| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022398
Identifier: 124022398
GI number: 124022398
Start: 643339
End: 643782
Strand: Reverse
Name: 124022398
Synonym: P9303_06891
Alternate gene names: NA
Gene position: 643782-643339 (Counterclockwise)
Preceding gene: 124022400
Following gene: 124022394
Centisome position: 24.0
GC content: 56.98
Gene sequence:
>444_bases TTGCCTTCTCCTACCTGGATTCCTCTGATCTGGCTCGCCGTAGCTGGCCTACTCCTAGCCATTGAGCTGGCTCAACCGAG CTTCGATGGCCTGATGTTCGCAGCGCTTGGGGCCTTAGTGGTATCGATTTTGACTGCAATCACTCCCATGCCACTGATTG TGCAGATGATCTTCTTCCTGCTGATCACGGTTTTAGGGACTCTCTGGCTAACTCGTTGGTCAGCCCGCCGCAACCCCAGT CCAGGTGGGCTTCGCCAACGCGAGGATATCGCCGAAGTTCTAACGCCAATCAAAGCTGGAGGAGATGGGCGTGTGCGTTG GCATGGGCAAAGCTGGGCCGCCAGTTCGATCGACCTGGAGACTCCAATAAACGCCGGTGATCAGGTCGTAGTGATGGGCC GTGAAGGCACACAACTACAGGTTCTGCCACTGCCGCGTCGCTGA
Upstream 100 bases:
>100_bases GTGTAAGCAAACCCTAGGTCCGTAAACGAACCACGGCAAAGCCCTTCCAAACAGCTTTCTCTTCTCCAAAGTAGATAGAG AAAGCCCTGCGCCCTATCCC
Downstream 100 bases:
>100_bases ACTCAATCAAAGAACAAAAGACTCACAACCTTGCCCATATCCTCAGCACTGCGACAACTGGTCAATAACGTCTCACTGTC ATGGAAAGCAAAGCAGATCA
Product: membrane protein implicated in regulation of membrane protease activity
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPSPTWIPLIWLAVAGLLLAIELAQPSFDGLMFAALGALVVSILTAITPMPLIVQMIFFLLITVLGTLWLTRWSARRNPS PGGLRQREDIAEVLTPIKAGGDGRVRWHGQSWAASSIDLETPINAGDQVVVMGREGTQLQVLPLPRR
Sequences:
>Translated_147_residues MPSPTWIPLIWLAVAGLLLAIELAQPSFDGLMFAALGALVVSILTAITPMPLIVQMIFFLLITVLGTLWLTRWSARRNPS PGGLRQREDIAEVLTPIKAGGDGRVRWHGQSWAASSIDLETPINAGDQVVVMGREGTQLQVLPLPRR >Mature_146_residues PSPTWIPLIWLAVAGLLLAIELAQPSFDGLMFAALGALVVSILTAITPMPLIVQMIFFLLITVLGTLWLTRWSARRNPSP GGLRQREDIAEVLTPIKAGGDGRVRWHGQSWAASSIDLETPINAGDQVVVMGREGTQLQVLPLPRR
Specific function: Unknown
COG id: COG1585
COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16000; Mature: 15869
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPTWIPLIWLAVAGLLLAIELAQPSFDGLMFAALGALVVSILTAITPMPLIVQMIFFL CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LITVLGTLWLTRWSARRNPSPGGLRQREDIAEVLTPIKAGGDGRVRWHGQSWAASSIDLE HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC TPINAGDQVVVMGREGTQLQVLPLPRR CCCCCCCEEEEECCCCCEEEEEECCCC >Mature Secondary Structure PSPTWIPLIWLAVAGLLLAIELAQPSFDGLMFAALGALVVSILTAITPMPLIVQMIFFL CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LITVLGTLWLTRWSARRNPSPGGLRQREDIAEVLTPIKAGGDGRVRWHGQSWAASSIDLE HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC TPINAGDQVVVMGREGTQLQVLPLPRR CCCCCCCEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA