| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is lgt
Identifier: 124022372
GI number: 124022372
Start: 623703
End: 624617
Strand: Reverse
Name: lgt
Synonym: P9303_06631
Alternate gene names: 124022372
Gene position: 624617-623703 (Counterclockwise)
Preceding gene: 124022373
Following gene: 124022371
Centisome position: 23.28
GC content: 51.8
Gene sequence:
>915_bases ATGGACGCATTCATCGCGACCTTTACCTCTCCAGGGCCCGAGCTCTTTCAGCTCGGGCCCTTTGCCTTGCGGTGGTATGG ATTGCTGATTGCCATCGCCGTACTGATCGGCCTCAATCTGTCCAGCAGCCTGGCCCGTAAACGAGGCCTTGAGCAGGGCT TGATCAGTGATCTGCTGCCCATTCTCGTATTAACTGCCGTTGTTGGAGCACGCATCTACTACGTCGCATTTGAGTGGAGG AACTACAGCGGAGACAATTTTTGGAGCTCGATCAATATCTTTGGACTCGCCATACCAATCCCAAGTGCCATGGAAATTTG GGGTGGAGGAATCGCTATTCATGGAGCACTGCTTTCTGGCACCCTTGCAGTGTTGATCTTCTGCCGTTGGCGTCGCCAAG CCTTCTGGGATGTTCTTGATGTGCTTGTCCCATCCATTGCCCTTGGCCAGGCAATTGGACGCTGGGGAAATTTTTTCAAC AACGAAGCTTTCGGTGTTCCAATCAAGGGCGACCTTGCTTGGAAATTGTTCATCCCATTCGTGAATCGTCCACTTAATTA TGCCAATAACGAGTTTTTCCATCCCACATTCCTCTACGAATCAATTTGGAATCTTCTAGTCTTCACACTGCTAATTGTTC TTTTTCAACGCAGCAACAAAGGGCTACTGAAGCTCCCCGCCGGTGCGTTGAGCTGCATCTACTTGATCACTTACAGCCTC GGCAGAGTCTGGATCGAAGCACTTCGAACGGATCCCCTCTGCCTAGGCGCCTTACCACCTTCCTGTGAAGGGGGCCTGCG TATTGCCCAGCTGATGAGTTTGGCGATGATGGCAGTTGGAGGTTTTGGCCTCTGGTGGCTCTATGGTCGCAAACGAAAGC TACCGGACCCAGGTAGGCCTAAGTCATTCGCTTGA
Upstream 100 bases:
>100_bases TAGCAGTTTCTCTCGCTCAGATCTTACTTGTATTGAAGAAGAAGCAAGTCGAAAAAGTTCAGGCTGCTGAGGGGATCTGA TCCCCATCCATCTCAACTCA
Downstream 100 bases:
>100_bases TGAGCAGAATCTCCATCGTTGGTGCAGGTCCAGGCGCGACTGATCTGCTAACACTGCGTGCCGCAGAACATCTCAAGCAG GCTGAGGTCCTTGTATGGAC
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MDAFIATFTSPGPELFQLGPFALRWYGLLIAIAVLIGLNLSSSLARKRGLEQGLISDLLPILVLTAVVGARIYYVAFEWR NYSGDNFWSSINIFGLAIPIPSAMEIWGGGIAIHGALLSGTLAVLIFCRWRRQAFWDVLDVLVPSIALGQAIGRWGNFFN NEAFGVPIKGDLAWKLFIPFVNRPLNYANNEFFHPTFLYESIWNLLVFTLLIVLFQRSNKGLLKLPAGALSCIYLITYSL GRVWIEALRTDPLCLGALPPSCEGGLRIAQLMSLAMMAVGGFGLWWLYGRKRKLPDPGRPKSFA
Sequences:
>Translated_304_residues MDAFIATFTSPGPELFQLGPFALRWYGLLIAIAVLIGLNLSSSLARKRGLEQGLISDLLPILVLTAVVGARIYYVAFEWR NYSGDNFWSSINIFGLAIPIPSAMEIWGGGIAIHGALLSGTLAVLIFCRWRRQAFWDVLDVLVPSIALGQAIGRWGNFFN NEAFGVPIKGDLAWKLFIPFVNRPLNYANNEFFHPTFLYESIWNLLVFTLLIVLFQRSNKGLLKLPAGALSCIYLITYSL GRVWIEALRTDPLCLGALPPSCEGGLRIAQLMSLAMMAVGGFGLWWLYGRKRKLPDPGRPKSFA >Mature_304_residues MDAFIATFTSPGPELFQLGPFALRWYGLLIAIAVLIGLNLSSSLARKRGLEQGLISDLLPILVLTAVVGARIYYVAFEWR NYSGDNFWSSINIFGLAIPIPSAMEIWGGGIAIHGALLSGTLAVLIFCRWRRQAFWDVLDVLVPSIALGQAIGRWGNFFN NEAFGVPIKGDLAWKLFIPFVNRPLNYANNEFFHPTFLYESIWNLLVFTLLIVLFQRSNKGLLKLPAGALSCIYLITYSL GRVWIEALRTDPLCLGALPPSCEGGLRIAQLMSLAMMAVGGFGLWWLYGRKRKLPDPGRPKSFA
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=309, Percent_Identity=26.537216828479, Blast_Score=89, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_PROM3 (A2C7F4)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016679.1 - STRING: A2C7F4 - GeneID: 4777405 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_06631 - eggNOG: COG0682 - HOGENOM: HBG450278 - OMA: CARAYYV - ProtClustDB: PRK00052 - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 33744; Mature: 33744
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x150107b4)-; HASH(0x11f5ad0c)-; HASH(0x141cb854)-; HASH(0x148729a4)-; HASH(0x13f22ab8)-; HASH(0x14934a48)-; HASH(0x150e3598)-;
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAFIATFTSPGPELFQLGPFALRWYGLLIAIAVLIGLNLSSSLARKRGLEQGLISDLLP CCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHH ILVLTAVVGARIYYVAFEWRNYSGDNFWSSINIFGLAIPIPSAMEIWGGGIAIHGALLSG HHHHHHHHHCEEEEEEEEECCCCCCCHHHHEEEEEEEECCCHHHHHCCCCCEEHHHHHHH TLAVLIFCRWRRQAFWDVLDVLVPSIALGQAIGRWGNFFNNEAFGVPIKGDLAWKLFIPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHH VNRPLNYANNEFFHPTFLYESIWNLLVFTLLIVLFQRSNKGLLKLPAGALSCIYLITYSL HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHH GRVWIEALRTDPLCLGALPPSCEGGLRIAQLMSLAMMAVGGFGLWWLYGRKRKLPDPGRP HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCC KSFA CCCH >Mature Secondary Structure MDAFIATFTSPGPELFQLGPFALRWYGLLIAIAVLIGLNLSSSLARKRGLEQGLISDLLP CCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHH ILVLTAVVGARIYYVAFEWRNYSGDNFWSSINIFGLAIPIPSAMEIWGGGIAIHGALLSG HHHHHHHHHCEEEEEEEEECCCCCCCHHHHEEEEEEEECCCHHHHHCCCCCEEHHHHHHH TLAVLIFCRWRRQAFWDVLDVLVPSIALGQAIGRWGNFFNNEAFGVPIKGDLAWKLFIPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHH VNRPLNYANNEFFHPTFLYESIWNLLVFTLLIVLFQRSNKGLLKLPAGALSCIYLITYSL HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHH GRVWIEALRTDPLCLGALPPSCEGGLRIAQLMSLAMMAVGGFGLWWLYGRKRKLPDPGRP HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCC KSFA CCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA