAAAGCTCCAAAAAGATATGGACTAACTGTAAACGATTTAGAATATACAGATAAGCATATTTTTAA GGGTGGATCTGTTGAAGCAGAGATATTTGGCACATCTGTTCTTCTTTATTCCAAAGGAAACCATATTGCCACTTTCTTAG ATTATGCGAAGCAGTTTGATGGGTATAATATTCATAAATTACAAGAAATTGGCCTTCTAAATATGCATGTCCTAGGTGAT TCAAATGATTATGATTATGTTGCTGATTGGCGCGACCCGCTTATCACAGCAAAAGCCGAAGGAAAAACTATATATGATGA TTATGATTCTCTTTTGAACTCTAACTCATCAACATTAAAGGAAACTCTGAAAGGCATGCAAGAATACTTCTTTGAAGAGT CAACAAACAAGTTGACGAAATGGGGTATGGCTCACGCAGACGAATACGAAAGTGCATCAGATTTCGCACATGCTCTCCTG GATCAAGGCAGAAGCTCTACTATTGAGTTACCATTCGGTTATATTTAA
Upstream 100 bases:
>100_bases ACGATGCTACAAAACATTGCACAAAAGAAATGAACGTCTTAAAGATTCTCAAGTAAGCCCAAAAGATAATTACAATTCAT CATAATGCAACATCTTGCAA
Downstream 100 bases:
>100_bases ATCTTCTTAGACAATCAACACCAAGAAAAGTAAGCGTACCACCTCAAAACAATCGACTTAAGATCTAACCTTATTAAATA ATAATTACAGCATAAGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MSYDPGYTNPIYSIPTKYSGGNLPIPTYQFLQDVQQQQAQNFSIFPTGATLISGLGWAWINQQLANYEQANYKKTVPLFH GWSINGWYNAYLEGSTAGTNNLPNLGEQAYDTLSRRGPFRNALYQPMTVNPYSSASEYLSGLAIHPNTFNADDLKVHGSS NRRVNGASPTIKPQTRVTQGTESKKDWFVISVPKHGAAISEDYSITFSSETGASVDQSHGWSSQTSVEATTGISASLGPV DASFSATVGKTWELNGDKTASNHNTKTTTTTASNTYTVKPGQSIALLGTYMQGTLPMTYNSPAVIDYPGNYGGAGTFGAK GALASTGQTVLNMGSRYTPPSPLSVTAADVNHYCRAAMVPGHQHISEASQMGNSLYSLTSSGTVSLKDVGQHEIKEYVVI GGEWVSSLSATSLQGESQNDDLSTKNAMESTSYTPHEGDTLIVNGVEKNIGVLYDEANKANGVYLGSKYDDRFYLNGPNQ TVHTYSGEDHVEGSIYNDKIFADNNGSSGNSIESGDGDDTISAINGGDYIDAGAGDDNVYVTLDDNLVDEVNLGSGSDTL TIDLSKAPKRYGLTVNDLEYTDKHIFKGGSVEAEIFGTSVLLYSKGNHIATFLDYAKQFDGYNIHKLQEIGLLNMHVLGD SNDYDYVADWRDPLITAKAEGKTIYDDYDSLLNSNSSTLKETLKGMQEYFFEESTNKLTKWGMAHADEYESASDFAHALL DQGRSSTIELPFGYI
Sequences:
>Translated_735_residues MSYDPGYTNPIYSIPTKYSGGNLPIPTYQFLQDVQQQQAQNFSIFPTGATLISGLGWAWINQQLANYEQANYKKTVPLFH GWSINGWYNAYLEGSTAGTNNLPNLGEQAYDTLSRRGPFRNALYQPMTVNPYSSASEYLSGLAIHPNTFNADDLKVHGSS NRRVNGASPTIKPQTRVTQGTESKKDWFVISVPKHGAAISEDYSITFSSETGASVDQSHGWSSQTSVEATTGISASLGPV DASFSATVGKTWELNGDKTASNHNTKTTTTTASNTYTVKPGQSIALLGTYMQGTLPMTYNSPAVIDYPGNYGGAGTFGAK GALASTGQTVLNMGSRYTPPSPLSVTAADVNHYCRAAMVPGHQHISEASQMGNSLYSLTSSGTVSLKDVGQHEIKEYVVI GGEWVSSLSATSLQGESQNDDLSTKNAMESTSYTPHEGDTLIVNGVEKNIGVLYDEANKANGVYLGSKYDDRFYLNGPNQ TVHTYSGEDHVEGSIYNDKIFADNNGSSGNSIESGDGDDTISAINGGDYIDAGAGDDNVYVTLDDNLVDEVNLGSGSDTL TIDLSKAPKRYGLTVNDLEYTDKHIFKGGSVEAEIFGTSVLLYSKGNHIATFLDYAKQFDGYNIHKLQEIGLLNMHVLGD SNDYDYVADWRDPLITAKAEGKTIYDDYDSLLNSNSSTLKETLKGMQEYFFEESTNKLTKWGMAHADEYESASDFAHALL DQGRSSTIELPFGYI >Mature_734_residues SYDPGYTNPIYSIPTKYSGGNLPIPTYQFLQDVQQQQAQNFSIFPTGATLISGLGWAWINQQLANYEQANYKKTVPLFHG WSINGWYNAYLEGSTAGTNNLPNLGEQAYDTLSRRGPFRNALYQPMTVNPYSSASEYLSGLAIHPNTFNADDLKVHGSSN RRVNGASPTIKPQTRVTQGTESKKDWFVISVPKHGAAISEDYSITFSSETGASVDQSHGWSSQTSVEATTGISASLGPVD ASFSATVGKTWELNGDKTASNHNTKTTTTTASNTYTVKPGQSIALLGTYMQGTLPMTYNSPAVIDYPGNYGGAGTFGAKG ALASTGQTVLNMGSRYTPPSPLSVTAADVNHYCRAAMVPGHQHISEASQMGNSLYSLTSSGTVSLKDVGQHEIKEYVVIG GEWVSSLSATSLQGESQNDDLSTKNAMESTSYTPHEGDTLIVNGVEKNIGVLYDEANKANGVYLGSKYDDRFYLNGPNQT VHTYSGEDHVEGSIYNDKIFADNNGSSGNSIESGDGDDTISAINGGDYIDAGAGDDNVYVTLDDNLVDEVNLGSGSDTLT IDLSKAPKRYGLTVNDLEYTDKHIFKGGSVEAEIFGTSVLLYSKGNHIATFLDYAKQFDGYNIHKLQEIGLLNMHVLGDS NDYDYVADWRDPLITAKAEGKTIYDDYDSLLNSNSSTLKETLKGMQEYFFEESTNKLTKWGMAHADEYESASDFAHALLD QGRSSTIELPFGYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79541; Mature: 79409
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYDPGYTNPIYSIPTKYSGGNLPIPTYQFLQDVQQQQAQNFSIFPTGATLISGLGWAWI CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHCCCHHHH NQQLANYEQANYKKTVPLFHGWSINGWYNAYLEGSTAGTNNLPNLGEQAYDTLSRRGPFR HHHHHCHHHCCCCCCCCEEECCEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHH NALYQPMTVNPYSSASEYLSGLAIHPNTFNADDLKVHGSSNRRVNGASPTIKPQTRVTQG HHHCCCEECCCCCCHHHHHCCEEECCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCC TESKKDWFVISVPKHGAAISEDYSITFSSETGASVDQSHGWSSQTSVEATTGISASLGPV CCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC DASFSATVGKTWELNGDKTASNHNTKTTTTTASNTYTVKPGQSIALLGTYMQGTLPMTYN CCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCEEEECCCCEEEEEEEECCCEEEEEEC SPAVIDYPGNYGGAGTFGAKGALASTGQTVLNMGSRYTPPSPLSVTAADVNHYCRAAMVP CCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEHHHHHHHHHEEECC GHQHISEASQMGNSLYSLTSSGTVSLKDVGQHEIKEYVVIGGEWVSSLSATSLQGESQND CHHHHHHHHHHCCCEEEECCCCEEEHHHCCHHHCEEEEEECCHHHHHHHHHCCCCCCCCC DLSTKNAMESTSYTPHEGDTLIVNGVEKNIGVLYDEANKANGVYLGSKYDDRFYLNGPNQ CCCHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEECCCCCCEEEECCCCC TVHTYSGEDHVEGSIYNDKIFADNNGSSGNSIESGDGDDTISAINGGDYIDAGAGDDNVY EEEEECCCCCCCCEEECCEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEE VTLDDNLVDEVNLGSGSDTLTIDLSKAPKRYGLTVNDLEYTDKHIFKGGSVEAEIFGTSV EEECCCCCCEECCCCCCCEEEEEECCCCHHHCCEECCCCCCHHHHCCCCCEEEEEEEEEE LLYSKGNHIATFLDYAKQFDGYNIHKLQEIGLLNMHVLGDSNDYDYVADWRDPLITAKAE EEEECCCCHHHHHHHHHHCCCCCEEHHHHCCEEEEEEECCCCCCCEEECCCCCEEEEECC GKTIYDDYDSLLNSNSSTLKETLKGMQEYFFEESTNKLTKWGMAHADEYESASDFAHALL CCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHH DQGRSSTIELPFGYI HCCCCCEEECCCCCC >Mature Secondary Structure SYDPGYTNPIYSIPTKYSGGNLPIPTYQFLQDVQQQQAQNFSIFPTGATLISGLGWAWI CCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHCCCHHHH NQQLANYEQANYKKTVPLFHGWSINGWYNAYLEGSTAGTNNLPNLGEQAYDTLSRRGPFR HHHHHCHHHCCCCCCCCEEECCEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHH NALYQPMTVNPYSSASEYLSGLAIHPNTFNADDLKVHGSSNRRVNGASPTIKPQTRVTQG HHHCCCEECCCCCCHHHHHCCEEECCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCC TESKKDWFVISVPKHGAAISEDYSITFSSETGASVDQSHGWSSQTSVEATTGISASLGPV CCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC DASFSATVGKTWELNGDKTASNHNTKTTTTTASNTYTVKPGQSIALLGTYMQGTLPMTYN CCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCEEEECCCCEEEEEEEECCCEEEEEEC SPAVIDYPGNYGGAGTFGAKGALASTGQTVLNMGSRYTPPSPLSVTAADVNHYCRAAMVP CCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEHHHHHHHHHEEECC GHQHISEASQMGNSLYSLTSSGTVSLKDVGQHEIKEYVVIGGEWVSSLSATSLQGESQND CHHHHHHHHHHCCCEEEECCCCEEEHHHCCHHHCEEEEEECCHHHHHHHHHCCCCCCCCC DLSTKNAMESTSYTPHEGDTLIVNGVEKNIGVLYDEANKANGVYLGSKYDDRFYLNGPNQ CCCHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEECCCCCCEEEECCCCC TVHTYSGEDHVEGSIYNDKIFADNNGSSGNSIESGDGDDTISAINGGDYIDAGAGDDNVY EEEEECCCCCCCCEEECCEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEE VTLDDNLVDEVNLGSGSDTLTIDLSKAPKRYGLTVNDLEYTDKHIFKGGSVEAEIFGTSV EEECCCCCCEECCCCCCCEEEEEECCCCHHHCCEECCCCCCHHHHCCCCCEEEEEEEEEE LLYSKGNHIATFLDYAKQFDGYNIHKLQEIGLLNMHVLGDSNDYDYVADWRDPLITAKAE EEEECCCCHHHHHHHHHHCCCCCEEHHHHCCEEEEEEECCCCCCCEEECCCCCEEEEECC GKTIYDDYDSLLNSNSSTLKETLKGMQEYFFEESTNKLTKWGMAHADEYESASDFAHALL CCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHH DQGRSSTIELPFGYI HCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA