| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124022409
Identifier: 124022409
GI number: 124022409
Start: 652714
End: 653517
Strand: Reverse
Name: 124022409
Synonym: P9303_07001
Alternate gene names: NA
Gene position: 653517-652714 (Counterclockwise)
Preceding gene: 124022415
Following gene: 124022407
Centisome position: 24.36
GC content: 52.86
Gene sequence:
>804_bases ATGATCCTTCTGATCACTGGGCTCATGACCGCCTCAGCACTGGCCTGGTTTGGAGCGCAATTGATCGCACCTGAGTCAAG AGCTCTAGGCAATCGGGAGATCCTCAATCGGCAGGTGAAAGATCTGCTAGATCAACAAAATAATGGTGATCTGAACACAG AAGAACAGCAGAAGCTGCTGGAGCGATTGCTGGTCCTAGGTCGCAACGAGGAAGCAATGACCCAAATTGAACTGCTAATG GCCAGGCAGCCAAAAACCTGGTTATGGAAGTTGATGCTCGCGGAACTCAAGCGCGAACAGGGAGATCGCGATGGAGCCCG GAAGGACATCAACCAGCTAATGACCATCCAGCCTCACAACCTCGAGGTCCTGCAACTGAAGATCTTGCTTGACCTAGAGG CCGGGAGAGAAAAAGCCGCCGTTGCTGAACTCAAAAAGAGATTTGAGTCCAAAACGAAAGGCAAGCGCATACCCATAGGG CTTCTCCTGGCAGATTTGCAGCGCCAGACAGGACAAACCAAGGCTGCCGCTGCGCTCTATCGCGTTCTATCGAATGAGTC ACCAACAGATGCACGTCCCTTGCTCGCTCTTGCTCTCATGCGGCAGGAGCAAGGCCAAGACCAGCAAGCACAAACTCTGC TTCAAGAAGCTAGAGAACGCCGTAAAAAACCAGGCGAAGCCGATCCCCTGATTGATGGCCTGGCGAGTCAGTGGAGGCTT AACTCAATCCGCACAAAAGGTTCAAACAGTGTCCTCAGGGCTGATTCGCCGAAGCCTCAGAACTCTCCAATTCCAGGGCC TTGA
Upstream 100 bases:
>100_bases TTGGAAATCTAGCCAGCATTCGTGAACCGTCCCAGACTGACCAGGTAATTTTCTGCTCGCTGAAGTGCTTAAGCCCGAAA GGATTTTGCCCTCCCGCGGG
Downstream 100 bases:
>100_bases GGGCTGCATCGATTGCATCAGAAGGAACTGTGGCATCGTCCATTGCTGTGGACCTTCGCAAACGATTCATAAGGTCCATC GGATTGGTGGCATCGAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MILLITGLMTASALAWFGAQLIAPESRALGNREILNRQVKDLLDQQNNGDLNTEEQQKLLERLLVLGRNEEAMTQIELLM ARQPKTWLWKLMLAELKREQGDRDGARKDINQLMTIQPHNLEVLQLKILLDLEAGREKAAVAELKKRFESKTKGKRIPIG LLLADLQRQTGQTKAAAALYRVLSNESPTDARPLLALALMRQEQGQDQQAQTLLQEARERRKKPGEADPLIDGLASQWRL NSIRTKGSNSVLRADSPKPQNSPIPGP
Sequences:
>Translated_267_residues MILLITGLMTASALAWFGAQLIAPESRALGNREILNRQVKDLLDQQNNGDLNTEEQQKLLERLLVLGRNEEAMTQIELLM ARQPKTWLWKLMLAELKREQGDRDGARKDINQLMTIQPHNLEVLQLKILLDLEAGREKAAVAELKKRFESKTKGKRIPIG LLLADLQRQTGQTKAAAALYRVLSNESPTDARPLLALALMRQEQGQDQQAQTLLQEARERRKKPGEADPLIDGLASQWRL NSIRTKGSNSVLRADSPKPQNSPIPGP >Mature_267_residues MILLITGLMTASALAWFGAQLIAPESRALGNREILNRQVKDLLDQQNNGDLNTEEQQKLLERLLVLGRNEEAMTQIELLM ARQPKTWLWKLMLAELKREQGDRDGARKDINQLMTIQPHNLEVLQLKILLDLEAGREKAAVAELKKRFESKTKGKRIPIG LLLADLQRQTGQTKAAAALYRVLSNESPTDARPLLALALMRQEQGQDQQAQTLLQEARERRKKPGEADPLIDGLASQWRL NSIRTKGSNSVLRADSPKPQNSPIPGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29966; Mature: 29966
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLITGLMTASALAWFGAQLIAPESRALGNREILNRQVKDLLDQQNNGDLNTEEQQKLL CEEEEEHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH ERLLVLGRNEEAMTQIELLMARQPKTWLWKLMLAELKREQGDRDGARKDINQLMTIQPHN HHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC LEVLQLKILLDLEAGREKAAVAELKKRFESKTKGKRIPIGLLLADLQRQTGQTKAAAALY CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH RVLSNESPTDARPLLALALMRQEQGQDQQAQTLLQEARERRKKPGEADPLIDGLASQWRL HHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH NSIRTKGSNSVLRADSPKPQNSPIPGP HHHHCCCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure MILLITGLMTASALAWFGAQLIAPESRALGNREILNRQVKDLLDQQNNGDLNTEEQQKLL CEEEEEHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH ERLLVLGRNEEAMTQIELLMARQPKTWLWKLMLAELKREQGDRDGARKDINQLMTIQPHN HHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC LEVLQLKILLDLEAGREKAAVAELKKRFESKTKGKRIPIGLLLADLQRQTGQTKAAAALY CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH RVLSNESPTDARPLLALALMRQEQGQDQQAQTLLQEARERRKKPGEADPLIDGLASQWRL HHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH NSIRTKGSNSVLRADSPKPQNSPIPGP HHHHCCCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA