| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is thiP [H]
Identifier: 124022417
GI number: 124022417
Start: 658660
End: 660261
Strand: Reverse
Name: thiP [H]
Synonym: P9303_07081
Alternate gene names: 124022417
Gene position: 660261-658660 (Counterclockwise)
Preceding gene: 124022419
Following gene: 124022416
Centisome position: 24.61
GC content: 55.37
Gene sequence:
>1602_bases ATGACCCAAGACGCCGTCCCGTCAAGCTACGGCTCGAACCGCCTGCGCAAACGCCATTGGCAACCAGACCGCCTGCTTCT CAACAGCATGGCAATTCTGCTTGCTGTACTTGCTCTCTGGCCTCTGATTGGTCTGATCCGTGAAGCACTGCAGGGATTCA TCAATGGATCGGCCAGCCTGGGAGTCGATGGCCCACAACAGATTCAAGGGACCTTGACTCTGCTGATCGGGACATCCTTA TTGGGTGGCCTACTGGGAACTGCAAACGGCTGGTTATTAGCAAACTGCCGCTTCCCAGGACGTCGAGCCCTACGAGTGGC TCAGCTATTGCCCCTCGCCACACCCGCCTACCTACTCTCGGCCATCCTGATCGATCTTGGCAGTCGCAATGCCATACGAA TTCATGGCATGGGCTGGGGGATTTTGATCATGGCGCTGACAACCTATCCCTACGTTTTTCTCCTCAGCACTGAAAGCTTT TCAATCTGCGGACGCCGCCAACTGGAAGCCTGCCGCAGTCTTGGGGTTGGACCGTGGAACAGTTTTCGACGCATTGCTCT GCCCATGGCTTTGCCAGCGATTGGTGCCGGGATTGCCCTGATGGGCATGGAAGTCGTCAATGAACTCGGGGCCGTAGCAC TACTCGCCATCCCAAGCCTGTCAGCTGGCATCGTTGAGACCTGGCAAATGGAAGGCAATCCTGCCGGTGCCATTGGACTA GCAATGATCGCGCTGATCATCGTGATGTCACTGGTGGGGTATGAACGCAGACTGAGACGACGAAGCCGCCGCTGGACAGA GGGTGTCGCTGGTGGCGATTCTCCAGCCTGGCAGCTGCACGGTGTACGAGCCCTGTGCGCTCAGTGCCTAGCCCTCATTC CTCCCACGATCACTTTGGGTGTGCCCCTGCTGTGGGCCATCCTCAATCTCGATCAACTCGAACAAGGGATAGATCCTGAT CTAATCCCACTGACAGAACGCAGTCTTGGACTTGGGCTGGCAGCAGCAAGCCTGGCCGTGGTAGCAGGTCTGATCCTTGC AATCGCCAAGCGTTGGTCATCAACACGCTGGATGGGCAACCTCTCATTTATGGCAGGTATTGGTTATGCCATTCCAGGAG CTGTGATGGCCATTGCGCTGATGCCATTCAACGGTGCTCCATGGAACCTCGCATGGATTCTGCTGCTGCTGTGGGGCTAT AGCGATCGCTTCTTGGCAGTTGCAAAAGGAGGACTCGACGCTGCCTTCGAGCGCCTTTCCCCAAGCCTGGATGAAGCCGC TACTGGACTTGGCTGTCAATGGCAGGAGGTGCTTCGACGCGTTCATCTGCCTTTACTGAAAGGTCCACTAGCGGTAGGAG CACTTTTGGTTTTTGTCGACACGGTTAAAGAACTACCTCTCACATTTGTCCTGAGACCATTTGATTTCGACACCCTTTCT GTACGGCTCTACCAATACGCCGCAGATGAACGCATGGCGGAATCCATCTTGCCAGCACTGATTATCATCGCTCTGGGATT AATCGCTTCGCTGGCATTGGTCCCAGGGCTCGATCAAGGGGAACGAAAAAAGCCTCCTTTAAGTAAAGAACCACTCACTT AG
Upstream 100 bases:
>100_bases TCTTCACCGCTGCAGAACTCTGCCAATGCCACCCAACTTCGCTTGCTCAACATCAAAACCTTCTCCCTGATGGCCTCTAA CGGTTGAGATTGATCGCCTG
Downstream 100 bases:
>100_bases TTTTCAATACTTCAAATGATCGTCAACAAGAGTTTTGGGTCGGTTTCAGGAAGGCAGACCCCATTCAAAACCACAGACTC ATAACAAGCGAGAATTGCGA
Product: iron ABC transporter
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MTQDAVPSSYGSNRLRKRHWQPDRLLLNSMAILLAVLALWPLIGLIREALQGFINGSASLGVDGPQQIQGTLTLLIGTSL LGGLLGTANGWLLANCRFPGRRALRVAQLLPLATPAYLLSAILIDLGSRNAIRIHGMGWGILIMALTTYPYVFLLSTESF SICGRRQLEACRSLGVGPWNSFRRIALPMALPAIGAGIALMGMEVVNELGAVALLAIPSLSAGIVETWQMEGNPAGAIGL AMIALIIVMSLVGYERRLRRRSRRWTEGVAGGDSPAWQLHGVRALCAQCLALIPPTITLGVPLLWAILNLDQLEQGIDPD LIPLTERSLGLGLAAASLAVVAGLILAIAKRWSSTRWMGNLSFMAGIGYAIPGAVMAIALMPFNGAPWNLAWILLLLWGY SDRFLAVAKGGLDAAFERLSPSLDEAATGLGCQWQEVLRRVHLPLLKGPLAVGALLVFVDTVKELPLTFVLRPFDFDTLS VRLYQYAADERMAESILPALIIIALGLIASLALVPGLDQGERKKPPLSKEPLT
Sequences:
>Translated_533_residues MTQDAVPSSYGSNRLRKRHWQPDRLLLNSMAILLAVLALWPLIGLIREALQGFINGSASLGVDGPQQIQGTLTLLIGTSL LGGLLGTANGWLLANCRFPGRRALRVAQLLPLATPAYLLSAILIDLGSRNAIRIHGMGWGILIMALTTYPYVFLLSTESF SICGRRQLEACRSLGVGPWNSFRRIALPMALPAIGAGIALMGMEVVNELGAVALLAIPSLSAGIVETWQMEGNPAGAIGL AMIALIIVMSLVGYERRLRRRSRRWTEGVAGGDSPAWQLHGVRALCAQCLALIPPTITLGVPLLWAILNLDQLEQGIDPD LIPLTERSLGLGLAAASLAVVAGLILAIAKRWSSTRWMGNLSFMAGIGYAIPGAVMAIALMPFNGAPWNLAWILLLLWGY SDRFLAVAKGGLDAAFERLSPSLDEAATGLGCQWQEVLRRVHLPLLKGPLAVGALLVFVDTVKELPLTFVLRPFDFDTLS VRLYQYAADERMAESILPALIIIALGLIASLALVPGLDQGERKKPPLSKEPLT >Mature_532_residues TQDAVPSSYGSNRLRKRHWQPDRLLLNSMAILLAVLALWPLIGLIREALQGFINGSASLGVDGPQQIQGTLTLLIGTSLL GGLLGTANGWLLANCRFPGRRALRVAQLLPLATPAYLLSAILIDLGSRNAIRIHGMGWGILIMALTTYPYVFLLSTESFS ICGRRQLEACRSLGVGPWNSFRRIALPMALPAIGAGIALMGMEVVNELGAVALLAIPSLSAGIVETWQMEGNPAGAIGLA MIALIIVMSLVGYERRLRRRSRRWTEGVAGGDSPAWQLHGVRALCAQCLALIPPTITLGVPLLWAILNLDQLEQGIDPDL IPLTERSLGLGLAAASLAVVAGLILAIAKRWSSTRWMGNLSFMAGIGYAIPGAVMAIALMPFNGAPWNLAWILLLLWGYS DRFLAVAKGGLDAAFERLSPSLDEAATGLGCQWQEVLRRVHLPLLKGPLAVGALLVFVDTVKELPLTFVLRPFDFDTLSV RLYQYAADERMAESILPALIIIALGLIASLALVPGLDQGERKKPPLSKEPLT
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=169, Percent_Identity=30.1775147928994, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 57232; Mature: 57101
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDAVPSSYGSNRLRKRHWQPDRLLLNSMAILLAVLALWPLIGLIREALQGFINGSASL CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GVDGPQQIQGTLTLLIGTSLLGGLLGTANGWLLANCRFPGRRALRVAQLLPLATPAYLLS CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHH AILIDLGSRNAIRIHGMGWGILIMALTTYPYVFLLSTESFSICGRRQLEACRSLGVGPWN HHHHHCCCCCEEEEECCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCH SFRRIALPMALPAIGAGIALMGMEVVNELGAVALLAIPSLSAGIVETWQMEGNPAGAIGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCHHHH AMIALIIVMSLVGYERRLRRRSRRWTEGVAGGDSPAWQLHGVRALCAQCLALIPPTITLG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH VPLLWAILNLDQLEQGIDPDLIPLTERSLGLGLAAASLAVVAGLILAIAKRWSSTRWMGN HHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LSFMAGIGYAIPGAVMAIALMPFNGAPWNLAWILLLLWGYSDRFLAVAKGGLDAAFERLS HHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHC PSLDEAATGLGCQWQEVLRRVHLPLLKGPLAVGALLVFVDTVKELPLTFVLRPFDFDTLS CCHHHHHCCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHH VRLYQYAADERMAESILPALIIIALGLIASLALVPGLDQGERKKPPLSKEPLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQDAVPSSYGSNRLRKRHWQPDRLLLNSMAILLAVLALWPLIGLIREALQGFINGSASL CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GVDGPQQIQGTLTLLIGTSLLGGLLGTANGWLLANCRFPGRRALRVAQLLPLATPAYLLS CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHH AILIDLGSRNAIRIHGMGWGILIMALTTYPYVFLLSTESFSICGRRQLEACRSLGVGPWN HHHHHCCCCCEEEEECCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCH SFRRIALPMALPAIGAGIALMGMEVVNELGAVALLAIPSLSAGIVETWQMEGNPAGAIGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCHHHH AMIALIIVMSLVGYERRLRRRSRRWTEGVAGGDSPAWQLHGVRALCAQCLALIPPTITLG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH VPLLWAILNLDQLEQGIDPDLIPLTERSLGLGLAAASLAVVAGLILAIAKRWSSTRWMGN HHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LSFMAGIGYAIPGAVMAIALMPFNGAPWNLAWILLLLWGYSDRFLAVAKGGLDAAFERLS HHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHC PSLDEAATGLGCQWQEVLRRVHLPLLKGPLAVGALLVFVDTVKELPLTFVLRPFDFDTLS CCHHHHHCCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHH VRLYQYAADERMAESILPALIIIALGLIASLALVPGLDQGERKKPPLSKEPLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]