| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022427
Identifier: 124022427
GI number: 124022427
Start: 664347
End: 665897
Strand: Direct
Name: 124022427
Synonym: P9303_07181
Alternate gene names: NA
Gene position: 664347-665897 (Clockwise)
Preceding gene: 124022426
Following gene: 124022428
Centisome position: 24.76
GC content: 52.61
Gene sequence:
>1551_bases ATGCAGTCATGGATCCAGCCTTTGTCTGCGCTGGCTTGGCAACGACTTGGTGAATACCTGCACGAGACCCAGCTGTTGGG TTCGATTCAAAGCACCCTTTATTGGGATCAAAACACCAGGATGCCTTCTGCTGGCGCAGCTTGGCGTGGTGAGCAGCTCA GTCTTTTGGCCAAGCAACTGCATGCTCGTCAAAGCAGTCAGCAATTTGAGGGGCTGTTGGTAGAGGCTCGCGCTGAATTT GAGCAAGCTCGATTGGTGGGGGAGTTGGAGCCAATCCAAGTTGTTGGGCGAGCTCGCAACCTGGAGCTGCTTGAGCAAGA CCTGAGGCGACAGCAGCGCCTAGATCCTGCTTTGGTGGGAGCGCTCGCGACTGCGAAGTCAAAGGGATATGCCCGATGGC AGCAGGCCAGAGCCAATGCGGATTTCTCCTGCTTCGCGCCGGCTTTGCAGCATCTGATCAGCTTGCGCCAGGAACAGGCG CAGCAGCTGGCAGAACAACGCAGCTGCTGGGAAAGTTTGGCCCAACCTTTTGAGCCAGATCTGACCTTGGCGCGTTTAAA GGAGCTGTTTGCTCCATTACGTCAACGATTGCCTGATTTAGTTGAGAAGGCACGTGCTTGGACTCGTTCTCGTGCGGTGT CATTGGGATGGGATTTGCCTGACACCACTCAGCAGGATCTTTGTGAGCGCCTGCTGCAGGGATGGGGTCGGGATCTGAGC ATCACTTGCGTGGCGCGATCACCTCATCCGTTTTCAACCACCCTTGGACCTCAGGATTTTCGACTCACGACAAGAGTGGT GCCTGGGCAGCCCTTGTCTTGTTTTTTGGCCACCGCCCATGAATGGGGACACTCCCTCTATGAACAGGGTCTACCTGCTC AAAGTCATCAATGGTTCACTTGGCCGTTGGGCCAGGCCACGTCGATGGCGGTGCATGAGAGTCAGTCTCTGTTTTGGGAG AACAGAATCGCCCGCAGTAGGGCTTTTTGCGAATGCTGGTGGCCTCATTTTGCATCTGTAGGCGCGCCACTCAGCTCTGC TGATGAGCTTTGGCTGGCGATGAATCCATTAACCCCAGGCTTGAATCGCGTCGAAGCCGATGAACTCAGCTATGGCTTGC ATATTTTAATTCGAACAGATCTTGAAATTGCGCTGCTAGAAGAAGGCTTACCGGTGGAAGATTTGCCTGATCAATGGAAC CAGCGCTATAGCAATTTGCTTGGTGTGATTCCCGAAAATGATGGCGAGGGTTGTCTGCAAGATGTGCATTGGAGTGAAGG TTTATTTGGCTATTTCCCTTCTTATCTGATGGGGCATCTGATAAGTGCGCAGCTATCAGATGCGATGCAGCAGGCGATTG GACCACTTGAGGAACATGTTTCTCAAGGTAATGAGCATCAGCTGTTGGCTTGGTTGCGAGAACATGTTCACCCGATTGGC CGGATGATGAATGCTGAGCAATTGGTGGAGCATGTAACCGGAAAACCTTTATCAAGCAAGCCTTTCCTTGATTACTTAGA AGACAAGCTTGAGCATCTGCAAGAACTTTAA
Upstream 100 bases:
>100_bases GCTTTAGTTTTTTGCTTCTCTTTTACCTAACGCTTAAGGGGTAAGGGGGAGTCAAGCTCGACGAACTTTTGGCCTTAGGG CGCTCGTCTGTTTAAGGTTG
Downstream 100 bases:
>100_bases TAGATACTCCTGGCCTAGATTTGGCGCTATGTTGAAAACGTCTGCTGCCGTTACTAGATCAAATCAATTGTATTGAAGGG AAGGGCATTGGGTGAATGGC
Product: carboxypeptidase Taq (M32) metallopeptidase
Products: NA
Alternate protein names: Carboxypeptidase Taq [H]
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MQSWIQPLSALAWQRLGEYLHETQLLGSIQSTLYWDQNTRMPSAGAAWRGEQLSLLAKQLHARQSSQQFEGLLVEARAEF EQARLVGELEPIQVVGRARNLELLEQDLRRQQRLDPALVGALATAKSKGYARWQQARANADFSCFAPALQHLISLRQEQA QQLAEQRSCWESLAQPFEPDLTLARLKELFAPLRQRLPDLVEKARAWTRSRAVSLGWDLPDTTQQDLCERLLQGWGRDLS ITCVARSPHPFSTTLGPQDFRLTTRVVPGQPLSCFLATAHEWGHSLYEQGLPAQSHQWFTWPLGQATSMAVHESQSLFWE NRIARSRAFCECWWPHFASVGAPLSSADELWLAMNPLTPGLNRVEADELSYGLHILIRTDLEIALLEEGLPVEDLPDQWN QRYSNLLGVIPENDGEGCLQDVHWSEGLFGYFPSYLMGHLISAQLSDAMQQAIGPLEEHVSQGNEHQLLAWLREHVHPIG RMMNAEQLVEHVTGKPLSSKPFLDYLEDKLEHLQEL
Sequences:
>Translated_516_residues MQSWIQPLSALAWQRLGEYLHETQLLGSIQSTLYWDQNTRMPSAGAAWRGEQLSLLAKQLHARQSSQQFEGLLVEARAEF EQARLVGELEPIQVVGRARNLELLEQDLRRQQRLDPALVGALATAKSKGYARWQQARANADFSCFAPALQHLISLRQEQA QQLAEQRSCWESLAQPFEPDLTLARLKELFAPLRQRLPDLVEKARAWTRSRAVSLGWDLPDTTQQDLCERLLQGWGRDLS ITCVARSPHPFSTTLGPQDFRLTTRVVPGQPLSCFLATAHEWGHSLYEQGLPAQSHQWFTWPLGQATSMAVHESQSLFWE NRIARSRAFCECWWPHFASVGAPLSSADELWLAMNPLTPGLNRVEADELSYGLHILIRTDLEIALLEEGLPVEDLPDQWN QRYSNLLGVIPENDGEGCLQDVHWSEGLFGYFPSYLMGHLISAQLSDAMQQAIGPLEEHVSQGNEHQLLAWLREHVHPIG RMMNAEQLVEHVTGKPLSSKPFLDYLEDKLEHLQEL >Mature_516_residues MQSWIQPLSALAWQRLGEYLHETQLLGSIQSTLYWDQNTRMPSAGAAWRGEQLSLLAKQLHARQSSQQFEGLLVEARAEF EQARLVGELEPIQVVGRARNLELLEQDLRRQQRLDPALVGALATAKSKGYARWQQARANADFSCFAPALQHLISLRQEQA QQLAEQRSCWESLAQPFEPDLTLARLKELFAPLRQRLPDLVEKARAWTRSRAVSLGWDLPDTTQQDLCERLLQGWGRDLS ITCVARSPHPFSTTLGPQDFRLTTRVVPGQPLSCFLATAHEWGHSLYEQGLPAQSHQWFTWPLGQATSMAVHESQSLFWE NRIARSRAFCECWWPHFASVGAPLSSADELWLAMNPLTPGLNRVEADELSYGLHILIRTDLEIALLEEGLPVEDLPDQWN QRYSNLLGVIPENDGEGCLQDVHWSEGLFGYFPSYLMGHLISAQLSDAMQQAIGPLEEHVSQGNEHQLLAWLREHVHPIG RMMNAEQLVEHVTGKPLSSKPFLDYLEDKLEHLQEL
Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: =3.4.17.19 [H]
Molecular weight: Translated: 58581; Mature: 58581
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSWIQPLSALAWQRLGEYLHETQLLGSIQSTLYWDQNTRMPSAGAAWRGEQLSLLAKQL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHH HARQSSQQFEGLLVEARAEFEQARLVGELEPIQVVGRARNLELLEQDLRRQQRLDPALVG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH ALATAKSKGYARWQQARANADFSCFAPALQHLISLRQEQAQQLAEQRSCWESLAQPFEPD HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LTLARLKELFAPLRQRLPDLVEKARAWTRSRAVSLGWDLPDTTQQDLCERLLQGWGRDLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHCCCCEE ITCVARSPHPFSTTLGPQDFRLTTRVVPGQPLSCFLATAHEWGHSLYEQGLPAQSHQWFT EEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE WPLGQATSMAVHESQSLFWENRIARSRAFCECWWPHFASVGAPLSSADELWLAMNPLTPG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC LNRVEADELSYGLHILIRTDLEIALLEEGLPVEDLPDQWNQRYSNLLGVIPENDGEGCLQ CCCCCHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHH DVHWSEGLFGYFPSYLMGHLISAQLSDAMQQAIGPLEEHVSQGNEHQLLAWLREHVHPIG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHH RMMNAEQLVEHVTGKPLSSKPFLDYLEDKLEHLQEL HHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MQSWIQPLSALAWQRLGEYLHETQLLGSIQSTLYWDQNTRMPSAGAAWRGEQLSLLAKQL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHH HARQSSQQFEGLLVEARAEFEQARLVGELEPIQVVGRARNLELLEQDLRRQQRLDPALVG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH ALATAKSKGYARWQQARANADFSCFAPALQHLISLRQEQAQQLAEQRSCWESLAQPFEPD HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LTLARLKELFAPLRQRLPDLVEKARAWTRSRAVSLGWDLPDTTQQDLCERLLQGWGRDLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHCCCCEE ITCVARSPHPFSTTLGPQDFRLTTRVVPGQPLSCFLATAHEWGHSLYEQGLPAQSHQWFT EEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE WPLGQATSMAVHESQSLFWENRIARSRAFCECWWPHFASVGAPLSSADELWLAMNPLTPG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC LNRVEADELSYGLHILIRTDLEIALLEEGLPVEDLPDQWNQRYSNLLGVIPENDGEGCLQ CCCCCHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHH DVHWSEGLFGYFPSYLMGHLISAQLSDAMQQAIGPLEEHVSQGNEHQLLAWLREHVHPIG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHH RMMNAEQLVEHVTGKPLSSKPFLDYLEDKLEHLQEL HHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765282; 1369078 [H]