Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is lgt

Identifier: 124022372

GI number: 124022372

Start: 623703

End: 624617

Strand: Reverse

Name: lgt

Synonym: P9303_06631

Alternate gene names: 124022372

Gene position: 624617-623703 (Counterclockwise)

Preceding gene: 124022373

Following gene: 124022371

Centisome position: 23.28

GC content: 51.8

Gene sequence:

>915_bases
ATGGACGCATTCATCGCGACCTTTACCTCTCCAGGGCCCGAGCTCTTTCAGCTCGGGCCCTTTGCCTTGCGGTGGTATGG
ATTGCTGATTGCCATCGCCGTACTGATCGGCCTCAATCTGTCCAGCAGCCTGGCCCGTAAACGAGGCCTTGAGCAGGGCT
TGATCAGTGATCTGCTGCCCATTCTCGTATTAACTGCCGTTGTTGGAGCACGCATCTACTACGTCGCATTTGAGTGGAGG
AACTACAGCGGAGACAATTTTTGGAGCTCGATCAATATCTTTGGACTCGCCATACCAATCCCAAGTGCCATGGAAATTTG
GGGTGGAGGAATCGCTATTCATGGAGCACTGCTTTCTGGCACCCTTGCAGTGTTGATCTTCTGCCGTTGGCGTCGCCAAG
CCTTCTGGGATGTTCTTGATGTGCTTGTCCCATCCATTGCCCTTGGCCAGGCAATTGGACGCTGGGGAAATTTTTTCAAC
AACGAAGCTTTCGGTGTTCCAATCAAGGGCGACCTTGCTTGGAAATTGTTCATCCCATTCGTGAATCGTCCACTTAATTA
TGCCAATAACGAGTTTTTCCATCCCACATTCCTCTACGAATCAATTTGGAATCTTCTAGTCTTCACACTGCTAATTGTTC
TTTTTCAACGCAGCAACAAAGGGCTACTGAAGCTCCCCGCCGGTGCGTTGAGCTGCATCTACTTGATCACTTACAGCCTC
GGCAGAGTCTGGATCGAAGCACTTCGAACGGATCCCCTCTGCCTAGGCGCCTTACCACCTTCCTGTGAAGGGGGCCTGCG
TATTGCCCAGCTGATGAGTTTGGCGATGATGGCAGTTGGAGGTTTTGGCCTCTGGTGGCTCTATGGTCGCAAACGAAAGC
TACCGGACCCAGGTAGGCCTAAGTCATTCGCTTGA

Upstream 100 bases:

>100_bases
TAGCAGTTTCTCTCGCTCAGATCTTACTTGTATTGAAGAAGAAGCAAGTCGAAAAAGTTCAGGCTGCTGAGGGGATCTGA
TCCCCATCCATCTCAACTCA

Downstream 100 bases:

>100_bases
TGAGCAGAATCTCCATCGTTGGTGCAGGTCCAGGCGCGACTGATCTGCTAACACTGCGTGCCGCAGAACATCTCAAGCAG
GCTGAGGTCCTTGTATGGAC

Product: prolipoprotein diacylglyceryl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MDAFIATFTSPGPELFQLGPFALRWYGLLIAIAVLIGLNLSSSLARKRGLEQGLISDLLPILVLTAVVGARIYYVAFEWR
NYSGDNFWSSINIFGLAIPIPSAMEIWGGGIAIHGALLSGTLAVLIFCRWRRQAFWDVLDVLVPSIALGQAIGRWGNFFN
NEAFGVPIKGDLAWKLFIPFVNRPLNYANNEFFHPTFLYESIWNLLVFTLLIVLFQRSNKGLLKLPAGALSCIYLITYSL
GRVWIEALRTDPLCLGALPPSCEGGLRIAQLMSLAMMAVGGFGLWWLYGRKRKLPDPGRPKSFA

Sequences:

>Translated_304_residues
MDAFIATFTSPGPELFQLGPFALRWYGLLIAIAVLIGLNLSSSLARKRGLEQGLISDLLPILVLTAVVGARIYYVAFEWR
NYSGDNFWSSINIFGLAIPIPSAMEIWGGGIAIHGALLSGTLAVLIFCRWRRQAFWDVLDVLVPSIALGQAIGRWGNFFN
NEAFGVPIKGDLAWKLFIPFVNRPLNYANNEFFHPTFLYESIWNLLVFTLLIVLFQRSNKGLLKLPAGALSCIYLITYSL
GRVWIEALRTDPLCLGALPPSCEGGLRIAQLMSLAMMAVGGFGLWWLYGRKRKLPDPGRPKSFA
>Mature_304_residues
MDAFIATFTSPGPELFQLGPFALRWYGLLIAIAVLIGLNLSSSLARKRGLEQGLISDLLPILVLTAVVGARIYYVAFEWR
NYSGDNFWSSINIFGLAIPIPSAMEIWGGGIAIHGALLSGTLAVLIFCRWRRQAFWDVLDVLVPSIALGQAIGRWGNFFN
NEAFGVPIKGDLAWKLFIPFVNRPLNYANNEFFHPTFLYESIWNLLVFTLLIVLFQRSNKGLLKLPAGALSCIYLITYSL
GRVWIEALRTDPLCLGALPPSCEGGLRIAQLMSLAMMAVGGFGLWWLYGRKRKLPDPGRPKSFA

Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins

COG id: COG0682

COG function: function code M; Prolipoprotein diacylglyceryltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lgt family

Homologues:

Organism=Escherichia coli, GI1789192, Length=309, Percent_Identity=26.537216828479, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LGT_PROM3 (A2C7F4)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001016679.1
- STRING:   A2C7F4
- GeneID:   4777405
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_06631
- eggNOG:   COG0682
- HOGENOM:   HBG450278
- OMA:   CARAYYV
- ProtClustDB:   PRK00052
- HAMAP:   MF_01147
- InterPro:   IPR001640
- TIGRFAMs:   TIGR00544

Pfam domain/function: PF01790 LGT

EC number: 2.4.99.- [C]

Molecular weight: Translated: 33744; Mature: 33744

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS01311 LGT

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x150107b4)-; HASH(0x11f5ad0c)-; HASH(0x141cb854)-; HASH(0x148729a4)-; HASH(0x13f22ab8)-; HASH(0x14934a48)-; HASH(0x150e3598)-;

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAFIATFTSPGPELFQLGPFALRWYGLLIAIAVLIGLNLSSSLARKRGLEQGLISDLLP
CCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHH
ILVLTAVVGARIYYVAFEWRNYSGDNFWSSINIFGLAIPIPSAMEIWGGGIAIHGALLSG
HHHHHHHHHCEEEEEEEEECCCCCCCHHHHEEEEEEEECCCHHHHHCCCCCEEHHHHHHH
TLAVLIFCRWRRQAFWDVLDVLVPSIALGQAIGRWGNFFNNEAFGVPIKGDLAWKLFIPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHH
VNRPLNYANNEFFHPTFLYESIWNLLVFTLLIVLFQRSNKGLLKLPAGALSCIYLITYSL
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHH
GRVWIEALRTDPLCLGALPPSCEGGLRIAQLMSLAMMAVGGFGLWWLYGRKRKLPDPGRP
HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCC
KSFA
CCCH
>Mature Secondary Structure
MDAFIATFTSPGPELFQLGPFALRWYGLLIAIAVLIGLNLSSSLARKRGLEQGLISDLLP
CCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHH
ILVLTAVVGARIYYVAFEWRNYSGDNFWSSINIFGLAIPIPSAMEIWGGGIAIHGALLSG
HHHHHHHHHCEEEEEEEEECCCCCCCHHHHEEEEEEEECCCHHHHHCCCCCEEHHHHHHH
TLAVLIFCRWRRQAFWDVLDVLVPSIALGQAIGRWGNFFNNEAFGVPIKGDLAWKLFIPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHH
VNRPLNYANNEFFHPTFLYESIWNLLVFTLLIVLFQRSNKGLLKLPAGALSCIYLITYSL
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHH
GRVWIEALRTDPLCLGALPPSCEGGLRIAQLMSLAMMAVGGFGLWWLYGRKRKLPDPGRP
HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCC
KSFA
CCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA